BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022475
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vi...    73   3e-11
emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]    73   3e-11
ref|XP_002515957.1| nucleic acid binding protein, putative [Rici...    65   4e-09
ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus c...    55   6e-06

>ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 770

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/86 (38%), Positives = 56/86 (65%)
 Frame = -3

Query: 282 LPSYIFPDGYRRSRPPRQHHEQSSPIDEGCRPGSVGRQPRKRREFDVANAQGSPEKRQCS 103
           +PSY+FP+GY+RSRP R  ++Q    DE CR GS  +  +++++ +  + +     ++ +
Sbjct: 487 IPSYVFPEGYKRSRPQRPVNQQQG--DEACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLT 544

Query: 102 ASPQKRDSLSPEIITHVDRDVPKECS 25
            SPQ++DS+SPEII+H      +ECS
Sbjct: 545 ISPQRQDSVSPEIISHRFSSSSQECS 570


>emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
          Length = 778

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/86 (38%), Positives = 56/86 (65%)
 Frame = -3

Query: 282 LPSYIFPDGYRRSRPPRQHHEQSSPIDEGCRPGSVGRQPRKRREFDVANAQGSPEKRQCS 103
           +PSY+FP+GY+RSRP R  ++Q    DE CR GS  +  +++++ +  + +     ++ +
Sbjct: 478 IPSYVFPEGYKRSRPQRPVNQQQG--DEACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLT 535

Query: 102 ASPQKRDSLSPEIITHVDRDVPKECS 25
            SPQ++DS+SPEII+H      +ECS
Sbjct: 536 ISPQRQDSVSPEIISHRFSSSSQECS 561


>ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223544862|gb|EEF46377.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 712

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
 Frame = -3

Query: 282 LPSYIFPDGYRRSRPPRQHHEQSSPIDEGC-------RPGSVGRQPRKRREFDVANAQGS 124
           +PSY+FPDGYRR+R PR   +Q S  D+ C         GS  R  +++++ D  + +  
Sbjct: 449 IPSYVFPDGYRRARHPRVTAQQQS--DKTCCGDSDAYGNGSSERGHKRKKDSDEIDVKND 506

Query: 123 PEKRQCSASPQKRDSLSPEIITHVDRDVPKECSLL 19
             +++ S SPQ+RDS+SP+I TH       ECS +
Sbjct: 507 MPEKRNSISPQRRDSVSPDIFTHKFGGPSSECSAI 541


>ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
           gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta,
           putative [Ricinus communis]
          Length = 754

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = -3

Query: 282 LPSYIFPDGYRRSRPPRQHHEQS---SPIDEGCRPGSVGRQPRKRREFDVANAQGSPEKR 112
           LP+++FPDGY+RSR  R  ++Q+   S +    R GSV    +++ + +V + +    ++
Sbjct: 495 LPAFVFPDGYKRSRTSRHPNQQAGKPSDVSATSRAGSVEGHLKRKNDHEVVDVRPDKPEK 554

Query: 111 QCSASPQKRDSLSPE 67
           + S SPQ+  S+SPE
Sbjct: 555 RASVSPQRLQSVSPE 569