BLASTX nr result

ID: Bupleurum21_contig00023040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023040
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311742.1| predicted protein [Populus trichocarpa] gi|2...   179   4e-43
ref|XP_002267857.1| PREDICTED: uncharacterized protein LOC100247...   174   2e-41
gb|AFK33753.1| unknown [Medicago truncatula]                          166   4e-39
ref|XP_003601857.1| hypothetical protein MTR_3g086170 [Medicago ...   166   4e-39
ref|XP_004135506.1| PREDICTED: uncharacterized protein LOC101218...   164   1e-38

>ref|XP_002311742.1| predicted protein [Populus trichocarpa] gi|222851562|gb|EEE89109.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score =  179 bits (454), Expect = 4e-43
 Identities = 81/151 (53%), Positives = 98/151 (64%)
 Frame = -2

Query: 459 PTDYXXXXXXXXXXXXXXXXXXSPFLIHKVPRPKGSRFWLPAIQXXXXXXXXXXXXXXXX 280
           P+DY                   PFLIHK+PR  GS FW+P IQ                
Sbjct: 19  PSDYIAISIAILAFFLLLSRLLFPFLIHKIPRTNGSGFWIPVIQVFGSFNLLLSIVMSIN 78

Query: 279 XXXLTTTQWWRSCYIWAVWFEGPLGFGLLVSSRITQAFQLYHIFLKRRLPPIRSYIFLPL 100
                 + WW+SCY+WAVW EGPLGFGLL+S RI QAFQL+HIF+KR+LPPIRSY FLPL
Sbjct: 79  FLKFEKSHWWQSCYVWAVWIEGPLGFGLLLSCRIAQAFQLHHIFVKRQLPPIRSYFFLPL 138

Query: 99  ILLPWVALSAFIHLRRPLNGRCHMGIYYIIP 7
           ILLPWVA +AF+H++RPLN RCHMG ++I+P
Sbjct: 139 ILLPWVAGAAFVHVKRPLNDRCHMGTHWIVP 169


>ref|XP_002267857.1| PREDICTED: uncharacterized protein LOC100247607 [Vitis vinifera]
           gi|297738317|emb|CBI27518.3| unnamed protein product
           [Vitis vinifera]
          Length = 466

 Score =  174 bits (440), Expect = 2e-41
 Identities = 79/151 (52%), Positives = 96/151 (63%)
 Frame = -2

Query: 459 PTDYXXXXXXXXXXXXXXXXXXSPFLIHKVPRPKGSRFWLPAIQXXXXXXXXXXXXXXXX 280
           P+DY                   PFL+HKVPRPKGS FW+P IQ                
Sbjct: 11  PSDYIAVAISLLCFILLLIKATLPFLVHKVPRPKGSGFWIPVIQVFASLNLLLSIVMSIN 70

Query: 279 XXXLTTTQWWRSCYIWAVWFEGPLGFGLLVSSRITQAFQLYHIFLKRRLPPIRSYIFLPL 100
                   WW+SCY+WAVW EGPLGFGLL+S RI QAFQLY+IF+KRRLPPIRSY+FLP 
Sbjct: 71  FLKFKKKHWWQSCYLWAVWVEGPLGFGLLLSCRIVQAFQLYYIFVKRRLPPIRSYVFLPT 130

Query: 99  ILLPWVALSAFIHLRRPLNGRCHMGIYYIIP 7
           I+LPW+A +A +H ++PLN RCH+G  +IIP
Sbjct: 131 IVLPWIAGAALLHKKKPLNERCHLGTRWIIP 161


>gb|AFK33753.1| unknown [Medicago truncatula]
          Length = 465

 Score =  166 bits (420), Expect = 4e-39
 Identities = 76/151 (50%), Positives = 95/151 (62%)
 Frame = -2

Query: 459 PTDYXXXXXXXXXXXXXXXXXXSPFLIHKVPRPKGSRFWLPAIQXXXXXXXXXXXXXXXX 280
           PTDY                   PF++HKVPR KGS FW+P IQ                
Sbjct: 13  PTDYVAVTVSILSFILLLIWSIFPFIVHKVPRTKGSGFWIPVIQVVASFNLLLSIMMSHN 72

Query: 279 XXXLTTTQWWRSCYIWAVWFEGPLGFGLLVSSRITQAFQLYHIFLKRRLPPIRSYIFLPL 100
                 + WW+SCY+WAVW EGPLGFGLL+SSRITQAFQLY IF+KRRLP IRS++ +PL
Sbjct: 73  FFKFEKSHWWQSCYLWAVWGEGPLGFGLLLSSRITQAFQLYFIFVKRRLPLIRSFLLIPL 132

Query: 99  ILLPWVALSAFIHLRRPLNGRCHMGIYYIIP 7
           ILLPW+  +A IH+++PL+ RCHM + + IP
Sbjct: 133 ILLPWIIGAAVIHIKKPLSNRCHMSVQWTIP 163


>ref|XP_003601857.1| hypothetical protein MTR_3g086170 [Medicago truncatula]
           gi|355490905|gb|AES72108.1| hypothetical protein
           MTR_3g086170 [Medicago truncatula]
          Length = 475

 Score =  166 bits (420), Expect = 4e-39
 Identities = 76/151 (50%), Positives = 95/151 (62%)
 Frame = -2

Query: 459 PTDYXXXXXXXXXXXXXXXXXXSPFLIHKVPRPKGSRFWLPAIQXXXXXXXXXXXXXXXX 280
           PTDY                   PF++HKVPR KGS FW+P IQ                
Sbjct: 13  PTDYVAVTVSILSFILLLIWSIFPFIVHKVPRTKGSGFWIPVIQVVASFNLLLSIMMSHN 72

Query: 279 XXXLTTTQWWRSCYIWAVWFEGPLGFGLLVSSRITQAFQLYHIFLKRRLPPIRSYIFLPL 100
                 + WW+SCY+WAVW EGPLGFGLL+SSRITQAFQLY IF+KRRLP IRS++ +PL
Sbjct: 73  FFKFEKSHWWQSCYLWAVWGEGPLGFGLLLSSRITQAFQLYFIFVKRRLPLIRSFLLIPL 132

Query: 99  ILLPWVALSAFIHLRRPLNGRCHMGIYYIIP 7
           ILLPW+  +A IH+++PL+ RCHM + + IP
Sbjct: 133 ILLPWIIGAAVIHIKKPLSNRCHMSVQWTIP 163


>ref|XP_004135506.1| PREDICTED: uncharacterized protein LOC101218119 [Cucumis sativus]
           gi|449512982|ref|XP_004164196.1| PREDICTED:
           uncharacterized protein LOC101224641 [Cucumis sativus]
          Length = 464

 Score =  164 bits (416), Expect = 1e-38
 Identities = 79/151 (52%), Positives = 100/151 (66%)
 Frame = -2

Query: 459 PTDYXXXXXXXXXXXXXXXXXXSPFLIHKVPRPKGSRFWLPAIQXXXXXXXXXXXXXXXX 280
           P+DY                   P++++K+P PKGSRFW+P IQ                
Sbjct: 11  PSDYIAIVFAAVCLALLIFRWILPYVMYKIPLPKGSRFWIPVIQVFASLNLLLSIVISVS 70

Query: 279 XXXLTTTQWWRSCYIWAVWFEGPLGFGLLVSSRITQAFQLYHIFLKRRLPPIRSYIFLPL 100
                  Q WRSCYIWAVW EGPLGFGLL+SSRITQ FQLY+IF+KRRLPPI+++IFLPL
Sbjct: 71  FFKFKR-QKWRSCYIWAVWVEGPLGFGLLLSSRITQTFQLYYIFVKRRLPPIKTHIFLPL 129

Query: 99  ILLPWVALSAFIHLRRPLNGRCHMGIYYIIP 7
           ILLPW++ +AFI++++PLN RCHMG  +IIP
Sbjct: 130 ILLPWISGAAFINVKKPLNYRCHMGPRWIIP 160


Top