BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022404
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   392   e-107
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             392   e-107
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             387   e-105
emb|CAH67397.1| H0115B09.9 [Oryza sativa Indica Group]                361   1e-97
emb|CAD41263.1| OSJNBb0103I08.2 [Oryza sativa Japonica Group] gi...   361   1e-97

>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  392 bits (1008), Expect = e-107
 Identities = 191/287 (66%), Positives = 229/287 (79%)
 Frame = +2

Query: 5    ERAEALKDEVSKLLKAGLIRESFYPTWLANPVLVKKPNGKWRTCVDFTDLNKACPKDSFP 184
            ERA+A+ DEV KLLK G IRE  YP WLAN V+VKK NGK R C+DFTDLNKACPKDSFP
Sbjct: 475  ERAKAVNDEVDKLLKIGSIREVQYPDWLANTVVVKKKNGKDRVCIDFTDLNKACPKDSFP 534

Query: 185  LPRIDQLVDATAGHALLSFMDAYSGYNQIPMYGPDQENTSFITDRGLYCYIGMPFGLINA 364
            LP ID+LV++TAG+ LLSFMDA+SGYNQI M   DQE T FITDRG+YCY  MPFGL NA
Sbjct: 535  LPHIDRLVESTAGNELLSFMDAFSGYNQIMMNPEDQEKTLFITDRGIYCYKVMPFGLRNA 594

Query: 365  GATYQRLVNMMFAKQIGKTMEVYVDDMLVKSKKEEDHVKHLAEMFEILRKYRMKLNPAKC 544
            GATY RLVN MF++ +GKTMEVY+DDML+KS K+EDHVKHL E F IL +Y+MKLNPAKC
Sbjct: 595  GATYPRLVNKMFSEHVGKTMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKLNPAKC 654

Query: 545  VFGVSSGKFLGFMVNNRGIEANPAKIQALQDMQPPRNIKQVQCLTGRIAALNRFVSKSSD 724
             FGV SG+FLG++V  RGIEANP +I A  +M  P+N K+VQ LTGRIAALNRF+S+S+D
Sbjct: 655  TFGVPSGEFLGYIVTKRGIEANPNQINAFLNMPSPKNFKEVQRLTGRIAALNRFISRSTD 714

Query: 725  KCKHFFDVIKGGKKFEWTEACDDAFQRIKQELGSPPLLAKPQDGETL 865
            K   F+ ++KG K+F W E C++AF ++K  L SPP+L KP+  E L
Sbjct: 715  KSLPFYQILKGNKEFLWDEKCEEAFGQLKAYLTSPPVLFKPELDEKL 761


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  392 bits (1006), Expect = e-107
 Identities = 184/287 (64%), Positives = 233/287 (81%)
 Frame = +2

Query: 5    ERAEALKDEVSKLLKAGLIRESFYPTWLANPVLVKKPNGKWRTCVDFTDLNKACPKDSFP 184
            ERA A+ +EV KLLKAG I E  YP WLANPV+VKK NGKWR CVD+TDLNKACPKDS+P
Sbjct: 835  ERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVCVDYTDLNKACPKDSYP 894

Query: 185  LPRIDQLVDATAGHALLSFMDAYSGYNQIPMYGPDQENTSFITDRGLYCYIGMPFGLINA 364
            LP ID+LV+AT+G+ LLSFMDA+SGYNQI M+  DQE TSF+TDRG YCY  M FGL NA
Sbjct: 895  LPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNA 954

Query: 365  GATYQRLVNMMFAKQIGKTMEVYVDDMLVKSKKEEDHVKHLAEMFEILRKYRMKLNPAKC 544
            GATYQR VN M A QIG+T+EVY+DDMLVKS K EDHV+HL++ F++L  Y MKLNP KC
Sbjct: 955  GATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKLNPTKC 1014

Query: 545  VFGVSSGKFLGFMVNNRGIEANPAKIQALQDMQPPRNIKQVQCLTGRIAALNRFVSKSSD 724
             FGV+SG+FLG++V  RGIEANP +I+A+ ++  PRN ++VQ LTGRIAALNRF+S+S+D
Sbjct: 1015 TFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRLTGRIAALNRFISRSTD 1074

Query: 725  KCKHFFDVIKGGKKFEWTEACDDAFQRIKQELGSPPLLAKPQDGETL 865
            KC  F++++K   +F+W +  ++AF+++K  L +PP+L KP+ GETL
Sbjct: 1075 KCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETL 1121


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  387 bits (993), Expect = e-105
 Identities = 190/287 (66%), Positives = 226/287 (78%)
 Frame = +2

Query: 5   ERAEALKDEVSKLLKAGLIRESFYPTWLANPVLVKKPNGKWRTCVDFTDLNKACPKDSFP 184
           ERA+ + DEV KLLK G IRE  YP W+AN V+VKK NGK R C+DFTDLNKACPKDSFP
Sbjct: 32  ERAKIVNDEVDKLLKIGSIREVQYPEWVANTVVVKKKNGKDRVCIDFTDLNKACPKDSFP 91

Query: 185 LPRIDQLVDATAGHALLSFMDAYSGYNQIPMYGPDQENTSFITDRGLYCYIGMPFGLINA 364
           LP ID+LV++TAG+ LL+FMDA+SG NQI M   DQE TSFITDRG+YCY  MPFGL NA
Sbjct: 92  LPHIDRLVESTAGNELLTFMDAFSGSNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNA 151

Query: 365 GATYQRLVNMMFAKQIGKTMEVYVDDMLVKSKKEEDHVKHLAEMFEILRKYRMKLNPAKC 544
           GATYQRLVN MF   +GKTMEVY+DDMLVKS K+EDHVKHL E F IL KY+MKLNPAKC
Sbjct: 152 GATYQRLVNKMFHNHLGKTMEVYIDDMLVKSLKKEDHVKHLEECFGILNKYQMKLNPAKC 211

Query: 545 VFGVSSGKFLGFMVNNRGIEANPAKIQALQDMQPPRNIKQVQCLTGRIAALNRFVSKSSD 724
            FGV SG+FLG++V  RGIEAN  +I A  +M  PRN K+VQ LTGRIAALNRF+S+S+D
Sbjct: 212 TFGVPSGEFLGYIVTERGIEANSNQINAFLNMPSPRNFKEVQRLTGRIAALNRFISRSTD 271

Query: 725 KCKHFFDVIKGGKKFEWTEACDDAFQRIKQELGSPPLLAKPQDGETL 865
           K   F+ ++KG K F W E C++AF ++K  L +PP+L+KP+  E L
Sbjct: 272 KSLPFYQILKGNKGFLWDEKCEEAFGQLKAYLTTPPILSKPEVDEKL 318


>emb|CAH67397.1| H0115B09.9 [Oryza sativa Indica Group]
          Length = 943

 Score =  361 bits (926), Expect = 1e-97
 Identities = 175/287 (60%), Positives = 216/287 (75%)
 Frame = +2

Query: 5   ERAEALKDEVSKLLKAGLIRESFYPTWLANPVLVKKPNGKWRTCVDFTDLNKACPKDSFP 184
           +R +A K E+ KLLKA +IRE  +P WLANPVLVKK NGKWR C+DFTDLNKACPKD FP
Sbjct: 4   DRQQATKVELEKLLKAKVIREVMHPEWLANPVLVKKANGKWRMCIDFTDLNKACPKDDFP 63

Query: 185 LPRIDQLVDATAGHALLSFMDAYSGYNQIPMYGPDQENTSFITDRGLYCYIGMPFGLINA 364
           LPRIDQLVDATA   L+SF+DAYSGY+Q+ M   D+E TSFIT  G YC+I MPFGL NA
Sbjct: 64  LPRIDQLVDATASCELMSFLDAYSGYHQVFMMKEDEEKTSFITPFGTYCFIRMPFGLKNA 123

Query: 365 GATYQRLVNMMFAKQIGKTMEVYVDDMLVKSKKEEDHVKHLAEMFEILRKYRMKLNPAKC 544
           GAT+ RL+  + AKQ+G+ +E YVDD++VKSK+   H K L E FE LRKY +KLNP KC
Sbjct: 124 GATFARLIGKVLAKQLGRNVEAYVDDIVVKSKQAFSHGKDLQETFENLRKYSVKLNPEKC 183

Query: 545 VFGVSSGKFLGFMVNNRGIEANPAKIQALQDMQPPRNIKQVQCLTGRIAALNRFVSKSSD 724
           VFGV +GK LGF+V+ RGIEANP KI A+  MQPP+N +++Q LTGR+A+L+RF+SKS++
Sbjct: 184 VFGVGAGKLLGFLVSKRGIEANPDKIAAIHQMQPPKNTREMQRLTGRMASLSRFLSKSAE 243

Query: 725 KCKHFFDVIKGGKKFEWTEACDDAFQRIKQELGSPPLLAKPQDGETL 865
           K   FF  ++G   FEWT  C  AF  +K  L + P LA PQ G+ L
Sbjct: 244 KGLPFFKTLRGANSFEWTAECQKAFDDLKTYLQNMPTLASPQKGQPL 290


>emb|CAD41263.1| OSJNBb0103I08.2 [Oryza sativa Japonica Group]
           gi|38344987|emb|CAE02793.2| OSJNBa0011L07.17 [Oryza
           sativa Japonica Group]
          Length = 943

 Score =  361 bits (926), Expect = 1e-97
 Identities = 175/287 (60%), Positives = 216/287 (75%)
 Frame = +2

Query: 5   ERAEALKDEVSKLLKAGLIRESFYPTWLANPVLVKKPNGKWRTCVDFTDLNKACPKDSFP 184
           +R +A K E+ KLLKA +IRE  +P WLANPVLVKK NGKWR C+DFTDLNKACPKD FP
Sbjct: 4   DRQQATKVELEKLLKAKVIREVMHPEWLANPVLVKKANGKWRMCIDFTDLNKACPKDDFP 63

Query: 185 LPRIDQLVDATAGHALLSFMDAYSGYNQIPMYGPDQENTSFITDRGLYCYIGMPFGLINA 364
           LPRIDQLVDATA   L+SF+DAYSGY+Q+ M   D+E TSFIT  G YC+I MPFGL NA
Sbjct: 64  LPRIDQLVDATASCELMSFLDAYSGYHQVFMMKEDEEKTSFITPFGTYCFIRMPFGLKNA 123

Query: 365 GATYQRLVNMMFAKQIGKTMEVYVDDMLVKSKKEEDHVKHLAEMFEILRKYRMKLNPAKC 544
           GAT+ RL+  + AKQ+G+ +E YVDD++VKSK+   H K L E FE LRKY +KLNP KC
Sbjct: 124 GATFARLIGKVLAKQLGRNVEAYVDDIVVKSKQAFSHGKDLQETFENLRKYSVKLNPEKC 183

Query: 545 VFGVSSGKFLGFMVNNRGIEANPAKIQALQDMQPPRNIKQVQCLTGRIAALNRFVSKSSD 724
           VFGV +GK LGF+V+ RGIEANP KI A+  MQPP+N +++Q LTGR+A+L+RF+SKS++
Sbjct: 184 VFGVGAGKLLGFLVSKRGIEANPDKIAAIHQMQPPKNTREMQRLTGRMASLSRFLSKSAE 243

Query: 725 KCKHFFDVIKGGKKFEWTEACDDAFQRIKQELGSPPLLAKPQDGETL 865
           K   FF  ++G   FEWT  C  AF  +K  L + P LA PQ G+ L
Sbjct: 244 KGLPFFKTLRGANSFEWTAECQKAFDDLKTYLQNMPTLASPQKGQPL 290