BLASTX nr result

ID: Bupleurum21_contig00023033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023033
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263195.2| PREDICTED: protein misato homolog 1-like [Vi...   139   3e-31
ref|XP_002300359.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_003517285.1| PREDICTED: protein misato homolog 1-like [Gl...   126   2e-27
ref|XP_002866980.1| hypothetical protein ARALYDRAFT_912663 [Arab...   125   3e-27
ref|XP_003537356.1| PREDICTED: protein misato homolog 1-like [Gl...   125   4e-27

>ref|XP_002263195.2| PREDICTED: protein misato homolog 1-like [Vitis vinifera]
           gi|302144155|emb|CBI23282.3| unnamed protein product
           [Vitis vinifera]
          Length = 575

 Score =  139 bits (349), Expect = 3e-31
 Identities = 66/83 (79%), Positives = 72/83 (86%)
 Frame = -3

Query: 250 MREIVTIQTGGFANFIGSHFWNFQDELLGLAETAEAGSVFKDQCIDMDVLYRTGETLQGT 71
           MREIVTIQ GGFANFIGSHFWNFQDELLGLA       +FK+Q +DMDVLYRTGETLQG 
Sbjct: 1   MREIVTIQVGGFANFIGSHFWNFQDELLGLAGDPNGDPIFKNQHLDMDVLYRTGETLQGI 60

Query: 70  CTYTPRLLSIDFQGSLGSMSSHG 2
            TYTPRL+S++FQGSLGSMSSHG
Sbjct: 61  ATYTPRLVSVNFQGSLGSMSSHG 83


>ref|XP_002300359.1| predicted protein [Populus trichocarpa] gi|222847617|gb|EEE85164.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/85 (72%), Positives = 71/85 (83%), Gaps = 2/85 (2%)
 Frame = -3

Query: 250 MREIVTIQTGGFANFIGSHFWNFQDELLGLAETAEAGSVFKDQC--IDMDVLYRTGETLQ 77
           MRE+VT+Q GGFANF+GSHFWNFQDELLGLA   ++  VFK+Q   ++MD LYRTGET Q
Sbjct: 1   MRELVTVQVGGFANFVGSHFWNFQDELLGLAGDPDSDPVFKNQSQYLNMDTLYRTGETNQ 60

Query: 76  GTCTYTPRLLSIDFQGSLGSMSSHG 2
           G  TYTPRLLSID+QGSLGSMSS G
Sbjct: 61  GVQTYTPRLLSIDYQGSLGSMSSRG 85


>ref|XP_003517285.1| PREDICTED: protein misato homolog 1-like [Glycine max]
          Length = 572

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/83 (73%), Positives = 70/83 (84%)
 Frame = -3

Query: 250 MREIVTIQTGGFANFIGSHFWNFQDELLGLAETAEAGSVFKDQCIDMDVLYRTGETLQGT 71
           M+EIVT+Q G FANF+GSHFWNFQDELLGLA    A SVFK+Q ++MDVLYRTGET QG 
Sbjct: 1   MKEIVTVQVGDFANFVGSHFWNFQDELLGLAGNPSADSVFKNQDLNMDVLYRTGETQQGI 60

Query: 70  CTYTPRLLSIDFQGSLGSMSSHG 2
            +YTPRLLSI+ +GSLGSMSS G
Sbjct: 61  PSYTPRLLSINLRGSLGSMSSRG 83


>ref|XP_002866980.1| hypothetical protein ARALYDRAFT_912663 [Arabidopsis lyrata subsp.
           lyrata] gi|297312816|gb|EFH43239.1| hypothetical protein
           ARALYDRAFT_912663 [Arabidopsis lyrata subsp. lyrata]
          Length = 562

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/83 (69%), Positives = 69/83 (83%)
 Frame = -3

Query: 250 MREIVTIQTGGFANFIGSHFWNFQDELLGLAETAEAGSVFKDQCIDMDVLYRTGETLQGT 71
           MREIVTIQ G FANF+GSHFWNFQDELLGLA   E+  +F+   +DMDVLYR+GETLQG 
Sbjct: 1   MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRSHNLDMDVLYRSGETLQGV 60

Query: 70  CTYTPRLLSIDFQGSLGSMSSHG 2
            TYTPRL+S++ +GSLG+MSS G
Sbjct: 61  ATYTPRLVSVNLKGSLGTMSSRG 83


>ref|XP_003537356.1| PREDICTED: protein misato homolog 1-like [Glycine max]
          Length = 572

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/83 (73%), Positives = 70/83 (84%)
 Frame = -3

Query: 250 MREIVTIQTGGFANFIGSHFWNFQDELLGLAETAEAGSVFKDQCIDMDVLYRTGETLQGT 71
           M+EIVT+Q G FANF+GSHFWNFQDELLGLAE   A S FK+Q ++MDVLYRTGET QG 
Sbjct: 1   MKEIVTVQVGDFANFVGSHFWNFQDELLGLAEDPFADSFFKNQDLNMDVLYRTGETQQGI 60

Query: 70  CTYTPRLLSIDFQGSLGSMSSHG 2
            +YTPRLLSI+ +GSLGSMSS G
Sbjct: 61  PSYTPRLLSINLRGSLGSMSSRG 83


Top