BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022312
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   262   8e-68
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              262   8e-68
ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...   249   4e-64
ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   245   7e-63
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu...   242   6e-62

>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  262 bits (669), Expect = 8e-68
 Identities = 137/263 (52%), Positives = 181/263 (68%), Gaps = 5/263 (1%)
 Frame = -2

Query: 774 MGRKKQTKPHRSVGISQAND----ASGELKVQSGSSNGHKDIRELDVPFFVQVDSSSWCS 607
           MGR+KQ KPHRSVG+ +  +    A GEL  Q   + G  ++ + + P FV+VD + W S
Sbjct: 1   MGRRKQPKPHRSVGVVERLETQETAEGELNSQQEHAQGD-EVGDAETPLFVEVDRTGWGS 59

Query: 606 VEHYDIAEIILTDLHIREEFYGHVLSENLYWGDSKYFLRFRLLNASEHVGRIKLGHWPVL 427
            EH DI+EI+L DL++REEF+G+ L E  Y  +SK  LRFRL NA++ VGRI+LGHWPV+
Sbjct: 60  GEHLDISEIVLNDLNLREEFHGYSLGEGFY-ENSKCCLRFRLCNANQFVGRIRLGHWPVV 118

Query: 426 SADDIYAELIEKEDSEDA-ETSVVLVAGRFDGPDEGVSALVHLVGISFLTLRPIIGVTLS 250
           +A  I  E +EK  SE+  ET  V+++G FDGPDEGVS LVHL  +  LTLRP++GVT S
Sbjct: 119 AASSISLEFVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLKLLTLRPVLGVTFS 178

Query: 249 ESCSSLSIRVGILKRAFDACESLFDNTRGLWRKSMMRIMAWLRPEVVTSESRYGYTATAD 70
           E  S + +RV IL+ AFDACESL DN+R LW+KSMM +MAWLRPEV TSE+RYG   + +
Sbjct: 179 EGVSFVRLRVEILRTAFDACESLLDNSRPLWKKSMMSVMAWLRPEVTTSEARYGVAKSKE 238

Query: 69  VEIGLPVESDESAAASQKQTRFD 1
           ++I   +  D     S+K   FD
Sbjct: 239 MDIDSNMGMDVGDLDSKKHQNFD 261


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  262 bits (669), Expect = 8e-68
 Identities = 137/263 (52%), Positives = 181/263 (68%), Gaps = 5/263 (1%)
 Frame = -2

Query: 774 MGRKKQTKPHRSVGISQAND----ASGELKVQSGSSNGHKDIRELDVPFFVQVDSSSWCS 607
           MGR+KQ KPHRSVG+ +  +    A GEL  Q   + G  ++ + + P FV+VD + W S
Sbjct: 1   MGRRKQPKPHRSVGVVERLETQETAEGELNSQQEHAQGD-EVGDAETPLFVEVDRTGWGS 59

Query: 606 VEHYDIAEIILTDLHIREEFYGHVLSENLYWGDSKYFLRFRLLNASEHVGRIKLGHWPVL 427
            EH DI+EI+L DL++REEF+G+ L E  Y  +SK  LRFRL NA++ VGRI+LGHWPV+
Sbjct: 60  GEHLDISEIVLNDLNLREEFHGYSLGEGFY-ENSKCCLRFRLCNANQFVGRIRLGHWPVV 118

Query: 426 SADDIYAELIEKEDSEDA-ETSVVLVAGRFDGPDEGVSALVHLVGISFLTLRPIIGVTLS 250
           +A  I  E +EK  SE+  ET  V+++G FDGPDEGVS LVHL  +  LTLRP++GVT S
Sbjct: 119 AASSISLEFVEKRVSEEGIETDSVILSGIFDGPDEGVSGLVHLSRLKLLTLRPVLGVTFS 178

Query: 249 ESCSSLSIRVGILKRAFDACESLFDNTRGLWRKSMMRIMAWLRPEVVTSESRYGYTATAD 70
           E  S + +RV IL+ AFDACESL DN+R LW+KSMM +MAWLRPEV TSE+RYG   + +
Sbjct: 179 EGVSFVRLRVEILRTAFDACESLLDNSRPLWKKSMMSVMAWLRPEVTTSEARYGVAKSKE 238

Query: 69  VEIGLPVESDESAAASQKQTRFD 1
           ++I   +  D     S+K   FD
Sbjct: 239 MDIDSNMGMDVGDLDSKKHQNFD 261


>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
           gi|355516770|gb|AES98393.1| ATP-dependent helicase,
           putative [Medicago truncatula]
          Length = 1764

 Score =  249 bits (637), Expect = 4e-64
 Identities = 125/258 (48%), Positives = 176/258 (68%)
 Frame = -2

Query: 774 MGRKKQTKPHRSVGISQANDASGELKVQSGSSNGHKDIRELDVPFFVQVDSSSWCSVEHY 595
           MGR+K +KPHRS GI    +AS E +++ G    + D  ++  P+FV+VD S W S EH 
Sbjct: 1   MGRRK-SKPHRSGGIIVETNASAETELEVGGKENN-DFGDIYKPYFVEVDRSGWLSDEHL 58

Query: 594 DIAEIILTDLHIREEFYGHVLSENLYWGDSKYFLRFRLLNASEHVGRIKLGHWPVLSADD 415
           DI+EI+L DL+I E FYG  LSE+ Y  D ++ LRFRL N    +GRIKLGHWPVL   D
Sbjct: 59  DISEIVLRDLNIGEGFYGFELSEDFYQ-DPQFSLRFRLCNIGSDLGRIKLGHWPVLPYTD 117

Query: 414 IYAELIEKEDSEDAETSVVLVAGRFDGPDEGVSALVHLVGISFLTLRPIIGVTLSESCSS 235
           I+ E +++   +D ET  VL++G FDGPDE VS LVHL  + F+TLR ++G+ LS+   S
Sbjct: 118 IHLEFVKRASVDDTETCTVLLSGIFDGPDESVSGLVHLASMKFVTLRAVLGIKLSDDIPS 177

Query: 234 LSIRVGILKRAFDACESLFDNTRGLWRKSMMRIMAWLRPEVVTSESRYGYTATADVEIGL 55
           L +RV +LK AFDACESL + +R  W+KSMM +M+WLRPE++TSE +YG+++  ++E+ L
Sbjct: 178 LRMRVEVLKSAFDACESLIEGSRKPWKKSMMNVMSWLRPEIMTSEVKYGFSSYMEMEVDL 237

Query: 54  PVESDESAAASQKQTRFD 1
             +  +    + K +RFD
Sbjct: 238 QTDMADDGGYAGKCSRFD 255


>ref|XP_003519219.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Glycine max]
          Length = 1600

 Score =  245 bits (626), Expect = 7e-63
 Identities = 123/263 (46%), Positives = 173/263 (65%), Gaps = 5/263 (1%)
 Frame = -2

Query: 774 MGRKKQTKPHRSVGISQANDASGELKVQS-----GSSNGHKDIRELDVPFFVQVDSSSWC 610
           MGR+K +KP R+ GI    +A+ E ++       G      D   +D P+FV+VD   W 
Sbjct: 1   MGRQK-SKPQRAGGIILETNAAAETELDKQNVIEGGKETKGDSSGIDKPYFVEVDRCGWL 59

Query: 609 SVEHYDIAEIILTDLHIREEFYGHVLSENLYWGDSKYFLRFRLLNASEHVGRIKLGHWPV 430
           S EH DI+E++L+DL++RE F G  LSE+ Y  D +Y LRF++ N S  +GRIKLGHWPV
Sbjct: 60  SSEHLDISEVVLSDLNLREGFSGFELSEDFY-RDQQYLLRFQVCNVSNVLGRIKLGHWPV 118

Query: 429 LSADDIYAELIEKEDSEDAETSVVLVAGRFDGPDEGVSALVHLVGISFLTLRPIIGVTLS 250
           +   DI+ E + +   +  ET  VL++G FDGPDEGV+ L+HL  + F+TLRP++G  LS
Sbjct: 119 IPYTDIHLEFVRRVTIDHVETYTVLLSGIFDGPDEGVTGLLHLASLKFVTLRPVLGARLS 178

Query: 249 ESCSSLSIRVGILKRAFDACESLFDNTRGLWRKSMMRIMAWLRPEVVTSESRYGYTATAD 70
           E  SSL IRV +LK AFDACESL D++R LW+KSM+ +M+WLRPE++TSE RYG+     
Sbjct: 179 EEISSLRIRVEVLKSAFDACESLLDSSRQLWKKSMVNVMSWLRPEIMTSEVRYGFGTCMK 238

Query: 69  VEIGLPVESDESAAASQKQTRFD 1
           +E+   +E  +    ++K  RFD
Sbjct: 239 MEVDPQIEMADDTCKARKHARFD 261


>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222870983|gb|EEF08114.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1320

 Score =  242 bits (618), Expect = 6e-62
 Identities = 127/268 (47%), Positives = 179/268 (66%), Gaps = 10/268 (3%)
 Frame = -2

Query: 774 MGRKKQTKPHRSVGI----SQANDASGELKVQSGSSNGHKDIREL----DVPFFVQVDSS 619
           MGR+KQ +PHRS G+    + A  AS ELK Q  +S+      EL    + P+FV+V+ +
Sbjct: 1   MGRRKQARPHRSGGLIIQNNAAASASAELKNQRKASSSDAQPTELVGIDEQPYFVEVERN 60

Query: 618 SWCSVEHYDIAEIILTDLHIREEFYGHVLSENLYWGDSKYFLRFRLLNASEHV-GRIKLG 442
           SW S  H D +E++L  L++R+E+    +++  Y  DSKY LRFR+ N  + V  RIKLG
Sbjct: 61  SWASNHHRDASELVLHGLNLRQEYSSFRVTDGFYH-DSKYSLRFRVSNVKQSVLSRIKLG 119

Query: 441 HWPVLSADDIYAELIEKED-SEDAETSVVLVAGRFDGPDEGVSALVHLVGISFLTLRPII 265
           HWPV S+ DI  ELIEK    ED E   V+ +G FDGPDEG++ LVHL  + FLTLRP++
Sbjct: 120 HWPVFSSSDISLELIEKSMVEEDREVESVIFSGSFDGPDEGITGLVHLTNMEFLTLRPVL 179

Query: 264 GVTLSESCSSLSIRVGILKRAFDACESLFDNTRGLWRKSMMRIMAWLRPEVVTSESRYGY 85
           GV  SE  + L +RV IL++AFDACESL ++TR +W+KSMM +MAWLRPEV+TSE+RY +
Sbjct: 180 GVDFSEKMTPLRMRVEILEKAFDACESLLESTRQIWKKSMMNVMAWLRPEVMTSEARYRH 239

Query: 84  TATADVEIGLPVESDESAAASQKQTRFD 1
             + ++E+ +  E  +  + S K+ +FD
Sbjct: 240 AKSTEMEVNMAAEIGDDTSNSGKRAQFD 267