BLASTX nr result

ID: Bupleurum21_contig00022449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022449
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002442328.1| hypothetical protein SORBIDRAFT_08g018265 [S...    68   8e-22
ref|XP_002445432.1| hypothetical protein SORBIDRAFT_07g019100 [S...    63   2e-20
ref|XP_002450209.1| hypothetical protein SORBIDRAFT_05g001992 [S...    71   3e-18
ref|XP_002461850.1| hypothetical protein SORBIDRAFT_02g009233 [S...    60   2e-14
ref|XP_002467514.1| hypothetical protein SORBIDRAFT_01g029385 [S...    65   2e-13

>ref|XP_002442328.1| hypothetical protein SORBIDRAFT_08g018265 [Sorghum bicolor]
           gi|241943021|gb|EES16166.1| hypothetical protein
           SORBIDRAFT_08g018265 [Sorghum bicolor]
          Length = 422

 Score = 68.2 bits (165), Expect(2) = 8e-22
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = +2

Query: 317 WWDAYGGRAIELQSFAKRIVGLCCSSSGCERNWSTF 424
           WWDA+G  A ELQS AKRIV LCCS+SGCERNWS F
Sbjct: 385 WWDAFGVHAFELQSLAKRIVSLCCSASGCERNWSAF 420



 Score = 60.5 bits (145), Expect(2) = 8e-22
 Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = +3

Query: 6   LFLNPGKYFDIIENDHDYASRLREDFNDVLEKMEKDREIRNKISDSADAY-KNSREGFAR 182
           LFLNPGKYF I E D   A +LR  FND++ KM  D     KIS  AD Y +   E F++
Sbjct: 311 LFLNPGKYFAIKEKDMRQARKLRCMFNDIVWKMVPDESEARKISKQADDYDRAGGESFSK 370

Query: 183 EMAIEQRKTKSP 218
            +AI +R  K+P
Sbjct: 371 RLAIIERNNKNP 382


>ref|XP_002445432.1| hypothetical protein SORBIDRAFT_07g019100 [Sorghum bicolor]
           gi|241941782|gb|EES14927.1| hypothetical protein
           SORBIDRAFT_07g019100 [Sorghum bicolor]
          Length = 423

 Score = 62.8 bits (151), Expect(2) = 2e-20
 Identities = 26/36 (72%), Positives = 27/36 (75%)
 Frame = +2

Query: 317 WWDAYGGRAIELQSFAKRIVGLCCSSSGCERNWSTF 424
           WW AY G   ELQ  AKRIV LCCS+SGCERNWS F
Sbjct: 236 WWRAYSGLTYELQCLAKRIVSLCCSASGCERNWSEF 271



 Score = 60.8 bits (146), Expect(2) = 2e-20
 Identities = 35/73 (47%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   ALFLNPGKYFDIIENDHDYASRLREDFNDVLEKMEKDREIRNKISDSADAYKNSR-EGFA 179
           AL+LNP K+F I E D   A RLR  FN VL KM  + E +NKIS   D Y+ +  E F+
Sbjct: 161 ALYLNPNKFFAIKEKDRRQAHRLRIMFNKVLWKMVSEEEEQNKISMQEDDYERAEGESFS 220

Query: 180 REMAIEQRKTKSP 218
             MAI  R+ K+P
Sbjct: 221 MPMAIRDRERKNP 233


>ref|XP_002450209.1| hypothetical protein SORBIDRAFT_05g001992 [Sorghum bicolor]
           gi|241936052|gb|EES09197.1| hypothetical protein
           SORBIDRAFT_05g001992 [Sorghum bicolor]
          Length = 378

 Score = 71.2 bits (173), Expect(2) = 3e-18
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = +2

Query: 311 VDWWDAYGGRAIELQSFAKRIVGLCCSSSGCERNWSTF 424
           +DWW +YGGRAIELQ FAKRIV LC SSS CERNWSTF
Sbjct: 244 LDWWCSYGGRAIELQRFAKRIVSLCASSSCCERNWSTF 281



 Score = 45.1 bits (105), Expect(2) = 3e-18
 Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = +3

Query: 3   ALFLNPGKYFDIIE-NDHDYASRLREDFNDVLEKMEKDREIRNKISDSADAYKNSR-EGF 176
           AL+LNP + + +I+ ND     +LR  F DVL +M +D+EIR+KI   +  Y+  R + F
Sbjct: 170 ALYLNPARLYSLIQANDDATVGQLRGCFLDVLGRMVQDKEIRSKIDAQSLDYEGLRGDAF 229

Query: 177 AREMAIEQRKTKSP 218
           + ++A +  +  +P
Sbjct: 230 SNKLAKQNLQNLNP 243


>ref|XP_002461850.1| hypothetical protein SORBIDRAFT_02g009233 [Sorghum bicolor]
           gi|241925227|gb|EER98371.1| hypothetical protein
           SORBIDRAFT_02g009233 [Sorghum bicolor]
          Length = 125

 Score = 60.1 bits (144), Expect(2) = 2e-14
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +2

Query: 308 LVDWWDAYGGRAIELQSFAKRIVGLCCSSSGCERN 412
           L+DWW +YGG AIELQ FA+RIV LC SSS CERN
Sbjct: 91  LLDWWRSYGGCAIELQRFARRIVSLCASSSSCERN 125



 Score = 43.5 bits (101), Expect(2) = 2e-14
 Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
 Frame = +3

Query: 3   ALFLNPGKYFDIIE-NDHDYASRLREDFNDVLEKMEKDREIRNKISDSADAYKNSR-EGF 176
           AL+LN G+   +I+ ND     +LR  F DVLE++ +D EIRNKI   +  Y+  R + F
Sbjct: 18  ALYLNLGRLHSLIQANDDAIVGQLRGCFLDVLERLVEDEEIRNKIDAQSLDYEGLRGDAF 77

Query: 177 AREMA 191
           + ++A
Sbjct: 78  SNKLA 82


>ref|XP_002467514.1| hypothetical protein SORBIDRAFT_01g029385 [Sorghum bicolor]
           gi|241921368|gb|EER94512.1| hypothetical protein
           SORBIDRAFT_01g029385 [Sorghum bicolor]
          Length = 277

 Score = 64.7 bits (156), Expect(2) = 2e-13
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = +2

Query: 311 VDWWDAYGGRAIELQSFAKRIVGLCCSSSGCERN 412
           +DWW +YGGRAIELQ FAKRIV LC SSSGCERN
Sbjct: 244 LDWWCSYGGRAIELQRFAKRIVSLCASSSGCERN 277



 Score = 35.8 bits (81), Expect(2) = 2e-13
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +3

Query: 3   ALFLNPGKYFDIIE-NDHDYASRLREDFNDVLEKMEKDREIRNKISDSADAYKNSR-EGF 176
           AL+L   +   +I+ ND     +LR  F DVL +M +D EIR+KI   +  Y+  R + F
Sbjct: 170 ALYLKLARLHSLIQANDDATVGQLRGCFLDVLGRMVEDEEIRSKIDAQSLDYEGLRGDAF 229

Query: 177 AREMAIEQRKTKSP 218
           + ++A +     +P
Sbjct: 230 SNKLAKQNLHNLNP 243


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