BLASTX nr result

ID: Bupleurum21_contig00023058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023058
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512187.1| xpa-binding protein, putative [Ricinus commu...   266   5e-69
ref|XP_002279592.2| PREDICTED: GPN-loop GTPase 1 homolog [Vitis ...   263   4e-68
emb|CBI22859.3| unnamed protein product [Vitis vinifera]              263   4e-68
emb|CAN71805.1| hypothetical protein VITISV_029075 [Vitis vinifera]   263   4e-68
ref|XP_003592221.1| GPN-loop GTPase [Medicago truncatula] gi|355...   261   1e-67

>ref|XP_002512187.1| xpa-binding protein, putative [Ricinus communis]
           gi|223548731|gb|EEF50221.1| xpa-binding protein,
           putative [Ricinus communis]
          Length = 407

 Score =  266 bits (679), Expect = 5e-69
 Identities = 140/237 (59%), Positives = 176/237 (74%), Gaps = 1/237 (0%)
 Frame = +3

Query: 3   VISVIENRADQLDYILVDTPGQIDIFTLSASGVAITEAFALTFPTVITYVVDTPCSRSPT 182
           V+SVIE RA+QLDY+LVDTPGQI+IFT SASG  ITEAFA TFPTVI YVVDTP S SPT
Sbjct: 149 VVSVIEKRANQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVIAYVVDTPRSSSPT 208

Query: 183 TFMNNMLHACDILDKTRLPLVLAFNKTDVAEHHFALEWMKDFEVFGAALGSDNSCSLSLT 362
           TFM+NML+AC IL KTRLPLVLAFNKTDVA+H FALEWM+DFE F AA+ SD+S S +LT
Sbjct: 209 TFMSNMLYACSILYKTRLPLVLAFNKTDVAQHQFALEWMEDFEAFQAAVSSDHSYSSTLT 268

Query: 363 KCISSLLEAFYKNSRXXXXXXXXXXXMEAYFRAIDASANEYMETYRAYFDKRPVEQPLVE 542
           + +S +L+ FYKN +           MEA+F+A++ASA EYMETY+A  DKR  E+  +E
Sbjct: 269 QSLSLVLDEFYKNLKSVGVSAVSGAGMEAFFKAVEASAEEYMETYKAELDKRREEKQRLE 328

Query: 543 DELCKENMDKLSNE-TKSKGETVALNTGLTEGKENSMTMTGKECGGENEEFFGRFQE 710
           DE  +E+M++L  +  KSKGETV L+TGL + + +   M  +E   E ++   R+ E
Sbjct: 329 DERRRESMERLRKDMEKSKGETVVLSTGLKDKEASRDAMMDEEEEEEEDDDLERYTE 385


>ref|XP_002279592.2| PREDICTED: GPN-loop GTPase 1 homolog [Vitis vinifera]
          Length = 435

 Score =  263 bits (671), Expect = 4e-68
 Identities = 138/230 (60%), Positives = 169/230 (73%), Gaps = 1/230 (0%)
 Frame = +3

Query: 3   VISVIENRADQLDYILVDTPGQIDIFTLSASGVAITEAFALTFPTVITYVVDTPCSRSPT 182
           V+S+IE RADQLDY+LVDTPGQI+IFT SASG  ITEAFA TFPTVITYVVDTP S SP 
Sbjct: 153 VVSMIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVITYVVDTPRSASPV 212

Query: 183 TFMNNMLHACDILDKTRLPLVLAFNKTDVAEHHFALEWMKDFEVFGAALGSDNSCSLSLT 362
           TFM+NML+AC IL KTRLPLVLAFNK DVA+H FALEWM+DFEVF AAL SD+S + +LT
Sbjct: 213 TFMSNMLYACSILYKTRLPLVLAFNKVDVAQHQFALEWMEDFEVFHAALDSDHSYTSTLT 272

Query: 363 KCISSLLEAFYKNSRXXXXXXXXXXXMEAYFRAIDASANEYMETYRAYFDKRPVEQPLVE 542
           + +S +L+ FYKN +           ME +F+AI+ASA EYM +Y+A  DKR  E+  +E
Sbjct: 273 RSLSLVLDEFYKNLQSVGVSAVSGAGMEEFFKAIEASAEEYMTSYKADLDKRRAEKQRLE 332

Query: 543 DELCKENMDKLSNE-TKSKGETVALNTGLTEGKENSMTMTGKECGGENEE 689
           +E  +ENMD+L  +  KS GET+ L+TGL +      T   +E  GE EE
Sbjct: 333 EERMRENMDRLRKDMEKSGGETMVLSTGLKDKNAGGKTTMDEEDEGEEEE 382


>emb|CBI22859.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  263 bits (671), Expect = 4e-68
 Identities = 138/230 (60%), Positives = 169/230 (73%), Gaps = 1/230 (0%)
 Frame = +3

Query: 3   VISVIENRADQLDYILVDTPGQIDIFTLSASGVAITEAFALTFPTVITYVVDTPCSRSPT 182
           V+S+IE RADQLDY+LVDTPGQI+IFT SASG  ITEAFA TFPTVITYVVDTP S SP 
Sbjct: 153 VVSMIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVITYVVDTPRSASPV 212

Query: 183 TFMNNMLHACDILDKTRLPLVLAFNKTDVAEHHFALEWMKDFEVFGAALGSDNSCSLSLT 362
           TFM+NML+AC IL KTRLPLVLAFNK DVA+H FALEWM+DFEVF AAL SD+S + +LT
Sbjct: 213 TFMSNMLYACSILYKTRLPLVLAFNKVDVAQHQFALEWMEDFEVFHAALDSDHSYTSTLT 272

Query: 363 KCISSLLEAFYKNSRXXXXXXXXXXXMEAYFRAIDASANEYMETYRAYFDKRPVEQPLVE 542
           + +S +L+ FYKN +           ME +F+AI+ASA EYM +Y+A  DKR  E+  +E
Sbjct: 273 RSLSLVLDEFYKNLQSVGVSAVSGAGMEEFFKAIEASAEEYMTSYKADLDKRRAEKQRLE 332

Query: 543 DELCKENMDKLSNE-TKSKGETVALNTGLTEGKENSMTMTGKECGGENEE 689
           +E  +ENMD+L  +  KS GET+ L+TGL +      T   +E  GE EE
Sbjct: 333 EERMRENMDRLRKDMEKSGGETMVLSTGLKDKNAGGKTTMDEEDEGEEEE 382


>emb|CAN71805.1| hypothetical protein VITISV_029075 [Vitis vinifera]
          Length = 414

 Score =  263 bits (671), Expect = 4e-68
 Identities = 138/230 (60%), Positives = 169/230 (73%), Gaps = 1/230 (0%)
 Frame = +3

Query: 3   VISVIENRADQLDYILVDTPGQIDIFTLSASGVAITEAFALTFPTVITYVVDTPCSRSPT 182
           V+S+IE RADQLDY+LVDTPGQI+IFT SASG  ITEAFA TFPTVITYVVDTP S SP 
Sbjct: 153 VVSMIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVITYVVDTPRSASPV 212

Query: 183 TFMNNMLHACDILDKTRLPLVLAFNKTDVAEHHFALEWMKDFEVFGAALGSDNSCSLSLT 362
           TFM+NML+AC IL KTRLPLVLAFNK DVA+H FALEWM+DFEVF AAL SD+S + +LT
Sbjct: 213 TFMSNMLYACSILYKTRLPLVLAFNKVDVAQHQFALEWMEDFEVFHAALDSDHSYTSTLT 272

Query: 363 KCISSLLEAFYKNSRXXXXXXXXXXXMEAYFRAIDASANEYMETYRAYFDKRPVEQPLVE 542
           + +S +L+ FYKN +           ME +F+AI+ASA EYM +Y+A  DKR  E+  +E
Sbjct: 273 RSLSLVLDEFYKNLQSVGVSAVSGAGMEEFFKAIEASAEEYMTSYKADLDKRRAEKQRLE 332

Query: 543 DELCKENMDKLSNE-TKSKGETVALNTGLTEGKENSMTMTGKECGGENEE 689
           +E  +ENMD+L  +  KS GET+ L+TGL +      T   +E  GE EE
Sbjct: 333 EERMRENMDRLRKDMEKSGGETMVLSTGLKDKNAGGKTTMDEEDEGEEEE 382


>ref|XP_003592221.1| GPN-loop GTPase [Medicago truncatula] gi|355481269|gb|AES62472.1|
           GPN-loop GTPase [Medicago truncatula]
          Length = 396

 Score =  261 bits (668), Expect = 1e-67
 Identities = 140/237 (59%), Positives = 169/237 (71%), Gaps = 1/237 (0%)
 Frame = +3

Query: 3   VISVIENRADQLDYILVDTPGQIDIFTLSASGVAITEAFALTFPTVITYVVDTPCSRSPT 182
           VISVIE RADQLDY+LVDTPGQI+IFT SASG  ITEAFA TFPTV+ YVVDTP + +PT
Sbjct: 143 VISVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVAYVVDTPRAENPT 202

Query: 183 TFMNNMLHACDILDKTRLPLVLAFNKTDVAEHHFALEWMKDFEVFGAALGSDNSCSLSLT 362
           TFM+NML+AC IL KTRLPL+LAFNK DVA+H FALEWMKDFEVF AA  SD S + +LT
Sbjct: 203 TFMSNMLYACSILYKTRLPLILAFNKVDVAQHEFALEWMKDFEVFQAAASSDQSYTSNLT 262

Query: 363 KCISSLLEAFYKNSRXXXXXXXXXXXMEAYFRAIDASANEYMETYRAYFDKRPVEQPLVE 542
           + +S  L+ FY N R           +E +F+A++ASA EYMETY+A  DKR  E+ L+E
Sbjct: 263 QSLSLALDEFYSNLRSAGVSAVTGAGIEGFFKAVEASAEEYMETYKADLDKRREEKQLLE 322

Query: 543 DELCKENMDKLSNE-TKSKGETVALNTGLTEGKENSMTMTGKECGGENEEFFGRFQE 710
           +   KENMDKL  E  KS GETV L+TGL + KE       +E   ++   FG + E
Sbjct: 323 ENRRKENMDKLRREMEKSGGETVVLSTGL-KNKEEDEDEEDEEMDDDDNVDFGTYTE 378


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