BLASTX nr result
ID: Bupleurum21_contig00022427
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00022427
(1243 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi... 429 e-118
emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera] 425 e-116
ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|2... 401 e-109
ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|2... 394 e-107
ref|XP_002512576.1| pentatricopeptide repeat-containing protein,... 380 e-103
>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62590-like
[Vitis vinifera]
Length = 730
Score = 429 bits (1103), Expect = e-118
Identities = 215/395 (54%), Positives = 282/395 (71%), Gaps = 2/395 (0%)
Frame = -2
Query: 1179 RWVPLYMKYTSLSCASELQIIPETDQKHL--SSVNIEEKVKFLKNKLSSDSLTRVLDSTY 1006
+WVPL +S+SCA+ +Q +PE DQ + E K +FL+N+L D L RVLD+T+
Sbjct: 16 KWVPLIASMSSISCANRIQAVPEIDQTKTPPNDNEFEPKFQFLRNRLMPDDLIRVLDTTH 75
Query: 1005 DVKSSLKLFKWASLRNRFKHNVDTYYRIILKLGMSGMIDEMEGFCKEMIKEKCVGFEEAL 826
D+ S++K+FKWAS + RF+H DTY+R+ILKLGM G I++ME FC EM++EKC G EE L
Sbjct: 76 DLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAFCSEMVREKCPGGEETL 135
Query: 825 LRLLDLFVKEGRLDEALRVFATLMSSGCKMSIGVLNFLMSSLVEEKKDLRSVLFVYKEMV 646
+ L+ FVK RL EA+RV + S+G K SI N L+ +LV E++D R +L VYKE+V
Sbjct: 136 IALISSFVKHRRLSEAIRVLVIMTSNGYKFSIIEFNGLLGALVRERRDFREILLVYKEIV 195
Query: 645 KGGVIPTVETLNYLLEALFEANQVDLALNQYRRMRKKGCSPSSRTFEIVISSLIARDHKG 466
K G++P V+TLNYL+EALFE N +DLAL+QYRRM KKGCSP+S+TF+I+IS LIAR+
Sbjct: 196 KAGIVPNVDTLNYLIEALFELNWIDLALDQYRRMSKKGCSPNSKTFDILISGLIARNLVE 255
Query: 465 EAMVVLREMSELGCEPDFMFYIHIIPIFCTINELVVGMRLFKSMRASHIVPDSLTYGVLI 286
+++VVL EM EL CE D FY +IP+FC+++++ GM LF MRAS +VPD L Y VLI
Sbjct: 256 KSVVVLGEMIELECEADLSFYTSVIPLFCSVHQVEEGMMLFWRMRASKLVPDLLIYRVLI 315
Query: 285 KCLCENLCVDDAIVLLDEMEELNLVPPDHVFVDIVKGFCSSSKLVEATKFLQDKHVLDTY 106
+CL E+L +DDAI LL+EM L P D VFV IVKGFC K EA FL+DK V T
Sbjct: 316 QCLSESLWLDDAINLLEEMIGCGLTPEDDVFVYIVKGFCKLGKFNEAEFFLKDKCVFGTD 375
Query: 105 SHNALLEGYCTAGDLFGAKKVFDRMAEMNIADDIS 1
HNALLEGYCTAGD GAK +++ + NI D+ S
Sbjct: 376 PHNALLEGYCTAGDFHGAKVFLEKIFDRNIIDNFS 410
>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
Length = 730
Score = 425 bits (1093), Expect = e-116
Identities = 214/395 (54%), Positives = 281/395 (71%), Gaps = 2/395 (0%)
Frame = -2
Query: 1179 RWVPLYMKYTSLSCASELQIIPETDQKHL--SSVNIEEKVKFLKNKLSSDSLTRVLDSTY 1006
+WVPL +S+S A+ +Q +PE DQ + E K +FL+N+L D L RVLD+T+
Sbjct: 16 KWVPLIASMSSISSANRIQAVPEIDQTKTPPNDNEFEPKFQFLRNRLMPDDLIRVLDTTH 75
Query: 1005 DVKSSLKLFKWASLRNRFKHNVDTYYRIILKLGMSGMIDEMEGFCKEMIKEKCVGFEEAL 826
D+ S++K+FKWAS + RF+H DTY+R+ILKLGM G I++ME FC EM++EKC G EE L
Sbjct: 76 DLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAFCSEMVREKCPGGEETL 135
Query: 825 LRLLDLFVKEGRLDEALRVFATLMSSGCKMSIGVLNFLMSSLVEEKKDLRSVLFVYKEMV 646
+ L+ FVK RL EA+RV + S+G K SI N L+ +LV E++D R +L VYKE+V
Sbjct: 136 IALISSFVKHRRLSEAIRVLVIMTSNGYKFSIIEFNGLLGALVRERRDFREILLVYKEIV 195
Query: 645 KGGVIPTVETLNYLLEALFEANQVDLALNQYRRMRKKGCSPSSRTFEIVISSLIARDHKG 466
K G++P V+TLNYL+EALFE N +DLAL+QYRRM KKGCSP+S+TF+I+IS LIAR+
Sbjct: 196 KAGIVPNVDTLNYLIEALFELNWIDLALDQYRRMSKKGCSPNSKTFDILISGLIARNLVE 255
Query: 465 EAMVVLREMSELGCEPDFMFYIHIIPIFCTINELVVGMRLFKSMRASHIVPDSLTYGVLI 286
+++VVL EM EL CE D FY +IP+FC+++++ GM LF MRAS +VPD L Y VLI
Sbjct: 256 KSVVVLGEMIELECEADLSFYTSVIPLFCSVHQVEEGMMLFWRMRASKLVPDLLIYRVLI 315
Query: 285 KCLCENLCVDDAIVLLDEMEELNLVPPDHVFVDIVKGFCSSSKLVEATKFLQDKHVLDTY 106
+CL E+L +DDAI LL+EM L P D VFV IVKGFC K EA FL+DK V T
Sbjct: 316 QCLSESLWLDDAINLLEEMIGCGLTPEDDVFVYIVKGFCKLGKFNEAEFFLKDKCVFGTD 375
Query: 105 SHNALLEGYCTAGDLFGAKKVFDRMAEMNIADDIS 1
HNALLEGYCTAGD GAK +++ + NI D+ S
Sbjct: 376 PHNALLEGYCTAGDFHGAKVFLEKIFDRNIIDNFS 410
>ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|222871421|gb|EEF08552.1|
predicted protein [Populus trichocarpa]
Length = 725
Score = 401 bits (1030), Expect = e-109
Identities = 199/396 (50%), Positives = 276/396 (69%), Gaps = 1/396 (0%)
Frame = -2
Query: 1194 FTKKL-RWVPLYMKYTSLSCASELQIIPETDQKHLSSVNIEEKVKFLKNKLSSDSLTRVL 1018
F K++ +WV L +S+SC + +QI PE +Q + + + K++ L+NKL D+L +VL
Sbjct: 7 FLKRIPKWVNLKAFISSVSCTNTIQINPEINQNTPNFPDFDVKIQSLRNKLYPDNLIKVL 66
Query: 1017 DSTYDVKSSLKLFKWASLRNRFKHNVDTYYRIILKLGMSGMIDEMEGFCKEMIKEKCVGF 838
ST DV S++K+FKWA+L+ +F H DTYY II KLGM+G ++EMEGFC+ M+KE+C G
Sbjct: 67 KSTSDVNSAVKIFKWAALQRKFNHTADTYYWIIFKLGMAGNVEEMEGFCQNMVKERCTGE 126
Query: 837 EEALLRLLDLFVKEGRLDEALRVFATLMSSGCKMSIGVLNFLMSSLVEEKKDLRSVLFVY 658
E+ L+ L+D FV+ RL+EA+RV + +G K SI V NF++ +LVEEK+ + V+FVY
Sbjct: 127 EDVLVSLVDAFVRNCRLNEAMRVLFNMNLAGIKPSIDVFNFVLGALVEEKRGFQDVVFVY 186
Query: 657 KEMVKGGVIPTVETLNYLLEALFEANQVDLALNQYRRMRKKGCSPSSRTFEIVISSLIAR 478
KEMVK GV P+++TLNYLLE LFE ++VD AL+QYRR+ KKGC P +TFEIVI LIA
Sbjct: 187 KEMVKAGVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKGCRPDGKTFEIVIKGLIAN 246
Query: 477 DHKGEAMVVLREMSELGCEPDFMFYIHIIPIFCTINELVVGMRLFKSMRASHIVPDSLTY 298
D +++ +L EM ELGC P+ FY IP+FC + L G+RLF+ M+ S+ PDS Y
Sbjct: 247 DRVDDSVSILHEMLELGCLPELSFYRTTIPLFCREDRLEEGIRLFRKMKESNFTPDSFIY 306
Query: 297 GVLIKCLCENLCVDDAIVLLDEMEELNLVPPDHVFVDIVKGFCSSSKLVEATKFLQDKHV 118
G LI+CLC+ L +D+A+ LL+EM E L ++VFVD+V GFC K+ EA K L+DKHV
Sbjct: 307 GALIQCLCKQLRLDEAVNLLEEMMESQLEGDNNVFVDVVNGFCKLGKINEAVKLLEDKHV 366
Query: 117 LDTYSHNALLEGYCTAGDLFGAKKVFDRMAEMNIAD 10
L+T HNALL C A AK + ++M+E NI D
Sbjct: 367 LETSPHNALLRCCCDADKFLMAKGLLEKMSERNIDD 402
>ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|222857302|gb|EEE94849.1|
predicted protein [Populus trichocarpa]
Length = 724
Score = 394 bits (1012), Expect = e-107
Identities = 198/390 (50%), Positives = 271/390 (69%)
Frame = -2
Query: 1179 RWVPLYMKYTSLSCASELQIIPETDQKHLSSVNIEEKVKFLKNKLSSDSLTRVLDSTYDV 1000
+W+ L +S+SC + +QI PE +Q + + + K++ L+NKL D L +VL ST D+
Sbjct: 13 KWLNLKSFISSVSCTNAIQINPEINQNAPNITDFDAKIQSLRNKLCPDYLIKVLKSTSDI 72
Query: 999 KSSLKLFKWASLRNRFKHNVDTYYRIILKLGMSGMIDEMEGFCKEMIKEKCVGFEEALLR 820
S++KLFKWASL+ RF H DTYY II KLGM+ ++EMEGFC+ M+K++C G E+ LL
Sbjct: 73 NSAVKLFKWASLQRRFNHTDDTYYWIIFKLGMAENVEEMEGFCQNMVKDRCPGVEDVLLS 132
Query: 819 LLDLFVKEGRLDEALRVFATLMSSGCKMSIGVLNFLMSSLVEEKKDLRSVLFVYKEMVKG 640
L+D FV+ RL+EALRV + +G K SI V NF++ +LVEEK+ + V+FVYKEMVK
Sbjct: 133 LVDAFVRNCRLNEALRVLFNMNLAGIKPSIDVFNFVLGALVEEKRGFQDVVFVYKEMVKA 192
Query: 639 GVIPTVETLNYLLEALFEANQVDLALNQYRRMRKKGCSPSSRTFEIVISSLIARDHKGEA 460
GV P+++TLNYLLE LFE ++VD AL+QYRR+ KKGC P+SRTFEIVI LIA++ ++
Sbjct: 193 GVAPSIDTLNYLLEVLFETDRVDSALDQYRRINKKGCIPNSRTFEIVIKGLIAKNRVDDS 252
Query: 459 MVVLREMSELGCEPDFMFYIHIIPIFCTINELVVGMRLFKSMRASHIVPDSLTYGVLIKC 280
+ +L EM ELGC P+ F+ I +FC + L G+RLF+ M+ S+ PD YG LI+C
Sbjct: 253 VTILHEMLELGCLPELRFFRSTILLFCGEDRLQQGIRLFRKMKDSNFTPDPFIYGALIQC 312
Query: 279 LCENLCVDDAIVLLDEMEELNLVPPDHVFVDIVKGFCSSSKLVEATKFLQDKHVLDTYSH 100
LC++L +D+A LL+EM E L P ++VFVDIV GFC K+ EA K L+DKHV T H
Sbjct: 313 LCKHLRLDEAANLLEEMMESRLTPDNNVFVDIVNGFCKLGKINEAIKLLEDKHVHVTSPH 372
Query: 99 NALLEGYCTAGDLFGAKKVFDRMAEMNIAD 10
NALL C A F AK + ++M+E NI D
Sbjct: 373 NALLRCCCDADKFFMAKGLLEKMSERNIDD 402
>ref|XP_002512576.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548537|gb|EEF50028.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 739
Score = 380 bits (976), Expect = e-103
Identities = 190/390 (48%), Positives = 262/390 (67%)
Frame = -2
Query: 1179 RWVPLYMKYTSLSCASELQIIPETDQKHLSSVNIEEKVKFLKNKLSSDSLTRVLDSTYDV 1000
RWV L S+SC S +QI PE DQ L++ + + K+ L+NKL DSL +VL ST D+
Sbjct: 27 RWVNLNSALFSVSCTSSIQINPEIDQSILNTTDFDAKIHILRNKLYPDSLIKVLQSTSDI 86
Query: 999 KSSLKLFKWASLRNRFKHNVDTYYRIILKLGMSGMIDEMEGFCKEMIKEKCVGFEEALLR 820
S++K+FKWASL+ RF H DTY+ IILKLG++G + EMEGFC+ +K+ C G E A+
Sbjct: 87 NSAVKIFKWASLQKRFNHTSDTYFWIILKLGLAGNLKEMEGFCQNWVKDGCSGVEHAVFS 146
Query: 819 LLDLFVKEGRLDEALRVFATLMSSGCKMSIGVLNFLMSSLVEEKKDLRSVLFVYKEMVKG 640
L+ FV+ RL+EA+ + L G K SI V N ++ +LVE+KK + V+FVYKEMVK
Sbjct: 147 LIASFVRHHRLNEAICILVNLCLGGYKPSINVFNMILGALVEDKKGFKEVVFVYKEMVKA 206
Query: 639 GVIPTVETLNYLLEALFEANQVDLALNQYRRMRKKGCSPSSRTFEIVISSLIARDHKGEA 460
GV PT++TLN+L+E LF+ +VD AL+QYRRM KKGCS +SRTF+IVI LI + E+
Sbjct: 207 GVAPTIDTLNHLMEVLFDTGRVDSALDQYRRMNKKGCSRNSRTFQIVIKGLIVNNQVDES 266
Query: 459 MVVLREMSELGCEPDFMFYIHIIPIFCTINELVVGMRLFKSMRASHIVPDSLTYGVLIKC 280
+ +L EM +GC P+ FY IIP C ++ +RLF+ MRAS VP+S+ YG LI+C
Sbjct: 267 IAILHEMLNIGCLPELSFYTCIIPELCREHKSEEAIRLFRMMRASKFVPNSVIYGALIQC 326
Query: 279 LCENLCVDDAIVLLDEMEELNLVPPDHVFVDIVKGFCSSSKLVEATKFLQDKHVLDTYSH 100
C+NL +DDA+ LL+EM E L P + V +D+V FC K EA KFL+D +VL+T +
Sbjct: 327 FCKNLQLDDAVNLLEEMVESCLTPDNDVVIDVVIAFCRLGKTNEAAKFLEDINVLETSPY 386
Query: 99 NALLEGYCTAGDLFGAKKVFDRMAEMNIAD 10
N LL C AG AK + ++M+E ++AD
Sbjct: 387 NTLLGACCDAGKFIEAKGLLEKMSERSLAD 416