BLASTX nr result

ID: Bupleurum21_contig00022323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022323
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522365.1| conserved hypothetical protein [Ricinus comm...    91   7e-17
ref|XP_002442426.1| hypothetical protein SORBIDRAFT_08g019887 [S...    69   4e-10
ref|XP_002867286.1| hypothetical protein ARALYDRAFT_913300 [Arab...    65   6e-09
ref|XP_002515369.1| DNA binding protein, putative [Ricinus commu...    64   1e-08
emb|CAA19755.1| putative protein [Arabidopsis thaliana] gi|72700...    62   4e-08

>ref|XP_002522365.1| conserved hypothetical protein [Ricinus communis]
           gi|223538443|gb|EEF40049.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 306

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 35/196 (17%)
 Frame = -1

Query: 484 NGWPLFVRDHKLELGDFIVFSLVDHSVFEVTVFETSMCEKHI-----CDHPD-----AIK 335
           +GW  FV+DH LE+GDF+VF+LV+ + FEV ++  + C K I      DH D       K
Sbjct: 73  HGWKKFVKDHNLEVGDFLVFNLVNDTTFEVLIYGPTCCLKKIKLADDDDHVDQNKNSTSK 132

Query: 334 VEETGSDSE---YAKEPSP----------------KKTKRPNVL----HIDREDSEDGPE 224
              T S S+   + K   P                KK KRP +      +++++S    E
Sbjct: 133 FTSTASGSKQISFKKRACPKLSQFKRPRGSAKKTGKKAKRPRIFKGKTEVNKKESIAEEE 192

Query: 223 EELSSFKIIINEVYKTNLPVPSWFATKGGLANKEEIKLSGPKGKEYVATIS--QGTDVEL 50
            +    K+++ E  K N+ VP  FA K GL NK +  +  P G+++   ++   G  V L
Sbjct: 193 TKHPCVKLVLKEYQKYNVVVPRRFADKIGLQNKRKTVIEDPLGRQWPVFVNLVGGNQVHL 252

Query: 49  TRGWTALCAANRLKKG 2
           + GW+A   ANRL  G
Sbjct: 253 STGWSAFYQANRLVTG 268


>ref|XP_002442426.1| hypothetical protein SORBIDRAFT_08g019887 [Sorghum bicolor]
           gi|241943119|gb|EES16264.1| hypothetical protein
           SORBIDRAFT_08g019887 [Sorghum bicolor]
          Length = 592

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
 Frame = -1

Query: 481 GWPLFVRDHKLELGDFIVFSLVDHSVFEVTVFETSMCEKHI-CDHPDAIK-VEE--TGSD 314
           GW  F   ++LE GD +VF     S FEV +F  S CEK + C   ++I  V+E  T  D
Sbjct: 44  GWVAFANAYELEQGDTLVFRYSGESHFEVQIFSPSTCEKELSCFLTNSIPCVQERITSHD 103

Query: 313 SEYAKEPSPKKTKRPNVLH--IDREDSEDGPEEELSSFKIIIN-EVYKTNLPVPSWFATK 143
           +      S ++ K   V    I         +++    KI+I+   +K  L +P  FAT 
Sbjct: 104 NHLQSPGSERRNKACTVCKNCISNHYWHHMSDQDRCFIKIMISASDFKNKLTIPKKFATN 163

Query: 142 GGLANKEEIKLSGPKGKEY-VATISQGTDVELTRGWTALCAANRLKKG 2
            G    EE++L  P GK Y V    +  D+ +  GWT   +++ L++G
Sbjct: 164 VGGQIPEEVQLEAPNGKTYNVKVAKEQNDLVIGTGWTKFSSSHDLRQG 211


>ref|XP_002867286.1| hypothetical protein ARALYDRAFT_913300 [Arabidopsis lyrata subsp.
           lyrata] gi|297313122|gb|EFH43545.1| hypothetical protein
           ARALYDRAFT_913300 [Arabidopsis lyrata subsp. lyrata]
          Length = 632

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 3/163 (1%)
 Frame = -1

Query: 481 GWPLFVRDHKLELGDFIVFSLVDHSVFEVTVFETSMCEKHICDHPDAIKVEETGSDSEYA 302
           GW  FV+ H L + DF+VF      +F VT    S CE      P   + +E  +++E +
Sbjct: 69  GWKEFVKAHDLRVSDFVVFRHEGEMLFNVTALGPSCCEIQYA-QPRRHEEDEESNETEIS 127

Query: 301 KEPSPKKTKRPNVLHIDREDSEDGPEEELSSFKIIINEVYKTNLPVPSWFATKGGL-ANK 125
              S K+ +     ++  E  +  P     S  +  + + +  +  P  FA + GL   +
Sbjct: 128 LR-SEKEVEE----NVKTESDQSSPNLNCFSRSVTASNLSRDTVGFPINFAKQNGLNKER 182

Query: 124 EEIKLSGPKGKEYVATISQGTDVELT--RGWTALCAANRLKKG 2
           +EI L   +GK + + + +  D  L+  RGWT+ C AN+L+ G
Sbjct: 183 QEIFLMNGEGKTWESELKRWGDCRLSIVRGWTSFCTANKLEVG 225


>ref|XP_002515369.1| DNA binding protein, putative [Ricinus communis]
           gi|223545313|gb|EEF46818.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 368

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 17/178 (9%)
 Frame = -1

Query: 484 NGWPLFVRDHKLELGDFIVFSLVDHSVFEVTVFETSMCEKHICDHPDAIKVEETGSDSEY 305
           +GW  F + H L +GDF+VF      VF V VF+ S CE+         ++E +  + E 
Sbjct: 59  DGWKDFAKYHDLHIGDFLVFRHEGDMVFYVMVFDPSACEREYTSFNVKEEMETSEEEKEP 118

Query: 304 AKEPSPKKTKRPNVLHIDREDSEDGPEEELSSFKIIINE------------VYKTNLPVP 161
           AK    +K  +   + I  E   + P  E   F + +              +Y     +P
Sbjct: 119 AKTSDLRKFTKNKQIMISVEGKGNPPVFENPHFAVNMTSYTASHPRKPLKFIYLFKQNIP 178

Query: 160 SWFATKGGLANKE-EIKLSGPKGKEYVATI----SQGTDVELTRGWTALCAANRLKKG 2
             FA   GL N+  +I L   + + ++A +    + GT V +  GW+  C AN LKKG
Sbjct: 179 KKFAEANGLYNRYCKIVLVDQESRSWLADLGYKKADGT-VYVKDGWSTFCIANDLKKG 235


>emb|CAA19755.1| putative protein [Arabidopsis thaliana] gi|7270071|emb|CAB79886.1|
           putative protein [Arabidopsis thaliana]
          Length = 478

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 4/164 (2%)
 Frame = -1

Query: 481 GWPLFVRDHKLELGDFIVFSLVDHSVFEVTVFETSMCEKHICDHPDAIKVEETGSDSEYA 302
           GW  FV  H L + DF+VF      VF VT    S CE     +P +I  EE     E  
Sbjct: 78  GWKEFVEAHDLRIRDFVVFRHEGDMVFHVTALGPSCCE---IQYPQSISHEEGEESGEVG 134

Query: 301 K-EPSPKKTKRPNVLHIDREDSEDGPEEELSSFKIIINEVYKTNLPVPSWFATKGGL-AN 128
             E S K ++R    ++ +E  +   +    S  +  + +    + +P  FA + GL   
Sbjct: 135 MIESSFKISEREVEENLQKEYDQSSADLNCFSQSVTHSNISNDLVTLPRDFAKRNGLDKG 194

Query: 127 KEEIKLSGPKGKEYVATI--SQGTDVELTRGWTALCAANRLKKG 2
             EI L   +GK + + +       V +  GW +LC+ N+LK G
Sbjct: 195 MHEIVLMNEEGKSWESEVRSRMSGQVFIVGGWKSLCSENKLKGG 238


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