BLASTX nr result

ID: Bupleurum21_contig00022353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022353
         (1287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39148.3| unnamed protein product [Vitis vinifera]               66   2e-08
ref|NP_001063316.2| Os09g0448100 [Oryza sativa Japonica Group] g...    66   2e-08
gb|EAZ44931.1| hypothetical protein OsJ_29572 [Oryza sativa Japo...    66   2e-08
ref|XP_003599499.1| F-box protein [Medicago truncatula] gi|35548...    65   4e-08
ref|XP_003599496.1| F-box [Medicago truncatula] gi|355488544|gb|...    65   5e-08

>emb|CBI39148.3| unnamed protein product [Vitis vinifera]
          Length = 711

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
 Frame = +1

Query: 49  HIPEQIIFNILSCTKVTSLLRFRSVCKSWRTLISNPLFLEAHHTNSDKIPSILMITSSVV 228
           +IPE I+ +ILS   V SLLRFR VCK+W TLIS+P F+E H     K P I ++    V
Sbjct: 3   YIPEVIMVDILSRLPVKSLLRFRCVCKAWCTLISHPQFVETHLRQQHKRPVIGLVVPHSV 62

Query: 229 DNKLSGTVLYSNSPEYSVSLNL---MPPFNNMEYVSSCNGIILCV 354
           D+ L       +  + +V L L   +P       + SCNG +LCV
Sbjct: 63  DDPL-------HKDDLAVDLELHLGIPNKRTTTVLDSCNG-LLCV 99


>ref|NP_001063316.2| Os09g0448100 [Oryza sativa Japonica Group]
           gi|255678938|dbj|BAF25230.2| Os09g0448100, partial
           [Oryza sativa Japonica Group]
          Length = 432

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = +1

Query: 46  HHIPEQIIFNILSCTKVTSLLRFRSVCKSWRTLISNPLFLEAHHTNSDKIPSILMI 213
           H+IP+ ++FNILS     SL+RF+SVCK+W  +IS+P F +AH   S + PSILM+
Sbjct: 66  HYIPDDVMFNILSWLPSKSLIRFKSVCKAWHAMISSPCFTDAHLECSKRNPSILMV 121


>gb|EAZ44931.1| hypothetical protein OsJ_29572 [Oryza sativa Japonica Group]
           gi|215687326|dbj|BAG91874.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215697871|dbj|BAG92064.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 380

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = +1

Query: 46  HHIPEQIIFNILSCTKVTSLLRFRSVCKSWRTLISNPLFLEAHHTNSDKIPSILMI 213
           H+IP+ ++FNILS     SL+RF+SVCK+W  +IS+P F +AH   S + PSILM+
Sbjct: 14  HYIPDDVMFNILSWLPSKSLIRFKSVCKAWHAMISSPCFTDAHLECSKRNPSILMV 69


>ref|XP_003599499.1| F-box protein [Medicago truncatula] gi|355488547|gb|AES69750.1|
           F-box protein [Medicago truncatula]
          Length = 489

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
 Frame = +1

Query: 49  HIPEQIIFNILSCTKVTSLLRFRSVCKSWRTLISNPLFLEAH-------HTNSDKIPSIL 207
           ++P ++I  I+    V SL+RF+ VCKSW  LIS+  F ++H       HTN     S L
Sbjct: 122 YLPHELIIQIMLRLPVKSLIRFKCVCKSWLALISDHNFAKSHFELSPATHTNRIVFMSTL 181

Query: 208 MITSSVVDNKLSGTVLYSNSPEYSVSLNLMPP--FNNMEYVSSCNGIILCVC 357
            + +  +D + S   L  +S   S++LN M P  ++N+E  SSC G I+  C
Sbjct: 182 ALETRSIDFEAS---LNDDSASTSLNLNFMLPESYSNLEIKSSCRGFIVLTC 230


>ref|XP_003599496.1| F-box [Medicago truncatula] gi|355488544|gb|AES69747.1| F-box
           [Medicago truncatula]
          Length = 370

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 9/114 (7%)
 Frame = +1

Query: 34  TNSGHHIPEQIIFNILSCTKVTSLLRFRSVCKSWRTLISNPLFLEAH-------HTNSDK 192
           T +G ++P ++I  IL    V SL+RF+ VCKSW TLIS+P F ++H       HTN   
Sbjct: 3   TKTGLYLPHELIIQILLRLPVKSLIRFKCVCKSWLTLISDPHFAKSHFDLSTRTHTNRIV 62

Query: 193 IPSILMITSSVVDNKLSGTVLYSNSPEYSVSLNLMPP--FNNMEYVSSCNGIIL 348
             S   +    +D + S   L  +S   S++ N + P  ++N+E  SSC G I+
Sbjct: 63  FMSTPALEIRSIDFEAS---LNDDSASTSLNFNFILPESYSNLEIKSSCRGFIV 113


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