BLASTX nr result

ID: Bupleurum21_contig00022438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022438
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528249.1| conserved hypothetical protein [Ricinus comm...   209   7e-52
ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatul...   209   7e-52
emb|CBI33909.3| unnamed protein product [Vitis vinifera]              207   2e-51
ref|XP_002281099.1| PREDICTED: protein LOL1-like [Vitis vinifera]     207   2e-51
gb|AFK36740.1| unknown [Lotus japonicus]                              207   2e-51

>ref|XP_002528249.1| conserved hypothetical protein [Ricinus communis]
           gi|223532335|gb|EEF34134.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score =  209 bits (531), Expect = 7e-52
 Identities = 101/126 (80%), Positives = 109/126 (86%)
 Frame = -3

Query: 657 NGSQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 478
           NG+QSQLVCSGCRNLLLYP GATS              PGTEMAQLVCGGCHTLLMYIRG
Sbjct: 22  NGAQSQLVCSGCRNLLLYPAGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRG 81

Query: 477 ATSVQCSCCHTVNLALEANQVAHVHCGNCQMMLMYQYGARSVKCAVCNFVTSVGASTSTP 298
           ATSVQCSCCHT+NLA+EANQVAHV+CGNC+M+LMYQYGARSVKC+VCNFVT+VGASTST 
Sbjct: 82  ATSVQCSCCHTINLAMEANQVAHVNCGNCRMLLMYQYGARSVKCSVCNFVTAVGASTST- 140

Query: 297 TEQKLN 280
           TEQK N
Sbjct: 141 TEQKFN 146


>ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatula]
           gi|217075072|gb|ACJ85896.1| unknown [Medicago
           truncatula] gi|217075520|gb|ACJ86120.1| unknown
           [Medicago truncatula] gi|355509677|gb|AES90819.1| Zinc
           finger protein LSD1 [Medicago truncatula]
           gi|388499772|gb|AFK37952.1| unknown [Medicago
           truncatula] gi|388500106|gb|AFK38119.1| unknown
           [Medicago truncatula]
          Length = 154

 Score =  209 bits (531), Expect = 7e-52
 Identities = 101/126 (80%), Positives = 107/126 (84%)
 Frame = -3

Query: 657 NGSQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 478
           NG+QSQLVCSGCRNLL+YPVGATS              PGTEMAQLVCGGCHTLLMYIRG
Sbjct: 28  NGAQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRG 87

Query: 477 ATSVQCSCCHTVNLALEANQVAHVHCGNCQMMLMYQYGARSVKCAVCNFVTSVGASTSTP 298
           ATSVQCSCCHTVNLALEANQVAHV+CGNC+M+LMYQYGARSVKCAVCNFVTSVGAS ST 
Sbjct: 88  ATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASASTT 147

Query: 297 TEQKLN 280
             QK +
Sbjct: 148 EPQKFS 153


>emb|CBI33909.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  207 bits (528), Expect = 2e-51
 Identities = 102/126 (80%), Positives = 108/126 (85%)
 Frame = -3

Query: 657 NGSQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 478
           NG+QSQLVCSGCRNLLLYPVGA S              PGTEMAQLVCGGCHTLLMYIRG
Sbjct: 105 NGAQSQLVCSGCRNLLLYPVGAKSVCCAVCNVVTAVPLPGTEMAQLVCGGCHTLLMYIRG 164

Query: 477 ATSVQCSCCHTVNLALEANQVAHVHCGNCQMMLMYQYGARSVKCAVCNFVTSVGASTSTP 298
           ATSVQCSCCHT+NLALEANQVAHV+CGNC+M+LMYQYGARSVKCAVCNFVTSVGASTS+ 
Sbjct: 165 ATSVQCSCCHTINLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASTSS- 223

Query: 297 TEQKLN 280
           TE K N
Sbjct: 224 TEHKFN 229


>ref|XP_002281099.1| PREDICTED: protein LOL1-like [Vitis vinifera]
          Length = 145

 Score =  207 bits (528), Expect = 2e-51
 Identities = 102/126 (80%), Positives = 108/126 (85%)
 Frame = -3

Query: 657 NGSQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 478
           NG+QSQLVCSGCRNLLLYPVGA S              PGTEMAQLVCGGCHTLLMYIRG
Sbjct: 20  NGAQSQLVCSGCRNLLLYPVGAKSVCCAVCNVVTAVPLPGTEMAQLVCGGCHTLLMYIRG 79

Query: 477 ATSVQCSCCHTVNLALEANQVAHVHCGNCQMMLMYQYGARSVKCAVCNFVTSVGASTSTP 298
           ATSVQCSCCHT+NLALEANQVAHV+CGNC+M+LMYQYGARSVKCAVCNFVTSVGASTS+ 
Sbjct: 80  ATSVQCSCCHTINLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASTSS- 138

Query: 297 TEQKLN 280
           TE K N
Sbjct: 139 TEHKFN 144


>gb|AFK36740.1| unknown [Lotus japonicus]
          Length = 145

 Score =  207 bits (527), Expect = 2e-51
 Identities = 102/126 (80%), Positives = 108/126 (85%)
 Frame = -3

Query: 657 NGSQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRG 478
           NG+QSQLVCSGCRNLL+YPVGATS              PGTEMAQLVCGGCHTLLMYIRG
Sbjct: 20  NGAQSQLVCSGCRNLLVYPVGATSVCCAVCNAVTSVPPPGTEMAQLVCGGCHTLLMYIRG 79

Query: 477 ATSVQCSCCHTVNLALEANQVAHVHCGNCQMMLMYQYGARSVKCAVCNFVTSVGASTSTP 298
           ATSVQCSCCHTVNLALEANQVAHV+CGNC+M+LMYQYGARSVKCAVCNFVTSVG S ST 
Sbjct: 80  ATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGTSAST- 138

Query: 297 TEQKLN 280
           TEQK +
Sbjct: 139 TEQKFS 144


Top