BLASTX nr result

ID: Bupleurum21_contig00022532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022532
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279706.1| PREDICTED: uncharacterized protein LOC100258...    72   4e-11
emb|CAN72107.1| hypothetical protein VITISV_044045 [Vitis vinifera]    72   5e-11
ref|XP_003542102.1| PREDICTED: uncharacterized protein LOC100792...    58   7e-07
ref|XP_002516077.1| conserved hypothetical protein [Ricinus comm...    58   9e-07
ref|XP_003560997.1| PREDICTED: uncharacterized protein LOC100825...    57   1e-06

>ref|XP_002279706.1| PREDICTED: uncharacterized protein LOC100258307 [Vitis vinifera]
          Length = 237

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = -3

Query: 269 PNHHTYQ-NYVVLPVYIPVSGRSKYRRXXXXXXXXXXXXXXXXXLWPSDPDLSVVRLRFS 93
           P+H   + NYVVLP+YIP+  R   R                  LWPSDPD+S+VRLR  
Sbjct: 41  PSHPASERNYVVLPLYIPLLHRRCNRFRLLTAASVLLLVASTFVLWPSDPDVSIVRLRLR 100

Query: 92  RINVRAVPHVTLDITAELTVKVRNPDVYSL 3
           RI V   P ++LD++  L VKVRN D+YS+
Sbjct: 101 RIAVHTFPRLSLDVSMSLMVKVRNVDLYSM 130


>emb|CAN72107.1| hypothetical protein VITISV_044045 [Vitis vinifera]
          Length = 224

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/83 (45%), Positives = 49/83 (59%)
 Frame = -3

Query: 251 QNYVVLPVYIPVSGRSKYRRXXXXXXXXXXXXXXXXXLWPSDPDLSVVRLRFSRINVRAV 72
           +NYVVLP+YIP+  R   R                  LWPSDPD+S+VRLR  RI V   
Sbjct: 42  RNYVVLPLYIPLLHRRCNRFRLLTAAAVLLLVASTFVLWPSDPDVSIVRLRLRRIAVHTF 101

Query: 71  PHVTLDITAELTVKVRNPDVYSL 3
           P ++LD++  L VKVRN D+YS+
Sbjct: 102 PRLSLDVSMSLMVKVRNVDLYSM 124


>ref|XP_003542102.1| PREDICTED: uncharacterized protein LOC100792375 [Glycine max]
          Length = 277

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/87 (37%), Positives = 43/87 (49%)
 Frame = -3

Query: 269 PNHHTYQNYVVLPVYIPVSGRSKYRRXXXXXXXXXXXXXXXXXLWPSDPDLSVVRLRFSR 90
           P++H +QNYVVL            RR                  WPS PDL +V L+  R
Sbjct: 16  PHNHHHQNYVVL----------SRRRVVTLAVGVLILLSALYIFWPSGPDLKIVGLKLRR 65

Query: 89  INVRAVPHVTLDITAELTVKVRNPDVY 9
           I V  VP +T+DI+  LT++V N DVY
Sbjct: 66  IKVHPVPPITIDISMLLTLRVHNVDVY 92


>ref|XP_002516077.1| conserved hypothetical protein [Ricinus communis]
           gi|223544982|gb|EEF46497.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 215

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 22/45 (48%), Positives = 35/45 (77%)
 Frame = -3

Query: 137 WPSDPDLSVVRLRFSRINVRAVPHVTLDITAELTVKVRNPDVYSL 3
           WPSDP L +VRLR +++++  +P + +D++  +TVKVRN DVYS+
Sbjct: 68  WPSDPTLKIVRLRLNKLHIHTLPIINIDVSLHVTVKVRNVDVYSM 112


>ref|XP_003560997.1| PREDICTED: uncharacterized protein LOC100825061 [Brachypodium
           distachyon]
          Length = 225

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/45 (57%), Positives = 36/45 (80%)
 Frame = -3

Query: 137 WPSDPDLSVVRLRFSRINVRAVPHVTLDITAELTVKVRNPDVYSL 3
           WP+DPD+SV RLR + I+V A P V L+I+A L V+VRNPD+++L
Sbjct: 74  WPADPDVSVARLRLAHISVVARPAVALNISAALKVRVRNPDLFAL 118


Top