BLASTX nr result

ID: Bupleurum21_contig00022424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022424
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_176252.1| Dynamin related protein 4C [Arabidopsis thalian...    92   4e-17
ref|XP_003524214.1| PREDICTED: interferon-induced GTP-binding pr...    90   2e-16
ref|XP_002888140.1| dynamin family protein [Arabidopsis lyrata s...    89   4e-16
ref|XP_002888135.1| hypothetical protein ARALYDRAFT_338323 [Arab...    88   8e-16
ref|XP_002888137.1| hypothetical protein ARALYDRAFT_893494 [Arab...    87   1e-15

>ref|NP_176252.1| Dynamin related protein 4C [Arabidopsis thaliana]
           gi|75338812|sp|Q9ZP55.1|DRP4C_ARATH RecName:
           Full=Dynamin-related protein 4C
           gi|2462747|gb|AAB71966.1| similar to 'Mx' GTP-binding
           proteins [Arabidopsis thaliana]
           gi|332195573|gb|AEE33694.1| Dynamin related protein 4C
           [Arabidopsis thaliana]
          Length = 669

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/99 (44%), Positives = 66/99 (66%)
 Frame = +3

Query: 3   RAALNVISKMKEQSTNRVMEIIEMESIADYTCDPEYMATWSKLITSRDAFKKAFDNKDGA 182
           RA  N+ISK+KEQS NRVMEI+EME + DYTC+PEYM +W++  +++++F  A    +  
Sbjct: 488 RAGRNLISKIKEQSVNRVMEIVEMEKLTDYTCNPEYMTSWTQKTSAQESFIDAVVKNENI 547

Query: 183 SSIVVNIEGFGSVDVKHLCVYPDSVRDEAFDLKMRLIAY 299
                ++ GFG+V + HL  Y   +   AFD+KMR+ +Y
Sbjct: 548 PD-YFSVTGFGNVKISHLRKYHAHLLIPAFDMKMRITSY 585


>ref|XP_003524214.1| PREDICTED: interferon-induced GTP-binding protein Mx2-like [Glycine
           max]
          Length = 675

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/100 (48%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   RAALNVISKMKEQSTNRVMEIIEMESIADYTCDPEYMATWSKLITSRDAF-KKAFDNKDG 179
           RA+  +ISK K  ST  V E I+ME   DYTC+PE++  ++KLI+ +DAF     +N+D 
Sbjct: 493 RASEVLISKKKISSTKHVREAIQMEMHTDYTCNPEFVKEYNKLISQQDAFLNDVLNNEDN 552

Query: 180 ASSIVVNIEGFGSVDVKHLCVYPDSVRDEAFDLKMRLIAY 299
            S   VN+EG G+++V HL  YP SV  +AFDLK+R+I+Y
Sbjct: 553 PSH--VNLEGVGNIEVGHLRQYPSSVLAQAFDLKVRMISY 590


>ref|XP_002888140.1| dynamin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333981|gb|EFH64399.1| dynamin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 671

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/100 (45%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   RAALNVISKMKEQSTNRVMEIIEMESIADYTCDPEYMATWSKLITSRDAFKKAFD-NKDG 179
           RA  N+ISK+KEQS NRVMEI+EME + DYTC PEYM +W++    +++F   +D  K+G
Sbjct: 490 RAGRNLISKIKEQSVNRVMEIVEMEKLTDYTCSPEYMTSWTQKTGEQESF--MYDVLKNG 547

Query: 180 ASSIVVNIEGFGSVDVKHLCVYPDSVRDEAFDLKMRLIAY 299
                 ++ GFG+V + HL  Y   +   AFD+K+R+ +Y
Sbjct: 548 NKPDYFSMSGFGNVKISHLRKYHAHLLIPAFDMKIRITSY 587


>ref|XP_002888135.1| hypothetical protein ARALYDRAFT_338323 [Arabidopsis lyrata subsp.
           lyrata] gi|297333976|gb|EFH64394.1| hypothetical protein
           ARALYDRAFT_338323 [Arabidopsis lyrata subsp. lyrata]
          Length = 679

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/99 (42%), Positives = 68/99 (68%)
 Frame = +3

Query: 3   RAALNVISKMKEQSTNRVMEIIEMESIADYTCDPEYMATWSKLITSRDAFKKAFDNKDGA 182
           RA  N+I+K+KEQS +RV+EIIEME + DYTC+PEYM  +++ I ++ +F  A  + + +
Sbjct: 493 RAGRNLITKIKEQSVSRVIEIIEMEKLTDYTCNPEYMTVYTEKIAAQGSFITAV-HSNNS 551

Query: 183 SSIVVNIEGFGSVDVKHLCVYPDSVRDEAFDLKMRLIAY 299
           ++  +N  GFG V + HL  Y   +  +AFD+K+R+ +Y
Sbjct: 552 NNCNLNASGFGIVQISHLRKYDAQLLRQAFDMKVRITSY 590


>ref|XP_002888137.1| hypothetical protein ARALYDRAFT_893494 [Arabidopsis lyrata subsp.
           lyrata] gi|297333978|gb|EFH64396.1| hypothetical protein
           ARALYDRAFT_893494 [Arabidopsis lyrata subsp. lyrata]
          Length = 255

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/99 (45%), Positives = 65/99 (65%)
 Frame = +3

Query: 3   RAALNVISKMKEQSTNRVMEIIEMESIADYTCDPEYMATWSKLITSRDAFKKAFDNKDGA 182
           RA  N+I+K+KEQS +RV+EIIEME + DYTC+PEYM  +++ I ++ +F  A    DG 
Sbjct: 74  RAGRNLITKIKEQSVSRVIEIIEMEKLTDYTCNPEYMTVYTEKIAAQGSFITAV--LDGY 131

Query: 183 SSIVVNIEGFGSVDVKHLCVYPDSVRDEAFDLKMRLIAY 299
           S   +   GFG V + HL  Y   +  +AF++KMR+ AY
Sbjct: 132 SKYSLTGYGFGEVKILHLRKYDAQLLRQAFEMKMRITAY 170


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