BLASTX nr result

ID: Bupleurum21_contig00023026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023026
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15085.3| unnamed protein product [Vitis vinifera]              207   7e-52
ref|XP_002283633.1| PREDICTED: endonuclease III-like [Vitis vini...   207   7e-52
ref|XP_002511456.1| Endonuclease III, putative [Ricinus communis...   200   1e-49
ref|XP_003525486.1| PREDICTED: endonuclease III-like [Glycine max]    197   1e-48
ref|XP_002321564.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48

>emb|CBI15085.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  207 bits (527), Expect = 7e-52
 Identities = 98/121 (80%), Positives = 106/121 (87%)
 Frame = +2

Query: 23  GKLCLEYLRDLSIDEIKEELSQFKGIGPKTVACVLMFNLQRDDFPVDTHVLQIAKAIGWV 202
           GKLCLEYLRDL++DEIK ELS FKGIGPKTVACVLMF+LQRDDFPVDTHV+QI KAIGWV
Sbjct: 179 GKLCLEYLRDLTVDEIKTELSHFKGIGPKTVACVLMFHLQRDDFPVDTHVIQIGKAIGWV 238

Query: 203 PAVADMKKTYLHLNQRIPDELKFDLNCLLFTHGKICKRCTGKWSNQ*KIESDGVSCPLLN 382
           PAVAD KK YLHLN+RIPDELKFDLNCLLFTHGK+C  CT K +NQ + ES   SCPLL 
Sbjct: 239 PAVADRKKAYLHLNRRIPDELKFDLNCLLFTHGKLCHECTQKGANQKRKESHESSCPLLT 298

Query: 383 Y 385
           Y
Sbjct: 299 Y 299


>ref|XP_002283633.1| PREDICTED: endonuclease III-like [Vitis vinifera]
          Length = 310

 Score =  207 bits (527), Expect = 7e-52
 Identities = 98/121 (80%), Positives = 106/121 (87%)
 Frame = +2

Query: 23  GKLCLEYLRDLSIDEIKEELSQFKGIGPKTVACVLMFNLQRDDFPVDTHVLQIAKAIGWV 202
           GKLCLEYLRDL++DEIK ELS FKGIGPKTVACVLMF+LQRDDFPVDTHV+QI KAIGWV
Sbjct: 179 GKLCLEYLRDLTVDEIKTELSHFKGIGPKTVACVLMFHLQRDDFPVDTHVIQIGKAIGWV 238

Query: 203 PAVADMKKTYLHLNQRIPDELKFDLNCLLFTHGKICKRCTGKWSNQ*KIESDGVSCPLLN 382
           PAVAD KK YLHLN+RIPDELKFDLNCLLFTHGK+C  CT K +NQ + ES   SCPLL 
Sbjct: 239 PAVADRKKAYLHLNRRIPDELKFDLNCLLFTHGKLCHECTQKGANQKRKESHESSCPLLT 298

Query: 383 Y 385
           Y
Sbjct: 299 Y 299


>ref|XP_002511456.1| Endonuclease III, putative [Ricinus communis]
           gi|223550571|gb|EEF52058.1| Endonuclease III, putative
           [Ricinus communis]
          Length = 291

 Score =  200 bits (508), Expect = 1e-49
 Identities = 91/121 (75%), Positives = 107/121 (88%)
 Frame = +2

Query: 23  GKLCLEYLRDLSIDEIKEELSQFKGIGPKTVACVLMFNLQRDDFPVDTHVLQIAKAIGWV 202
           GK+CLEYLRD+S+DEIK ELSQFKG+GPKTVACVLMF+LQ++DFPVDTHV +IAKA+GWV
Sbjct: 158 GKICLEYLRDMSVDEIKAELSQFKGVGPKTVACVLMFHLQQEDFPVDTHVFEIAKALGWV 217

Query: 203 PAVADMKKTYLHLNQRIPDELKFDLNCLLFTHGKICKRCTGKWSNQ*KIESDGVSCPLLN 382
           P VAD  KTYLHLNQRIP+ELKFDLNCLL+THGK+C++C  K  NQ + ES   SCPLL+
Sbjct: 218 PEVADRNKTYLHLNQRIPNELKFDLNCLLYTHGKLCRKCIKKRGNQSRKESHDDSCPLLS 277

Query: 383 Y 385
           Y
Sbjct: 278 Y 278


>ref|XP_003525486.1| PREDICTED: endonuclease III-like [Glycine max]
          Length = 284

 Score =  197 bits (500), Expect = 1e-48
 Identities = 89/121 (73%), Positives = 106/121 (87%)
 Frame = +2

Query: 23  GKLCLEYLRDLSIDEIKEELSQFKGIGPKTVACVLMFNLQRDDFPVDTHVLQIAKAIGWV 202
           G+LCLEYLRDLS+DE+K ELS FKGIGPKTVACVLMFNLQ+DDFPVDTH+ +IAK +GWV
Sbjct: 157 GELCLEYLRDLSVDEVKAELSLFKGIGPKTVACVLMFNLQQDDFPVDTHIFEIAKTMGWV 216

Query: 203 PAVADMKKTYLHLNQRIPDELKFDLNCLLFTHGKICKRCTGKWSNQ*KIESDGVSCPLLN 382
           PAVA+  K+YLHLNQR+P+ELKFDLNCLL+THGK+C +C+GK  N+   + D  SCPLLN
Sbjct: 217 PAVANRNKSYLHLNQRVPNELKFDLNCLLYTHGKLCHQCSGKKGNKQGKKCDDNSCPLLN 276

Query: 383 Y 385
           Y
Sbjct: 277 Y 277


>ref|XP_002321564.1| predicted protein [Populus trichocarpa] gi|222868560|gb|EEF05691.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  197 bits (500), Expect = 1e-48
 Identities = 92/121 (76%), Positives = 103/121 (85%)
 Frame = +2

Query: 23  GKLCLEYLRDLSIDEIKEELSQFKGIGPKTVACVLMFNLQRDDFPVDTHVLQIAKAIGWV 202
           G+LCLEYLRDL + EIK ELS FKGIGPKTVACVLMFNLQ+DDFPVDTHV +IAKAIGWV
Sbjct: 184 GRLCLEYLRDLPVAEIKAELSHFKGIGPKTVACVLMFNLQKDDFPVDTHVFEIAKAIGWV 243

Query: 203 PAVADMKKTYLHLNQRIPDELKFDLNCLLFTHGKICKRCTGKWSNQ*KIESDGVSCPLLN 382
           P VAD  KTYLHLN RIP ELKFDLNCLL+THGK+C++CT K  +Q + E+   SCPLLN
Sbjct: 244 PPVADRNKTYLHLNHRIPKELKFDLNCLLYTHGKLCRKCTKKSGSQQRKETHDDSCPLLN 303

Query: 383 Y 385
           Y
Sbjct: 304 Y 304


Top