BLASTX nr result

ID: Bupleurum21_contig00022344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022344
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300805.1| predicted protein [Populus trichocarpa] gi|2...   120   4e-36
ref|XP_002520977.1| NADH-ubiquinone oxidoreductase 24 kD subunit...   118   5e-36
ref|XP_002307624.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-35
ref|XP_004152180.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...   117   9e-35
ref|XP_002281655.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...   115   2e-34

>ref|XP_002300805.1| predicted protein [Populus trichocarpa] gi|222842531|gb|EEE80078.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  120 bits (300), Expect(2) = 4e-36
 Identities = 63/79 (79%), Positives = 64/79 (81%)
 Frame = +1

Query: 91  NKEKVNEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVCEHLTQ*FWSAKVAKG 270
           NKEKV EI+SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNA             VAK 
Sbjct: 52  NKEKVKEIISHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNA-------------VAKV 98

Query: 271 IEVAPIRVYEVATFYSMFN 327
           IEVAPIRVYEVATFYSMFN
Sbjct: 99  IEVAPIRVYEVATFYSMFN 117



 Score = 56.6 bits (135), Expect(2) = 4e-36
 Identities = 23/34 (67%), Positives = 29/34 (85%)
 Frame = +2

Query: 2   QTSRSFSTALNYHIDTPENNTELPWEFSPKTKKR 103
           Q SRSFSTALNYH++TPENN +LPWEF+   K++
Sbjct: 22  QASRSFSTALNYHLNTPENNPDLPWEFTAANKEK 55


>ref|XP_002520977.1| NADH-ubiquinone oxidoreductase 24 kD subunit, putative [Ricinus
           communis] gi|223539814|gb|EEF41394.1| NADH-ubiquinone
           oxidoreductase 24 kD subunit, putative [Ricinus
           communis]
          Length = 255

 Score =  118 bits (295), Expect(2) = 5e-36
 Identities = 62/79 (78%), Positives = 64/79 (81%)
 Frame = +1

Query: 91  NKEKVNEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVCEHLTQ*FWSAKVAKG 270
           NKEKV EI+SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAM+A             VAK 
Sbjct: 53  NKEKVKEIISHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMDA-------------VAKV 99

Query: 271 IEVAPIRVYEVATFYSMFN 327
           IEVAPIRVYEVATFYSMFN
Sbjct: 100 IEVAPIRVYEVATFYSMFN 118



 Score = 58.2 bits (139), Expect(2) = 5e-36
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = +2

Query: 2   QTSRSFSTALNYHIDTPENNTELPWEFSPKTKKR 103
           Q SRSFSTALNYHID+P+NN  +PWEFS K K++
Sbjct: 23  QISRSFSTALNYHIDSPDNNPNIPWEFSEKNKEK 56


>ref|XP_002307624.1| predicted protein [Populus trichocarpa] gi|222857073|gb|EEE94620.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  119 bits (299), Expect(2) = 2e-35
 Identities = 63/79 (79%), Positives = 64/79 (81%)
 Frame = +1

Query: 91  NKEKVNEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVCEHLTQ*FWSAKVAKG 270
           NKEKV EI+SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNA             VAK 
Sbjct: 52  NKEKVKEIVSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNA-------------VAKV 98

Query: 271 IEVAPIRVYEVATFYSMFN 327
           IEVAPIRVYEVATFYSMFN
Sbjct: 99  IEVAPIRVYEVATFYSMFN 117



 Score = 54.3 bits (129), Expect(2) = 2e-35
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 2   QTSRSFSTALNYHIDTPENNTELPWEFSPKTKKR 103
           Q SRS STALNYHIDT +NN +LPWEFS   K++
Sbjct: 22  QASRSLSTALNYHIDTADNNPDLPWEFSASNKEK 55


>ref|XP_004152180.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2,
           mitochondrial-like [Cucumis sativus]
          Length = 251

 Score =  117 bits (294), Expect(2) = 9e-35
 Identities = 61/79 (77%), Positives = 64/79 (81%)
 Frame = +1

Query: 91  NKEKVNEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVCEHLTQ*FWSAKVAKG 270
           NK+K+ EILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNA             VAK 
Sbjct: 49  NKKKIAEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNA-------------VAKV 95

Query: 271 IEVAPIRVYEVATFYSMFN 327
           +EVAPIRVYEVATFYSMFN
Sbjct: 96  VEVAPIRVYEVATFYSMFN 114



 Score = 54.3 bits (129), Expect(2) = 9e-35
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = +2

Query: 2   QTSRSFSTALNYHIDTPENNTELPWEFSPKTKKR 103
           QTSR FSTA NYH+D+P+NN +L WEFS   KK+
Sbjct: 19  QTSRCFSTAFNYHVDSPDNNPDLTWEFSETNKKK 52


>ref|XP_002281655.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2,
           mitochondrial [Vitis vinifera]
           gi|297735489|emb|CBI17929.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  115 bits (289), Expect(2) = 2e-34
 Identities = 61/79 (77%), Positives = 63/79 (79%)
 Frame = +1

Query: 91  NKEKVNEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVCEHLTQ*FWSAKVAKG 270
           NK KV EILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAM+A             VAK 
Sbjct: 52  NKGKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMDA-------------VAKV 98

Query: 271 IEVAPIRVYEVATFYSMFN 327
           +EVAPIRVYEVATFYSMFN
Sbjct: 99  VEVAPIRVYEVATFYSMFN 117



 Score = 55.1 bits (131), Expect(2) = 2e-34
 Identities = 22/32 (68%), Positives = 27/32 (84%)
 Frame = +2

Query: 2   QTSRSFSTALNYHIDTPENNTELPWEFSPKTK 97
           QTSRSFSTALNYH+D+P+NN  +PWEF+   K
Sbjct: 22  QTSRSFSTALNYHLDSPDNNPNIPWEFNDANK 53


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