BLASTX nr result
ID: Bupleurum21_contig00022298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00022298
(854 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316659.1| predicted protein [Populus trichocarpa] gi|2... 89 1e-15
ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 86 1e-14
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 84 4e-14
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 84 4e-14
ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago trunc... 83 7e-14
>ref|XP_002316659.1| predicted protein [Populus trichocarpa] gi|222859724|gb|EEE97271.1|
predicted protein [Populus trichocarpa]
Length = 496
Score = 89.4 bits (220), Expect = 1e-15
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Frame = +2
Query: 8 LPDNIITAIFSFLTMKEAFYTCVSCTKLKRLITSIPNIEFEETADDRPIKRREFVQLVSR 187
LPD+++ IFSFL +K+A + T+ K ++F+ R +F +V++
Sbjct: 47 LPDDVLDMIFSFLPIKKAMQIGILSTRFKNSWNFNRRLDFDNDFA-RGRSPEDFKSIVNK 105
Query: 188 VLHNH-DDRIRKFQLSYRPHKNGSHILDWLSLAVKEGIEEVDLQF--------GGLYMKI 340
V H RI F+L + P++ + W+ ++++G+EE+DL+F G K+
Sbjct: 106 VFDRHAGSRILSFRLCFDPNREELLVEKWIRKSIEKGVEELDLEFYQSGNVFEGRWPFKL 165
Query: 341 PVSLMAASSLKVLKLKRCAVDDMASITGFKSLETLLLRSMYINDEVMDLLCCHCESLQQL 520
+ A SLK+LKL C +D + G L TL+LR + I ++D L +C L+ L
Sbjct: 166 NSDVYEAESLKILKLTLCQLDLPPKLKGLHVLNTLVLRKIIITPTLIDTLFQNCFFLETL 225
Query: 521 TLEECSGFEQVQIVHPSSKLKTLILDDCYE 610
L C ++I K L + DC E
Sbjct: 226 DLAHCHRIFHLKI-FAQKTFKVLKVGDCQE 254
>ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355477887|gb|AES59090.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 532
Score = 85.5 bits (210), Expect = 1e-14
Identities = 77/265 (29%), Positives = 118/265 (44%), Gaps = 27/265 (10%)
Frame = +2
Query: 2 SSLPDNIITAIFSFLTMKEAFYTCVSCTKLKRLITSIPNIEFE-------ETADDRPIKR 160
S LP ++I I S+L ++EA T V ++ + ++PNI F+ E D I
Sbjct: 59 SCLPGHVIDQILSYLPIREAVKTSVLSSEWRNKWHTLPNIVFDLNCVSNIEAIKDPSIFM 118
Query: 161 REFVQLVSRVLHNHDDRIRKFQLS-----YRPHKNGSHILDWLSLAVKEGIEEVDLQF-- 319
+ +++V VL H I KFQLS + + I W+ ++ I+E LQ
Sbjct: 119 SKLLRIVDHVLLLHSGPINKFQLSDPGCDLSDVNSVADIDRWILRLTEKSIKEFVLQIFV 178
Query: 320 GGLYMKIPVSLMAASSLKVLKLKRCAVDDMASITGFKSLETLLLRSMYINDEVMDLLCCH 499
Y KIP L + SL+ LKL C + + GFK+L++L L + + + + L
Sbjct: 179 AKKYYKIPQCLFSCQSLQNLKLDCCCIQPPTTFKGFKNLKSLELYQVTMAQDAFENLISG 238
Query: 500 CESLQQLTLEECSGFEQVQIVHPSSKLKTLILDD----CYEAAYRLNISSLKSLVIRKKH 667
C L+ L L G Q+ I P+ K K LI+ D ++ ++L L S R H
Sbjct: 239 CHLLEDLKLLYLEGLTQLNIHAPNLK-KFLIVGDFVDFSFDNTFQLTELGLFSFDSRSNH 297
Query: 668 MDFS---------FIGCPHIDSLFI 715
F PHI+SL I
Sbjct: 298 SQLRGCSSNLLRFFAHLPHIESLVI 322
>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 428
Score = 84.0 bits (206), Expect = 4e-14
Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 6/196 (3%)
Frame = +2
Query: 2 SSLPDNIITAIFSFLTMKEAFYTCVSCTKLKRLITSIPNIEFE-----ETADDRPIKRRE 166
SSLP +II I S L +KEA T + TK + ++PN+ F+ +T++D + + +
Sbjct: 20 SSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVIKSK 79
Query: 167 FVQLVSRVLHNHDDRIRKFQLSYRPHKNGSHILDWLSLAVKEGIEEVDLQ-FGGLYMKIP 343
+++ VL H I+KF+LS+R + I W + ++E L+ + G KIP
Sbjct: 80 LSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRYKIP 139
Query: 344 VSLMAASSLKVLKLKRCAVDDMASITGFKSLETLLLRSMYINDEVMDLLCCHCESLQQLT 523
L + L L+L C + ++ GF++L++L L+ + ++ + + L C L++LT
Sbjct: 140 SCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLERLT 199
Query: 524 LEECSGFEQVQIVHPS 571
L GF + I P+
Sbjct: 200 LMNFDGFNYLNIHAPN 215
>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 660
Score = 84.0 bits (206), Expect = 4e-14
Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 6/196 (3%)
Frame = +2
Query: 2 SSLPDNIITAIFSFLTMKEAFYTCVSCTKLKRLITSIPNIEFE-----ETADDRPIKRRE 166
SSLP +II I S L +KEA T + TK + ++PN+ F+ +T++D + + +
Sbjct: 252 SSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVIKSK 311
Query: 167 FVQLVSRVLHNHDDRIRKFQLSYRPHKNGSHILDWLSLAVKEGIEEVDLQ-FGGLYMKIP 343
+++ VL H I+KF+LS+R + I W + ++E L+ + G KIP
Sbjct: 312 LSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRYKIP 371
Query: 344 VSLMAASSLKVLKLKRCAVDDMASITGFKSLETLLLRSMYINDEVMDLLCCHCESLQQLT 523
L + L L+L C + ++ GF++L++L L+ + ++ + + L C L++LT
Sbjct: 372 SCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLERLT 431
Query: 524 LEECSGFEQVQIVHPS 571
L GF + I P+
Sbjct: 432 LMNFDGFNYLNIHAPN 447
>ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
gi|355478361|gb|AES59564.1| F-box/FBD/LRR-repeat protein
[Medicago truncatula]
Length = 293
Score = 83.2 bits (204), Expect = 7e-14
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 8/226 (3%)
Frame = +2
Query: 2 SSLPDNIITAIFSFLTMKEAFYTCVSCTKLKRLITSIPNIEFE-----ETADDRPIKRRE 166
SSLP ++I I S L +KEA T + T + T++PN+ F+ ET+ D + + +
Sbjct: 31 SSLPGHVIDHILSILPIKEAARTSILSTNWRYKWTTLPNLVFDNECLSETSKDLLVIKSK 90
Query: 167 FVQLVSRVLHNHDDRIRKFQLSYRPHKNGSHILDWLSLAVKEGIEEVDLQFG---GLYMK 337
+++ VL I+KF+LS R H + + I W + ++E L+ K
Sbjct: 91 LSRIIDHVLLLRSGPIKKFKLS-RDHIDVTDIDRWTLYLTRWQVKEFVLEIWKNPDQRYK 149
Query: 338 IPVSLMAASSLKVLKLKRCAVDDMASITGFKSLETLLLRSMYINDEVMDLLCCHCESLQQ 517
IP L + SL L+L C + ++ GFK+L++L L+ + + + ++ L C L++
Sbjct: 150 IPSWLFSCQSLHHLELLECWLIPPSTFQGFKNLKSLDLQYVTLTKDAVENLISSCLMLER 209
Query: 518 LTLEECSGFEQVQIVHPSSKLKTLILDDCYEAAYRLNISSLKSLVI 655
L L EC GF+ + I P+ L+ +++ +E N S L + I
Sbjct: 210 LILMECDGFKNLNIHAPN--LQYFLMEGKFEDISFKNTSQLADVFI 253