BLASTX nr result

ID: Bupleurum21_contig00022498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022498
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273792.1| PREDICTED: ABC transporter G family member 3...   309   4e-82
ref|XP_002523691.1| ATP-binding cassette transporter, putative [...   293   3e-77
ref|XP_002313530.1| white-brown-complex ABC transporter family [...   290   2e-76
ref|XP_003540196.1| PREDICTED: ABC transporter G family member 3...   287   2e-75
ref|XP_003638054.1| White-brown-complex ABC transporter family [...   286   4e-75

>ref|XP_002273792.1| PREDICTED: ABC transporter G family member 3 [Vitis vinifera]
            gi|297734935|emb|CBI17169.3| unnamed protein product
            [Vitis vinifera]
          Length = 722

 Score =  309 bits (791), Expect = 4e-82
 Identities = 154/216 (71%), Positives = 170/216 (78%), Gaps = 1/216 (0%)
 Frame = +2

Query: 2    AQMNEVKIYVCEESNHHSGALVFLLGQVXXXXXXXXXXXXXXXXXXYFMIGLQHEFSLLM 181
            A + E+KIY CEESN HSGALVFLLGQ+                  YF+IGL+ EFSLLM
Sbjct: 504  AHLKEIKIYACEESNQHSGALVFLLGQLLASIPFLFLISVSSSLIFYFLIGLRDEFSLLM 563

Query: 182  YFVLNFFMCLLVNEGLVLFITSIWQDIFWSILTLVSLHALMMLSAGYFRIRSALPGPVWM 361
            YFVLNFF CLLVNEGL L + SIWQD FWSILTLV +H LMMLSAGYFR+RSALPGPVW 
Sbjct: 564  YFVLNFFTCLLVNEGLTLVVASIWQDAFWSILTLVCIHVLMMLSAGYFRLRSALPGPVWT 623

Query: 362  YPVSYIAFHTYAIQGLLENEYIGISFPVGQVRSISGHQALQNIYDTSAESESKWGNLLVL 541
            YP+SYIAFHTYAIQGLLENEYIG SF VGQVRSISG+QAL++ YD S  S SKWGNLLVL
Sbjct: 624  YPLSYIAFHTYAIQGLLENEYIGTSFAVGQVRSISGYQALRSAYDISPNSNSKWGNLLVL 683

Query: 542  FLMAVGYRILVLILLHFRAKK-LSLFRIFRCNQETN 646
            FLMAVGYRILV +LL FR +K +S  R F+CNQ TN
Sbjct: 684  FLMAVGYRILVFVLLRFRVRKNVSACRFFQCNQNTN 719


>ref|XP_002523691.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223536995|gb|EEF38631.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 722

 Score =  293 bits (749), Expect = 3e-77
 Identities = 143/212 (67%), Positives = 170/212 (80%), Gaps = 1/212 (0%)
 Frame = +2

Query: 14   EVKIYVCEESNHHSGALVFLLGQVXXXXXXXXXXXXXXXXXXYFMIGLQHEFSLLMYFVL 193
            E+KIY  EESN HSGALVFLLGQ+                  YF+IGL+ EFSLLMYFVL
Sbjct: 508  EIKIYASEESNRHSGALVFLLGQLLSSIPFLFLISISSSLVFYFLIGLRDEFSLLMYFVL 567

Query: 194  NFFMCLLVNEGLVLFITSIWQDIFWSILTLVSLHALMMLSAGYFRIRSALPGPVWMYPVS 373
            NFF+ LLVNEGL+L ITS+WQ +FWSILT+VS+H +MMLSAGYFRIR+ALPGPVW YPVS
Sbjct: 568  NFFISLLVNEGLMLLITSLWQHVFWSILTMVSIHVVMMLSAGYFRIRNALPGPVWTYPVS 627

Query: 374  YIAFHTYAIQGLLENEYIGISFPVGQVRSISGHQALQNIYDTSAESESKWGNLLVLFLMA 553
            YIAFHTY+IQGLLENEY+G SF VG+VR+ISG QAL++ YD S++S SKW N+L+LFLMA
Sbjct: 628  YIAFHTYSIQGLLENEYLGTSFAVGEVRTISGFQALRSAYDISSDSNSKWENILILFLMA 687

Query: 554  VGYRILVLILLHFR-AKKLSLFRIFRCNQETN 646
            +GYRILV I+LHFR  K  S+ +  RCNQ+TN
Sbjct: 688  IGYRILVFIVLHFRVGKSESVLKFCRCNQDTN 719


>ref|XP_002313530.1| white-brown-complex ABC transporter family [Populus trichocarpa]
            gi|222849938|gb|EEE87485.1| white-brown-complex ABC
            transporter family [Populus trichocarpa]
          Length = 573

 Score =  290 bits (742), Expect = 2e-76
 Identities = 146/220 (66%), Positives = 170/220 (77%), Gaps = 5/220 (2%)
 Frame = +2

Query: 2    AQMNEVKIYVCEESNHHSGALVFLLGQVXXXXXXXXXXXXXXXXXXYFMIGLQHEFSLLM 181
            A +NE+KIY CEESN HSGALVFLLGQ+                  YF+IGLQ EFSLLM
Sbjct: 351  ALLNEIKIYACEESNRHSGALVFLLGQLLSSIPFLFLISISSSLVLYFLIGLQDEFSLLM 410

Query: 182  YFVLNFFMCLLVNEGLVLFITSIWQDIFWSILTLVSLHALMMLSAGYFRIRSALPGPVWM 361
            YFVLNFF CLLVNEGL+L ITS+WQ +FWS+ TLVS+H +MMLSAGYFRIRS LPGP+W 
Sbjct: 411  YFVLNFFACLLVNEGLMLVITSLWQHVFWSVSTLVSIHVVMMLSAGYFRIRSVLPGPMWT 470

Query: 362  YPVSYIAFHTYAIQ----GLLENEYIGISFPVGQVRSISGHQALQNIYDTSAESESKWGN 529
            YPVSYIAFHTY+IQ    GLLENEY+  SF VG+VRSISG QAL++ YD S +S SKW N
Sbjct: 471  YPVSYIAFHTYSIQASLHGLLENEYLETSFDVGEVRSISGLQALRSAYDISPDSNSKWEN 530

Query: 530  LLVLFLMAVGYRILVLILLHFR-AKKLSLFRIFRCNQETN 646
            LLVLFLMA+GYRILV I+LHFR  K  S+ +  RCN++T+
Sbjct: 531  LLVLFLMAIGYRILVFIVLHFRVGKNESILKFCRCNRDTD 570


>ref|XP_003540196.1| PREDICTED: ABC transporter G family member 3-like [Glycine max]
          Length = 724

 Score =  287 bits (734), Expect = 2e-75
 Identities = 138/217 (63%), Positives = 166/217 (76%), Gaps = 1/217 (0%)
 Frame = +2

Query: 2    AQMNEVKIYVCEESNHHSGALVFLLGQVXXXXXXXXXXXXXXXXXXYFMIGLQHEFSLLM 181
            A M E+KIY CEESN HS  LVFLL Q+                  YF++GL+ +FSLLM
Sbjct: 505  ALMKEIKIYACEESNQHSSTLVFLLAQLLSSIPFLFLISISSSLVFYFLVGLEDQFSLLM 564

Query: 182  YFVLNFFMCLLVNEGLVLFITSIWQDIFWSILTLVSLHALMMLSAGYFRIRSALPGPVWM 361
            YFVLNFFM LLVNEGL+L + ++WQD+FWS+LTL+ +H  MMLSAGYFR+R+ALPGPVWM
Sbjct: 565  YFVLNFFMTLLVNEGLMLVVATLWQDVFWSVLTLLCIHVAMMLSAGYFRVRNALPGPVWM 624

Query: 362  YPVSYIAFHTYAIQGLLENEYIGISFPVGQVRSISGHQALQNIYDTSAESESKWGNLLVL 541
            YP+SYIAFHTY+IQGLLENEY+G SF VGQVR+ISG QALQN+Y+ S +S SKW NLLVL
Sbjct: 625  YPMSYIAFHTYSIQGLLENEYLGTSFAVGQVRTISGFQALQNVYNISPDSNSKWKNLLVL 684

Query: 542  FLMAVGYRILVLILL-HFRAKKLSLFRIFRCNQETNT 649
            FLMA+GYRI V ILL  F  +K+SL + F+CN    T
Sbjct: 685  FLMAIGYRIFVFILLFFFMGRKISLRKCFKCNNRDTT 721


>ref|XP_003638054.1| White-brown-complex ABC transporter family [Medicago truncatula]
            gi|355503989|gb|AES85192.1| White-brown-complex ABC
            transporter family [Medicago truncatula]
          Length = 725

 Score =  286 bits (731), Expect = 4e-75
 Identities = 137/217 (63%), Positives = 165/217 (76%), Gaps = 1/217 (0%)
 Frame = +2

Query: 2    AQMNEVKIYVCEESNHHSGALVFLLGQVXXXXXXXXXXXXXXXXXXYFMIGLQHEFSLLM 181
            A M E+K+Y CEESN HS   VFLL Q+                  YF++GL+ +FSLLM
Sbjct: 506  ALMKEIKVYACEESNQHSSTFVFLLAQLLSSIPFLFLISITSSLVFYFLVGLEDQFSLLM 565

Query: 182  YFVLNFFMCLLVNEGLVLFITSIWQDIFWSILTLVSLHALMMLSAGYFRIRSALPGPVWM 361
            YFVLNFFM LL+NEG++L + ++WQD+FWS+LTL+ +H +MMLSAGYFRIRS LPGPVWM
Sbjct: 566  YFVLNFFMTLLLNEGIMLVVATLWQDVFWSVLTLLCIHVVMMLSAGYFRIRSTLPGPVWM 625

Query: 362  YPVSYIAFHTYAIQGLLENEYIGISFPVGQVRSISGHQALQNIYDTSAESESKWGNLLVL 541
            YP+SYIAFHTY+IQGLLENEY+G SFPVGQVRSISG  ALQN+Y+ S +S SKW NLLVL
Sbjct: 626  YPMSYIAFHTYSIQGLLENEYLGTSFPVGQVRSISGFLALQNVYNISPDSGSKWKNLLVL 685

Query: 542  FLMAVGYRILVLILLH-FRAKKLSLFRIFRCNQETNT 649
            FLMA+GYRI V ILL  F  KK+SL + F+CN    T
Sbjct: 686  FLMAIGYRIFVFILLFLFVGKKISLLKSFKCNNRDTT 722


Top