BLASTX nr result

ID: Bupleurum21_contig00023002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023002
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283101.1| PREDICTED: origin recognition complex subuni...   207   9e-52
emb|CBI15609.3| unnamed protein product [Vitis vinifera]              207   9e-52
ref|XP_002320803.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-47
ref|XP_002511876.1| conserved hypothetical protein [Ricinus comm...   187   6e-46
ref|XP_003533607.1| PREDICTED: origin recognition complex subuni...   186   2e-45

>ref|XP_002283101.1| PREDICTED: origin recognition complex subunit 5-like [Vitis
           vinifera]
          Length = 541

 Score =  207 bits (526), Expect = 9e-52
 Identities = 103/149 (69%), Positives = 118/149 (79%), Gaps = 6/149 (4%)
 Frame = -1

Query: 429 DKSPQITRRTTRLSASSPSVSNDVKLPKC------TIRDLVYGGEALNADDLFSSLPGRR 268
           D+SPQITRRTTR S+S+P + N  +  K       TI DLV+GGE +  D+L SS PGRR
Sbjct: 5   DESPQITRRTTRSSSSTPILKNGEETTKTSEPHPLTINDLVFGGEPIKLDELLSSFPGRR 64

Query: 267 SVILELIRFLGPVNSQMIPLFLYGGASTGKTATVLQIFRHLKRPFVYVSCRTCYSPRILF 88
             ILEL+R LGP+NS M+PLFLYGG STGKT+ +LQIFRHL RPFVY SC TCYSPRILF
Sbjct: 65  IQILELMRLLGPLNSPMLPLFLYGGTSTGKTSIILQIFRHLNRPFVYSSCLTCYSPRILF 124

Query: 87  ESIMNQLLLHRKNEGNGYSSAKRCEKPSD 1
           ESIMNQLLLHRKN  NGY+SAKRCE+PSD
Sbjct: 125 ESIMNQLLLHRKNADNGYASAKRCERPSD 153


>emb|CBI15609.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  207 bits (526), Expect = 9e-52
 Identities = 103/152 (67%), Positives = 119/152 (78%), Gaps = 6/152 (3%)
 Frame = -1

Query: 438 MSTDKSPQITRRTTRLSASSPSVSNDVKLPKC------TIRDLVYGGEALNADDLFSSLP 277
           M  ++SPQITRRTTR S+S+P + N  +  K       TI DLV+GGE +  D+L SS P
Sbjct: 1   MGKEESPQITRRTTRSSSSTPILKNGEETTKTSEPHPLTINDLVFGGEPIKLDELLSSFP 60

Query: 276 GRRSVILELIRFLGPVNSQMIPLFLYGGASTGKTATVLQIFRHLKRPFVYVSCRTCYSPR 97
           GRR  ILEL+R LGP+NS M+PLFLYGG STGKT+ +LQIFRHL RPFVY SC TCYSPR
Sbjct: 61  GRRIQILELMRLLGPLNSPMLPLFLYGGTSTGKTSIILQIFRHLNRPFVYSSCLTCYSPR 120

Query: 96  ILFESIMNQLLLHRKNEGNGYSSAKRCEKPSD 1
           ILFESIMNQLLLHRKN  NGY+SAKRCE+PSD
Sbjct: 121 ILFESIMNQLLLHRKNADNGYASAKRCERPSD 152


>ref|XP_002320803.1| predicted protein [Populus trichocarpa] gi|222861576|gb|EEE99118.1|
           predicted protein [Populus trichocarpa]
          Length = 536

 Score =  192 bits (487), Expect = 3e-47
 Identities = 95/152 (62%), Positives = 116/152 (76%), Gaps = 6/152 (3%)
 Frame = -1

Query: 438 MSTDKSPQITRRTTRLSASSPSVSNDVKLPKCT------IRDLVYGGEALNADDLFSSLP 277
           M  ++SPQITRR TRLS+S+   SN+V+  K T      + D V+GGE L+ +DL SS P
Sbjct: 1   MGKEESPQITRRVTRLSSSTAVTSNEVETEKITKPYKPTLNDFVFGGEQLSFNDLLSSFP 60

Query: 276 GRRSVILELIRFLGPVNSQMIPLFLYGGASTGKTATVLQIFRHLKRPFVYVSCRTCYSPR 97
            R + I EL+R LGPVNS M+PLF+YG  STGKT+T+LQIFR+L RPFVY SCRTCYS +
Sbjct: 61  ARGNQIRELLRLLGPVNSPMLPLFVYGDPSTGKTSTILQIFRYLNRPFVYASCRTCYSLQ 120

Query: 96  ILFESIMNQLLLHRKNEGNGYSSAKRCEKPSD 1
           ILFES++NQLLLH+KN  NGYSS KRC KPSD
Sbjct: 121 ILFESVLNQLLLHKKNSANGYSSTKRCIKPSD 152


>ref|XP_002511876.1| conserved hypothetical protein [Ricinus communis]
           gi|223549056|gb|EEF50545.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 547

 Score =  187 bits (476), Expect = 6e-46
 Identities = 96/152 (63%), Positives = 111/152 (73%), Gaps = 9/152 (5%)
 Frame = -1

Query: 429 DKSPQITRRTTRLSASSPS---VSNDVKLPKC------TIRDLVYGGEALNADDLFSSLP 277
           + SPQ TR TTR  +SS +     ND+   K       T+ DLV+ GE +N  DL SS P
Sbjct: 6   NNSPQFTRMTTRTRSSSSAPATTGNDIGRTKISESYTPTLNDLVFRGERINFGDLLSSFP 65

Query: 276 GRRSVILELIRFLGPVNSQMIPLFLYGGASTGKTATVLQIFRHLKRPFVYVSCRTCYSPR 97
            R+  I EL+R LGP+NS M+PLFLYG +STGKT+ VLQIFRHL RPFVYVSCRTCYSPR
Sbjct: 66  ARKVQISELLRLLGPLNSPMLPLFLYGASSTGKTSIVLQIFRHLNRPFVYVSCRTCYSPR 125

Query: 96  ILFESIMNQLLLHRKNEGNGYSSAKRCEKPSD 1
           ILFESI+NQLL H KN  NGYSS+KRCEKPSD
Sbjct: 126 ILFESILNQLLFHSKNSANGYSSSKRCEKPSD 157


>ref|XP_003533607.1| PREDICTED: origin recognition complex subunit 5-like [Glycine max]
          Length = 542

 Score =  186 bits (471), Expect = 2e-45
 Identities = 92/153 (60%), Positives = 115/153 (75%), Gaps = 7/153 (4%)
 Frame = -1

Query: 438 MSTDKSPQITRRTTRLSASS-PSVSNDV------KLPKCTIRDLVYGGEALNADDLFSSL 280
           M  DK+ Q+ RR TR SASS PS SN++       L   TI DL+ GG+ ++ DD+ SS 
Sbjct: 1   MDEDKTQQLPRRMTRSSASSSPSTSNNIVAAKVTSLEPLTINDLLVGGDPISLDDIISSF 60

Query: 279 PGRRSVILELIRFLGPVNSQMIPLFLYGGASTGKTATVLQIFRHLKRPFVYVSCRTCYSP 100
           PGR S ILE++R LGP+NS M+PLF+YG +STGKT+ +LQ+FRHL RP V+ SCRTCY+ 
Sbjct: 61  PGRSSQILEVVRHLGPLNSPMLPLFVYGSSSTGKTSIILQLFRHLNRPIVFSSCRTCYNQ 120

Query: 99  RILFESIMNQLLLHRKNEGNGYSSAKRCEKPSD 1
            ILFESI+NQLLLHRKN  NGY +AKRCE+PSD
Sbjct: 121 NILFESILNQLLLHRKNAANGYLNAKRCERPSD 153


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