BLASTX nr result
ID: Bupleurum21_contig00022348
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00022348 (1787 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 477 0.0 sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 473 0.0 emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 471 0.0 emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 474 0.0 sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 474 0.0 >ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis vinifera] Length = 978 Score = 477 bits (1228), Expect(2) = 0.0 Identities = 225/282 (79%), Positives = 247/282 (87%), Gaps = 2/282 (0%) Frame = +2 Query: 947 PDIRPAFVHSLKTV--DTRKGSRRYGVIECDPMVRKGLEKTARHMVIPYMPMLVPPINWT 1120 PDIRPAFVH+LKTV +T+KG+RRYGVIECDP+VRKGLEKTARHMVIPYMPMLVPP+NWT Sbjct: 358 PDIRPAFVHTLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWT 417 Query: 1121 GYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQIEPIFEALNTLGNTKWRVNKRILGIV 1300 GYDKGAYLFLPSY+MR HGA+QQREA+KR P+K +EP FEALNTLGNTKWR+NKR+LG++ Sbjct: 418 GYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVI 477 Query: 1301 DRIWASGGRLADLVDREDVXXXXXXXXXXXXXXXXXXXXXXXXXXXNSERHSQRCDIELK 1480 DRIWASGGRLADLVDREDV NSERHSQRCDIELK Sbjct: 478 DRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELK 537 Query: 1481 LAVSRKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWL 1660 LAV+RKMKDEDGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWL Sbjct: 538 LAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWL 597 Query: 1661 KIHLANLFAGGVDKFSYEGRVAFTEKHLDDIFDSADRPLDGK 1786 KIHLAN++AGGVDK SYEGRVAFTE HL+DIFDSADRPL+G+ Sbjct: 598 KIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGR 639 Score = 356 bits (914), Expect(2) = 0.0 Identities = 178/274 (64%), Positives = 217/274 (79%), Gaps = 2/274 (0%) Frame = +1 Query: 55 FKYAGHFRGFASAAEAIVSTEDES--DEVQELINQMERESKVQKQPKFVGDISQGKYFIL 228 F G+ +G+ASAAEAI S ED S DEVQEL+ ++ + K++KQPK +G ++QGK+ +L Sbjct: 84 FGLFGYQKGYASAAEAIASEEDMSGVDEVQELVEEVNKGDKLEKQPKLIGGVAQGKHNVL 143 Query: 229 RRRQIKMETEAWQEAAKEYQELVDDMCEQKLAPNLPYMKSLFLGWFEPLRNAIAVDQETC 408 RRRQIKMETEAW+EAAKEY+EL+ DMCEQKLAPNLPY+KSLFLGWFEPLR+ IA +Q+ C Sbjct: 144 RRRQIKMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLC 203 Query: 409 VEGKHRTAYGPYFDQLPANMMAVITMHKLLGVLMTGLGSNSGCRVVSAACQIGEAIEHEV 588 +GK+R AY PYFD LPA+MMAVITMHKL+G+LMTG G N RVV AAC IGEAIEHEV Sbjct: 204 KQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMTGEG-NGSARVVQAACHIGEAIEHEV 262 Query: 589 RIQNFLDXXXXXXXXXXDFSNGTDAPTEQQEKLRKKVTNLMKKQKLHQVRSIVKEHDETK 768 RIQ F++ + G++ T++QEKLRKKV+ LMKKQKL QVR IVK D++K Sbjct: 263 RIQRFMEKTKKKSASSNNPDGGSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSK 322 Query: 769 PWGQEAQVKVGSRLIQLLMETAYIQSPADHSEDG 870 PWGQ+A VKVGSRLI+LL+ETAYIQ PAD DG Sbjct: 323 PWGQDANVKVGSRLIELLIETAYIQPPADQLGDG 356 >sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName: Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 1B; Flags: Precursor Length = 1002 Score = 473 bits (1217), Expect(2) = 0.0 Identities = 224/280 (80%), Positives = 244/280 (87%) Frame = +2 Query: 947 PDIRPAFVHSLKTVDTRKGSRRYGVIECDPMVRKGLEKTARHMVIPYMPMLVPPINWTGY 1126 PDIRPAFVH+LKTV+T KGSRRYGVI+CDP+VRKGL+KTARHMVIPYMPMLVPP +W GY Sbjct: 384 PDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGY 443 Query: 1127 DKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQIEPIFEALNTLGNTKWRVNKRILGIVDR 1306 DKG YLFLPSYIMRTHGAKQQREAVKRVPKKQ+EP+F+AL+TLGNTKWRVN+++LGIVDR Sbjct: 444 DKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVDR 503 Query: 1307 IWASGGRLADLVDREDVXXXXXXXXXXXXXXXXXXXXXXXXXXXNSERHSQRCDIELKLA 1486 IWASGGRLADLVDREDV N ERHSQRCDIELKLA Sbjct: 504 IWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLA 563 Query: 1487 VSRKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI 1666 V+RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKI Sbjct: 564 VARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKI 623 Query: 1667 HLANLFAGGVDKFSYEGRVAFTEKHLDDIFDSADRPLDGK 1786 HLAN++ GGVDK SYEGRVAF+E HL+DIFDSA+RPL+GK Sbjct: 624 HLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPLEGK 663 Score = 330 bits (845), Expect(2) = 0.0 Identities = 173/275 (62%), Positives = 204/275 (74%), Gaps = 7/275 (2%) Frame = +1 Query: 67 GHFRGFASAAEAIVSTEDES-DEVQELINQMERESKV------QKQPKFVGDISQGKYFI 225 G R + SAAEAIVST +E DE+QELI +M++E++ KQPK +G + GKY Sbjct: 109 GRLRSYGSAAEAIVSTSEEDIDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNF 168 Query: 226 LRRRQIKMETEAWQEAAKEYQELVDDMCEQKLAPNLPYMKSLFLGWFEPLRNAIAVDQET 405 LRRRQIK+ETEAW+EAAKEYQEL+ DMCEQKLAPNLPYMKSLFLGWFEPLR+AIA +Q+ Sbjct: 169 LRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKL 228 Query: 406 CVEGKHRTAYGPYFDQLPANMMAVITMHKLLGVLMTGLGSNSGCRVVSAACQIGEAIEHE 585 C EGK+R AY P+FDQLPA MMAVITMHKL+G+LMTG G+ S RVV AA IGEAIEHE Sbjct: 229 CDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGS-ARVVQAASYIGEAIEHE 287 Query: 586 VRIQNFLDXXXXXXXXXXDFSNGTDAPTEQQEKLRKKVTNLMKKQKLHQVRSIVKEHDET 765 RI FL+ D +++E+LRKKV LMKKQKL QVR IVK+ D+ Sbjct: 288 ARIHRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDE 347 Query: 766 KPWGQEAQVKVGSRLIQLLMETAYIQSPADHSEDG 870 KPWGQ+ VKVG RLIQ+LMETAYIQ P D +DG Sbjct: 348 KPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDG 382 >emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] Length = 1002 Score = 471 bits (1212), Expect(2) = 0.0 Identities = 223/280 (79%), Positives = 244/280 (87%) Frame = +2 Query: 947 PDIRPAFVHSLKTVDTRKGSRRYGVIECDPMVRKGLEKTARHMVIPYMPMLVPPINWTGY 1126 PDIRPAFVH+LKTV+T KGSRRYGVI+CDP+VRKGL+KTARHMVIPYMPMLVPP +W GY Sbjct: 384 PDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGY 443 Query: 1127 DKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQIEPIFEALNTLGNTKWRVNKRILGIVDR 1306 DKG YLFLPSYIMRTHGAKQQREAVKRVPKKQ+EP+F+AL+TLGNTKWRVN+++LGIV+R Sbjct: 444 DKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNRKVLGIVNR 503 Query: 1307 IWASGGRLADLVDREDVXXXXXXXXXXXXXXXXXXXXXXXXXXXNSERHSQRCDIELKLA 1486 IWASGGRLADLVDREDV N ERHSQRCDIELKLA Sbjct: 504 IWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQRCDIELKLA 563 Query: 1487 VSRKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI 1666 V+RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKI Sbjct: 564 VARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKI 623 Query: 1667 HLANLFAGGVDKFSYEGRVAFTEKHLDDIFDSADRPLDGK 1786 HLAN++ GGVDK SYEGRVAF+E HL+DIFDSA+RPL+GK Sbjct: 624 HLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPLEGK 663 Score = 330 bits (845), Expect(2) = 0.0 Identities = 173/275 (62%), Positives = 204/275 (74%), Gaps = 7/275 (2%) Frame = +1 Query: 67 GHFRGFASAAEAIVSTEDES-DEVQELINQMERESKV------QKQPKFVGDISQGKYFI 225 G R + SAAEAIVST +E DE+QELI +M++E++ KQPK +G + GKY Sbjct: 109 GRLRSYGSAAEAIVSTSEEDIDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNF 168 Query: 226 LRRRQIKMETEAWQEAAKEYQELVDDMCEQKLAPNLPYMKSLFLGWFEPLRNAIAVDQET 405 LRRRQIK+ETEAW+EAAKEYQEL+ DMCEQKLAPNLPYMKSLFLGWFEPLR+AIA +Q+ Sbjct: 169 LRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKL 228 Query: 406 CVEGKHRTAYGPYFDQLPANMMAVITMHKLLGVLMTGLGSNSGCRVVSAACQIGEAIEHE 585 C EGK+R AY P+FDQLPA MMAVITMHKL+G+LMTG G+ S RVV AA IGEAIEHE Sbjct: 229 CDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGS-ARVVQAASYIGEAIEHE 287 Query: 586 VRIQNFLDXXXXXXXXXXDFSNGTDAPTEQQEKLRKKVTNLMKKQKLHQVRSIVKEHDET 765 RI FL+ D +++E+LRKKV LMKKQKL QVR IVK+ D+ Sbjct: 288 ARIHRFLEKTKKSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDE 347 Query: 766 KPWGQEAQVKVGSRLIQLLMETAYIQSPADHSEDG 870 KPWGQ+ VKVG RLIQ+LMETAYIQ P D +DG Sbjct: 348 KPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDG 382 >emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] Length = 1002 Score = 474 bits (1221), Expect(2) = 0.0 Identities = 224/280 (80%), Positives = 246/280 (87%) Frame = +2 Query: 947 PDIRPAFVHSLKTVDTRKGSRRYGVIECDPMVRKGLEKTARHMVIPYMPMLVPPINWTGY 1126 PDIRPAFVH+LKTV+T KGSRRYGVI+CDP+VRKGL+KTARHMVIPYMPMLVPP +W GY Sbjct: 384 PDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGY 443 Query: 1127 DKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQIEPIFEALNTLGNTKWRVNKRILGIVDR 1306 DKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQ+EP+F+AL+TLGNTKWR+N+++LGIVDR Sbjct: 444 DKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDR 503 Query: 1307 IWASGGRLADLVDREDVXXXXXXXXXXXXXXXXXXXXXXXXXXXNSERHSQRCDIELKLA 1486 IWASGGRLADLVDREDV N ERHSQRCDIELKLA Sbjct: 504 IWASGGRLADLVDREDVPLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLA 563 Query: 1487 VSRKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI 1666 V+RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI Sbjct: 564 VARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI 623 Query: 1667 HLANLFAGGVDKFSYEGRVAFTEKHLDDIFDSADRPLDGK 1786 HLAN++ GGVDK SYEGRVAF+E H++DIFDSA+RPL+GK Sbjct: 624 HLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAERPLEGK 663 Score = 326 bits (835), Expect(2) = 0.0 Identities = 171/274 (62%), Positives = 203/274 (74%), Gaps = 7/274 (2%) Frame = +1 Query: 67 GHFRGFASAAEAIVSTEDES-DEVQELINQMERESKV------QKQPKFVGDISQGKYFI 225 G R + SAAEAI ST +E DE+QELI +M +E++ KQPK +G + GKY + Sbjct: 109 GFLRSYGSAAEAIASTSEEDIDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNL 168 Query: 226 LRRRQIKMETEAWQEAAKEYQELVDDMCEQKLAPNLPYMKSLFLGWFEPLRNAIAVDQET 405 LRRRQIK+ETEAW+EAAKEYQEL+ DMCEQKLAPNLPYMKSLFLGWFEPLR+AIA +Q+ Sbjct: 169 LRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKL 228 Query: 406 CVEGKHRTAYGPYFDQLPANMMAVITMHKLLGVLMTGLGSNSGCRVVSAACQIGEAIEHE 585 C EGK+R AY P+FDQLPA MMAVITMHKL+G+LMTG G+ S RVV AA IGEAIEHE Sbjct: 229 CDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGS-ARVVQAASHIGEAIEHE 287 Query: 586 VRIQNFLDXXXXXXXXXXDFSNGTDAPTEQQEKLRKKVTNLMKKQKLHQVRSIVKEHDET 765 RI FL+ D + +++E+LRKKV LMKKQKL QVR IVK+ D+ Sbjct: 288 ARIHRFLEKTKKSNALSGDLEDTPGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDE 347 Query: 766 KPWGQEAQVKVGSRLIQLLMETAYIQSPADHSED 867 KPWGQ+ VKVG RLIQ+LMETAYIQ P D +D Sbjct: 348 KPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDD 381 >sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName: Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 1; Flags: Precursor gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] Length = 1002 Score = 474 bits (1221), Expect(2) = 0.0 Identities = 224/280 (80%), Positives = 246/280 (87%) Frame = +2 Query: 947 PDIRPAFVHSLKTVDTRKGSRRYGVIECDPMVRKGLEKTARHMVIPYMPMLVPPINWTGY 1126 PDIRPAFVH+LKTV+T KGSRRYGVI+CDP+VRKGL+KTARHMVIPYMPMLVPP +W GY Sbjct: 384 PDIRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGY 443 Query: 1127 DKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQIEPIFEALNTLGNTKWRVNKRILGIVDR 1306 DKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQ+EP+F+AL+TLGNTKWR+N+++LGIVDR Sbjct: 444 DKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNRKVLGIVDR 503 Query: 1307 IWASGGRLADLVDREDVXXXXXXXXXXXXXXXXXXXXXXXXXXXNSERHSQRCDIELKLA 1486 IWASGGRLADLVDREDV N ERHSQRCDIELKLA Sbjct: 504 IWASGGRLADLVDREDVPLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQRCDIELKLA 563 Query: 1487 VSRKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI 1666 V+RKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI Sbjct: 564 VARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKI 623 Query: 1667 HLANLFAGGVDKFSYEGRVAFTEKHLDDIFDSADRPLDGK 1786 HLAN++ GGVDK SYEGRVAF+E H++DIFDSA+RPL+GK Sbjct: 624 HLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAERPLEGK 663 Score = 325 bits (832), Expect(2) = 0.0 Identities = 170/274 (62%), Positives = 203/274 (74%), Gaps = 7/274 (2%) Frame = +1 Query: 67 GHFRGFASAAEAIVSTEDES-DEVQELINQMERESKV------QKQPKFVGDISQGKYFI 225 G R + SAAEAI ST +E DE+QELI +M +E++ KQPK +G + GKY + Sbjct: 109 GFLRSYGSAAEAIASTSEEDIDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGVGKYNL 168 Query: 226 LRRRQIKMETEAWQEAAKEYQELVDDMCEQKLAPNLPYMKSLFLGWFEPLRNAIAVDQET 405 LRRRQIK+ETEAW+EAAKEYQEL+ DMCEQKLAPNLPYMKSLFLGWFEPLR+AIA +Q+ Sbjct: 169 LRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKL 228 Query: 406 CVEGKHRTAYGPYFDQLPANMMAVITMHKLLGVLMTGLGSNSGCRVVSAACQIGEAIEHE 585 C EGK+R AY P+FDQLPA MMAVITMHKL+G+LMTG G+ S RVV AA IGEAIEHE Sbjct: 229 CDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGS-ARVVQAASHIGEAIEHE 287 Query: 586 VRIQNFLDXXXXXXXXXXDFSNGTDAPTEQQEKLRKKVTNLMKKQKLHQVRSIVKEHDET 765 RI FL+ D + +++E++RKKV LMKKQKL QVR IVK+ D+ Sbjct: 288 ARIHRFLEKTKKSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDE 347 Query: 766 KPWGQEAQVKVGSRLIQLLMETAYIQSPADHSED 867 KPWGQ+ VKVG RLIQ+LMETAYIQ P D +D Sbjct: 348 KPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDD 381