BLASTX nr result

ID: Bupleurum21_contig00023072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023072
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319610.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002328525.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002512270.1| nucleotide binding protein, putative [Ricinu...   135   4e-30
ref|XP_003633666.1| PREDICTED: WD repeat-containing protein 48 h...   130   1e-28
emb|CBI34238.3| unnamed protein product [Vitis vinifera]              130   1e-28

>ref|XP_002319610.1| predicted protein [Populus trichocarpa] gi|222857986|gb|EEE95533.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/75 (90%), Positives = 69/75 (92%)
 Frame = +2

Query: 191 MHRVGSAGNTGNSVRPRKEKRLTYVLSDADDTKHCAGINCLAVLKSSVPDGHDCLFTGSR 370
           MHRVGSAGNT NSVRPRKEKRLTYVLSDADDTKHCAGINCL VLKS+V DG D LFTGSR
Sbjct: 1   MHRVGSAGNTNNSVRPRKEKRLTYVLSDADDTKHCAGINCLKVLKSTVSDGRDYLFTGSR 60

Query: 371 DGTLKRWMLSEDSAT 415
           DGTLKRW LSEDSAT
Sbjct: 61  DGTLKRWALSEDSAT 75


>ref|XP_002328525.1| predicted protein [Populus trichocarpa] gi|222838240|gb|EEE76605.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/75 (88%), Positives = 69/75 (92%)
 Frame = +2

Query: 191 MHRVGSAGNTGNSVRPRKEKRLTYVLSDADDTKHCAGINCLAVLKSSVPDGHDCLFTGSR 370
           MHRVGSAGNT NSVRPRKEKRLTYVLSDADDTKHCAGINCL VLKS+V +G D LFTGSR
Sbjct: 1   MHRVGSAGNTTNSVRPRKEKRLTYVLSDADDTKHCAGINCLKVLKSTVSNGCDYLFTGSR 60

Query: 371 DGTLKRWMLSEDSAT 415
           DGTLKRW +SEDSAT
Sbjct: 61  DGTLKRWAISEDSAT 75


>ref|XP_002512270.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223548231|gb|EEF49722.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 764

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/75 (85%), Positives = 69/75 (92%)
 Frame = +2

Query: 191 MHRVGSAGNTGNSVRPRKEKRLTYVLSDADDTKHCAGINCLAVLKSSVPDGHDCLFTGSR 370
           MHRVGSAGNT +SVRPRKEKRLTYVL+DADD KHC+G+NCLAVLKSSV DG D LFTGSR
Sbjct: 1   MHRVGSAGNTSSSVRPRKEKRLTYVLNDADDKKHCSGVNCLAVLKSSVSDGSDYLFTGSR 60

Query: 371 DGTLKRWMLSEDSAT 415
           DGTLKRW L+EDSAT
Sbjct: 61  DGTLKRWALAEDSAT 75


>ref|XP_003633666.1| PREDICTED: WD repeat-containing protein 48 homolog isoform 2 [Vitis
           vinifera]
          Length = 733

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/75 (82%), Positives = 65/75 (86%)
 Frame = +2

Query: 191 MHRVGSAGNTGNSVRPRKEKRLTYVLSDADDTKHCAGINCLAVLKSSVPDGHDCLFTGSR 370
           MHRVGSAGNT NS RPRKEKRLTYVL+DADDTKHCAGINCLAV K   PDG D LFTGSR
Sbjct: 1   MHRVGSAGNTSNSTRPRKEKRLTYVLNDADDTKHCAGINCLAVWKPLAPDGRDYLFTGSR 60

Query: 371 DGTLKRWMLSEDSAT 415
           DGTLKRW L+E+ AT
Sbjct: 61  DGTLKRWELTEEVAT 75


>emb|CBI34238.3| unnamed protein product [Vitis vinifera]
          Length = 781

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/75 (82%), Positives = 65/75 (86%)
 Frame = +2

Query: 191 MHRVGSAGNTGNSVRPRKEKRLTYVLSDADDTKHCAGINCLAVLKSSVPDGHDCLFTGSR 370
           MHRVGSAGNT NS RPRKEKRLTYVL+DADDTKHCAGINCLAV K   PDG D LFTGSR
Sbjct: 1   MHRVGSAGNTSNSTRPRKEKRLTYVLNDADDTKHCAGINCLAVWKPLAPDGRDYLFTGSR 60

Query: 371 DGTLKRWMLSEDSAT 415
           DGTLKRW L+E+ AT
Sbjct: 61  DGTLKRWELTEEVAT 75


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