BLASTX nr result

ID: Bupleurum21_contig00023074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023074
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001169212.1| uncharacterized protein LOC100383068 [Zea ma...   142   3e-32
ref|NP_001235607.1| uncharacterized protein LOC100306221 [Glycin...   142   4e-32
ref|XP_002451946.1| hypothetical protein SORBIDRAFT_04g010410 [S...   141   6e-32
ref|XP_002303294.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
ref|XP_002516012.1| Cytochrome c-type biogenesis protein cycL pr...   139   2e-31

>ref|NP_001169212.1| uncharacterized protein LOC100383068 [Zea mays]
           gi|195613152|gb|ACG28406.1| cytochrome c-type biogenesis
           protein cycL precursor [Zea mays]
           gi|223975477|gb|ACN31926.1| unknown [Zea mays]
           gi|223975557|gb|ACN31966.1| unknown [Zea mays]
           gi|413936370|gb|AFW70921.1| cytochrome c-type biogenesis
           protein cycL isoform 1 [Zea mays]
           gi|413936371|gb|AFW70922.1| cytochrome c-type biogenesis
           protein cycL isoform 2 [Zea mays]
          Length = 152

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/78 (85%), Positives = 74/78 (94%)
 Frame = -2

Query: 235 DGVKDSQVVDARARNISHNVRCTECGSQSIEDSQADIAVLLRKLIRDEIKAGKSDKEIYK 56
           + VK  Q+++ RARNISHNVRCTECGSQSIEDSQAD+A+LLRKLIRDEIKAGKSDKEIYK
Sbjct: 5   EDVKQRQIIENRARNISHNVRCTECGSQSIEDSQADVAILLRKLIRDEIKAGKSDKEIYK 64

Query: 55  KLEDDYGETVLYAPKFDM 2
           KLEDDYGETVLYAPKFD+
Sbjct: 65  KLEDDYGETVLYAPKFDL 82


>ref|NP_001235607.1| uncharacterized protein LOC100306221 [Glycine max]
           gi|255627913|gb|ACU14301.1| unknown [Glycine max]
          Length = 159

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/83 (80%), Positives = 76/83 (91%)
 Frame = -2

Query: 250 MGSNGDGVKDSQVVDARARNISHNVRCTECGSQSIEDSQADIAVLLRKLIRDEIKAGKSD 71
           M S  D VK + +VDARARNISHNVRCTECGSQSIEDSQADIA+LLRKLIRDEI++GK+D
Sbjct: 1   MASEDDAVKKAMIVDARARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIQSGKTD 60

Query: 70  KEIYKKLEDDYGETVLYAPKFDM 2
           K+IYKKLED++GETVLY PKFDM
Sbjct: 61  KDIYKKLEDEFGETVLYTPKFDM 83


>ref|XP_002451946.1| hypothetical protein SORBIDRAFT_04g010410 [Sorghum bicolor]
           gi|241931777|gb|EES04922.1| hypothetical protein
           SORBIDRAFT_04g010410 [Sorghum bicolor]
          Length = 152

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/78 (85%), Positives = 74/78 (94%)
 Frame = -2

Query: 235 DGVKDSQVVDARARNISHNVRCTECGSQSIEDSQADIAVLLRKLIRDEIKAGKSDKEIYK 56
           + VK  Q+V+ RARNISHNVRCTECGSQSIEDSQAD+A+LLRKLIRDEIKAGKSDKEIYK
Sbjct: 5   EDVKQRQIVENRARNISHNVRCTECGSQSIEDSQADVAILLRKLIRDEIKAGKSDKEIYK 64

Query: 55  KLEDDYGETVLYAPKFDM 2
           KLED+YGETVLYAPKFD+
Sbjct: 65  KLEDEYGETVLYAPKFDL 82


>ref|XP_002303294.1| predicted protein [Populus trichocarpa] gi|222840726|gb|EEE78273.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/84 (83%), Positives = 79/84 (94%), Gaps = 1/84 (1%)
 Frame = -2

Query: 250 MGSNGDG-VKDSQVVDARARNISHNVRCTECGSQSIEDSQADIAVLLRKLIRDEIKAGKS 74
           MG+  D  +K +QVVDARARNISHNVRCTECGSQSIEDSQADIA+LLRKLIRDEI+AGK+
Sbjct: 1   MGNEQDEELKKAQVVDARARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIQAGKT 60

Query: 73  DKEIYKKLEDDYGETVLYAPKFDM 2
           DK+I+KKLEDD+GETVLYAPKFDM
Sbjct: 61  DKDIFKKLEDDFGETVLYAPKFDM 84


>ref|XP_002516012.1| Cytochrome c-type biogenesis protein cycL precursor, putative
           [Ricinus communis] gi|223544917|gb|EEF46432.1|
           Cytochrome c-type biogenesis protein cycL precursor,
           putative [Ricinus communis]
          Length = 159

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/80 (82%), Positives = 75/80 (93%)
 Frame = -2

Query: 241 NGDGVKDSQVVDARARNISHNVRCTECGSQSIEDSQADIAVLLRKLIRDEIKAGKSDKEI 62
           N D  K +Q+++ RARNISHNVRCTECGSQSIEDSQADIA+LLRKLIRDEI+AGKSDKEI
Sbjct: 5   NEDEAKKAQILETRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIQAGKSDKEI 64

Query: 61  YKKLEDDYGETVLYAPKFDM 2
           +KKLEDD+GETVLYAPKFD+
Sbjct: 65  FKKLEDDFGETVLYAPKFDL 84


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