BLASTX nr result

ID: Bupleurum21_contig00022315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022315
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK83582.1| serine hydroxymethyltransferase [Glycine max] gi|...   262   2e-68
ref|NP_001238321.1| serine hydroxymethyltransferase 2 [Glycine m...   262   2e-68
gb|AFK38751.1| unknown [Medicago truncatula]                          260   9e-68
ref|XP_003629601.1| Serine hydroxymethyltransferase [Medicago tr...   260   9e-68
gb|ACU21329.1| unknown [Glycine max]                                  260   9e-68

>gb|AFK83582.1| serine hydroxymethyltransferase [Glycine max]
           gi|389548698|gb|AFK83587.1| serine
           hydroxymethyltransferase [Glycine max]
          Length = 471

 Score =  262 bits (669), Expect = 2e-68
 Identities = 126/137 (91%), Positives = 132/137 (96%)
 Frame = +3

Query: 6   KKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVGLKQAASPGFKAYAKQVRANAV 185
           KKGQPE AVYDFEDKINFAVFP+LQGGPHNHQIGALAV LKQAASPGFKAYAKQV+ANAV
Sbjct: 264 KKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAASPGFKAYAKQVKANAV 323

Query: 186 AVGKYLMSKDYTIVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL 365
           A+GKYLM K Y++VTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL
Sbjct: 324 ALGKYLMGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL 383

Query: 366 SPGGVRIGTPAMTSRGL 416
           +PGGVRIG PAMTSRGL
Sbjct: 384 APGGVRIGAPAMTSRGL 400


>ref|NP_001238321.1| serine hydroxymethyltransferase 2 [Glycine max]
           gi|222142531|gb|ACM45952.1| serine
           hydroxymethyltransferase 2 [Glycine max]
          Length = 496

 Score =  262 bits (669), Expect = 2e-68
 Identities = 126/137 (91%), Positives = 132/137 (96%)
 Frame = +3

Query: 6   KKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVGLKQAASPGFKAYAKQVRANAV 185
           KKGQPE AVYDFEDKINFAVFP+LQGGPHNHQIGALAV LKQAASPGFKAYAKQV+ANAV
Sbjct: 289 KKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAASPGFKAYAKQVKANAV 348

Query: 186 AVGKYLMSKDYTIVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL 365
           A+GKYLM K Y++VTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL
Sbjct: 349 ALGKYLMGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL 408

Query: 366 SPGGVRIGTPAMTSRGL 416
           +PGGVRIG PAMTSRGL
Sbjct: 409 APGGVRIGAPAMTSRGL 425


>gb|AFK38751.1| unknown [Medicago truncatula]
          Length = 490

 Score =  260 bits (664), Expect = 9e-68
 Identities = 124/137 (90%), Positives = 131/137 (95%)
 Frame = +3

Query: 6   KKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVGLKQAASPGFKAYAKQVRANAV 185
           KKGQPE AVYDFEDKINFAVFP+LQGGPHNHQIGALAV LKQA SPGFKAYAKQV+ANAV
Sbjct: 264 KKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAMSPGFKAYAKQVKANAV 323

Query: 186 AVGKYLMSKDYTIVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL 365
           A+G YLMSK Y++VTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL
Sbjct: 324 AIGNYLMSKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL 383

Query: 366 SPGGVRIGTPAMTSRGL 416
           +PGGVR+G PAMTSRGL
Sbjct: 384 APGGVRVGAPAMTSRGL 400


>ref|XP_003629601.1| Serine hydroxymethyltransferase [Medicago truncatula]
           gi|357518703|ref|XP_003629640.1| Serine
           hydroxymethyltransferase [Medicago truncatula]
           gi|355523623|gb|AET04077.1| Serine
           hydroxymethyltransferase [Medicago truncatula]
           gi|355523662|gb|AET04116.1| Serine
           hydroxymethyltransferase [Medicago truncatula]
           gi|388495742|gb|AFK35937.1| unknown [Medicago
           truncatula]
          Length = 471

 Score =  260 bits (664), Expect = 9e-68
 Identities = 124/137 (90%), Positives = 131/137 (95%)
 Frame = +3

Query: 6   KKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVGLKQAASPGFKAYAKQVRANAV 185
           KKGQPE AVYDFEDKINFAVFP+LQGGPHNHQIGALAV LKQA SPGFKAYAKQV+ANAV
Sbjct: 264 KKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAMSPGFKAYAKQVKANAV 323

Query: 186 AVGKYLMSKDYTIVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL 365
           A+G YLMSK Y++VTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL
Sbjct: 324 AIGNYLMSKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL 383

Query: 366 SPGGVRIGTPAMTSRGL 416
           +PGGVR+G PAMTSRGL
Sbjct: 384 APGGVRVGAPAMTSRGL 400


>gb|ACU21329.1| unknown [Glycine max]
          Length = 442

 Score =  260 bits (664), Expect = 9e-68
 Identities = 125/137 (91%), Positives = 131/137 (95%)
 Frame = +3

Query: 6   KKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVGLKQAASPGFKAYAKQVRANAV 185
           KKGQPE AVYDFEDKINFAVFP+LQGGPHNHQIGALAV LKQAASPGFKAYAKQV+ANAV
Sbjct: 264 KKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAASPGFKAYAKQVKANAV 323

Query: 186 AVGKYLMSKDYTIVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL 365
           A+G YLM K Y++VTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL
Sbjct: 324 ALGNYLMGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL 383

Query: 366 SPGGVRIGTPAMTSRGL 416
           +PGGVRIG PAMTSRGL
Sbjct: 384 APGGVRIGAPAMTSRGL 400


Top