BLASTX nr result

ID: Bupleurum21_contig00022479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022479
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264522.1| PREDICTED: thiamin pyrophosphokinase 1 isofo...   224   6e-57
ref|XP_002264561.1| PREDICTED: thiamin pyrophosphokinase 1 isofo...   224   6e-57
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]   224   6e-57
ref|XP_002264610.1| PREDICTED: thiamin pyrophosphokinase 1 isofo...   218   5e-55
ref|XP_002302706.1| predicted protein [Populus trichocarpa] gi|2...   217   7e-55

>ref|XP_002264522.1| PREDICTED: thiamin pyrophosphokinase 1 isoform 1 [Vitis vinifera]
          Length = 260

 Score =  224 bits (571), Expect = 6e-57
 Identities = 103/132 (78%), Positives = 117/132 (88%)
 Frame = +1

Query: 4   SSVRSRYKPDVIKGDMDSIRTEVLDFYKNMGTKIVDESHDQDTTDLHKCVTFIRDFHADA 183
           + VR+RYKPD +KGDMDS+RTEVL+FY N+GTKIVDESHDQDTTDLHKC+ FIRDF  D 
Sbjct: 75  NDVRNRYKPDAVKGDMDSVRTEVLEFYSNLGTKIVDESHDQDTTDLHKCIAFIRDFTPDL 134

Query: 184 EESNLCILVAGALGGRFDHEMGNINVICCFSAIRIILLSEDCLIQLLPSARHHEIRIQSS 363
           ++SNLCILVAGALGGRFDHE+GNINV+  FS +RIILLS+DCLI LLP   HHEI IQSS
Sbjct: 135 DKSNLCILVAGALGGRFDHEVGNINVLYRFSTMRIILLSDDCLIHLLPRTHHHEIHIQSS 194

Query: 364 VEGPHCGLIPIG 399
           VEGPHCGL+PIG
Sbjct: 195 VEGPHCGLVPIG 206


>ref|XP_002264561.1| PREDICTED: thiamin pyrophosphokinase 1 isoform 2 [Vitis vinifera]
          Length = 256

 Score =  224 bits (571), Expect = 6e-57
 Identities = 103/132 (78%), Positives = 117/132 (88%)
 Frame = +1

Query: 4   SSVRSRYKPDVIKGDMDSIRTEVLDFYKNMGTKIVDESHDQDTTDLHKCVTFIRDFHADA 183
           + VR+RYKPD +KGDMDS+RTEVL+FY N+GTKIVDESHDQDTTDLHKC+ FIRDF  D 
Sbjct: 71  NDVRNRYKPDAVKGDMDSVRTEVLEFYSNLGTKIVDESHDQDTTDLHKCIAFIRDFTPDL 130

Query: 184 EESNLCILVAGALGGRFDHEMGNINVICCFSAIRIILLSEDCLIQLLPSARHHEIRIQSS 363
           ++SNLCILVAGALGGRFDHE+GNINV+  FS +RIILLS+DCLI LLP   HHEI IQSS
Sbjct: 131 DKSNLCILVAGALGGRFDHEVGNINVLYRFSTMRIILLSDDCLIHLLPRTHHHEIHIQSS 190

Query: 364 VEGPHCGLIPIG 399
           VEGPHCGL+PIG
Sbjct: 191 VEGPHCGLVPIG 202


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score =  224 bits (571), Expect = 6e-57
 Identities = 103/132 (78%), Positives = 117/132 (88%)
 Frame = +1

Query: 4    SSVRSRYKPDVIKGDMDSIRTEVLDFYKNMGTKIVDESHDQDTTDLHKCVTFIRDFHADA 183
            + VR+RYKPD +KGDMDS+RTEVL+FY N+GTKIVDESHDQDTTDLHKC+ FIRDF  D 
Sbjct: 2539 NDVRNRYKPDAVKGDMDSVRTEVLEFYSNLGTKIVDESHDQDTTDLHKCIAFIRDFTPDL 2598

Query: 184  EESNLCILVAGALGGRFDHEMGNINVICCFSAIRIILLSEDCLIQLLPSARHHEIRIQSS 363
            ++SNLCILVAGALGGRFDHE+GNINV+  FS +RIILLS+DCLI LLP   HHEI IQSS
Sbjct: 2599 DKSNLCILVAGALGGRFDHEVGNINVLYRFSTMRIILLSDDCLIHLLPRTHHHEIHIQSS 2658

Query: 364  VEGPHCGLIPIG 399
            VEGPHCGL+PIG
Sbjct: 2659 VEGPHCGLVPIG 2670


>ref|XP_002264610.1| PREDICTED: thiamin pyrophosphokinase 1 isoform 3 [Vitis vinifera]
           gi|297743866|emb|CBI36836.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  218 bits (554), Expect = 5e-55
 Identities = 103/138 (74%), Positives = 117/138 (84%), Gaps = 6/138 (4%)
 Frame = +1

Query: 4   SSVRSRYKPDVIKGDMDSIRTEVLDFYKNM------GTKIVDESHDQDTTDLHKCVTFIR 165
           + VR+RYKPD +KGDMDS+RTEVL+FY N+      GTKIVDESHDQDTTDLHKC+ FIR
Sbjct: 71  NDVRNRYKPDAVKGDMDSVRTEVLEFYSNLDPALREGTKIVDESHDQDTTDLHKCIAFIR 130

Query: 166 DFHADAEESNLCILVAGALGGRFDHEMGNINVICCFSAIRIILLSEDCLIQLLPSARHHE 345
           DF  D ++SNLCILVAGALGGRFDHE+GNINV+  FS +RIILLS+DCLI LLP   HHE
Sbjct: 131 DFTPDLDKSNLCILVAGALGGRFDHEVGNINVLYRFSTMRIILLSDDCLIHLLPRTHHHE 190

Query: 346 IRIQSSVEGPHCGLIPIG 399
           I IQSSVEGPHCGL+PIG
Sbjct: 191 IHIQSSVEGPHCGLVPIG 208


>ref|XP_002302706.1| predicted protein [Populus trichocarpa] gi|222844432|gb|EEE81979.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  217 bits (553), Expect = 7e-55
 Identities = 105/133 (78%), Positives = 114/133 (85%)
 Frame = +1

Query: 1   ASSVRSRYKPDVIKGDMDSIRTEVLDFYKNMGTKIVDESHDQDTTDLHKCVTFIRDFHAD 180
           A  VR RYKPD+IKGDMDSIRTEVLDFY N+GTK+VDESHDQDTTDLHKCV +IRDF  +
Sbjct: 69  ALDVRHRYKPDMIKGDMDSIRTEVLDFYTNLGTKVVDESHDQDTTDLHKCVAYIRDFAPN 128

Query: 181 AEESNLCILVAGALGGRFDHEMGNINVICCFSAIRIILLSEDCLIQLLPSARHHEIRIQS 360
            ++SNLCILVAGALGGRFDHE GNINV+  FS  RIILLS+DCLI LLP    HEI IQS
Sbjct: 129 LDKSNLCILVAGALGGRFDHEAGNINVLYRFSTTRIILLSDDCLIYLLPRTHCHEIHIQS 188

Query: 361 SVEGPHCGLIPIG 399
           SVEGPHCGLIPIG
Sbjct: 189 SVEGPHCGLIPIG 201


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