BLASTX nr result

ID: Bupleurum21_contig00022297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022297
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524402.1| DNA binding protein, putative [Ricinus commu...   312   1e-82
emb|CBI27073.3| unnamed protein product [Vitis vinifera]              311   2e-82
ref|XP_002278697.1| PREDICTED: transcription factor bHLH30 [Viti...   311   2e-82
ref|XP_002315961.1| predicted protein [Populus trichocarpa] gi|2...   307   3e-81
ref|XP_002311433.1| predicted protein [Populus trichocarpa] gi|2...   307   4e-81

>ref|XP_002524402.1| DNA binding protein, putative [Ricinus communis]
           gi|223536363|gb|EEF38013.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 367

 Score =  312 bits (799), Expect = 1e-82
 Identities = 171/230 (74%), Positives = 192/230 (83%), Gaps = 2/230 (0%)
 Frame = -3

Query: 909 SSSDHLRFLSDTV-VLGNMGQVPFGLQAELGKLTAQEMMDAKALXXXXXXXXXXXXXXXR 733
           SS DHLR ++DT+  +   G  PFGLQAELGK+TAQE+MDAKAL               R
Sbjct: 126 SSHDHLRIITDTLGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRER 185

Query: 732 INNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAESTPVPTEIDELTVDNEA 553
           INNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTS+IAE++PVPTEIDELTVD  +
Sbjct: 186 INNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELTVD-AS 244

Query: 552 DEDGRFIIKASICCEDRNDLLPDLIKTLKAMRLRTLKAEITSLGGRVKNVLFITGDGQES 373
           DEDG+FIIKAS+CCEDR+DLLPDLIKTLKA+RLRTLKAEIT+LGGRVKNVLFITG+   S
Sbjct: 245 DEDGKFIIKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDSS 304

Query: 372 NGGDEDDQQAHHEYSISSIQEALKAVMEKSHG-EVSPGSVKRQRTNINVI 226
           +  +E+DQQ   +YSISSIQEALKAVMEKS G E S GSVKRQRTNINV+
Sbjct: 305 SNSNEEDQQQQPQYSISSIQEALKAVMEKSGGDESSSGSVKRQRTNINVL 354


>emb|CBI27073.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score =  311 bits (798), Expect = 2e-82
 Identities = 180/297 (60%), Positives = 206/297 (69%), Gaps = 6/297 (2%)
 Frame = -3

Query: 1098 VMPWNLP--HGFNPVHFQTNXXXXXXXXXXXXXXXXXXXHYGGGAXXXXXXXXXXXXXXN 925
            + PW+ P  H FNP HF  N                    +   A               
Sbjct: 27   LQPWSFPPVHAFNPAHFAANPVRDHDPFLVPPPPSAYGSVFNRRAPALQ----------- 75

Query: 924  YDIIGSSSDHLRFLSDTV-VLGNMGQVPFGLQAELGKLTAQEMMDAKALXXXXXXXXXXX 748
            +   G SS+HLR +SDT+  +   G  PFGLQAELGK+TAQE+MDAKAL           
Sbjct: 76   FAYEGPSSEHLRIISDTLGPVVQPGSSPFGLQAELGKMTAQEIMDAKALAASKSHSEAER 135

Query: 747  XXXXRINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAESTPVPTEIDELT 568
                RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTS+IAES+PVPTE+DELT
Sbjct: 136  RRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVPTEMDELT 195

Query: 567  VDNEADEDGRFIIKASICCEDRNDLLPDLIKTLKAMRLRTLKAEITSLGGRVKNVLFITG 388
            VD  +DEDG+F+IKAS+CCEDR DLLPDLIKTLKA+RLRTLKAEIT+LGGRVKNVLFITG
Sbjct: 196  VDT-SDEDGKFVIKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITG 254

Query: 387  DGQESNGGD--EDDQQAHHEYSISSIQEALKAVMEKSHG-EVSPGSVKRQRTNINVI 226
            +   S+ G+  +  QQ   +YSISSIQEALKAVMEK+ G E S GSVKRQRTNIN+I
Sbjct: 255  EEDSSSSGENQQQQQQQQQQYSISSIQEALKAVMEKTGGDESSSGSVKRQRTNINII 311


>ref|XP_002278697.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
          Length = 349

 Score =  311 bits (798), Expect = 2e-82
 Identities = 180/297 (60%), Positives = 206/297 (69%), Gaps = 6/297 (2%)
 Frame = -3

Query: 1098 VMPWNLP--HGFNPVHFQTNXXXXXXXXXXXXXXXXXXXHYGGGAXXXXXXXXXXXXXXN 925
            + PW+ P  H FNP HF  N                    +   A               
Sbjct: 60   LQPWSFPPVHAFNPAHFAANPVRDHDPFLVPPPPSAYGSVFNRRAPALQ----------- 108

Query: 924  YDIIGSSSDHLRFLSDTV-VLGNMGQVPFGLQAELGKLTAQEMMDAKALXXXXXXXXXXX 748
            +   G SS+HLR +SDT+  +   G  PFGLQAELGK+TAQE+MDAKAL           
Sbjct: 109  FAYEGPSSEHLRIISDTLGPVVQPGSSPFGLQAELGKMTAQEIMDAKALAASKSHSEAER 168

Query: 747  XXXXRINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAESTPVPTEIDELT 568
                RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTS+IAES+PVPTE+DELT
Sbjct: 169  RRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVPTEMDELT 228

Query: 567  VDNEADEDGRFIIKASICCEDRNDLLPDLIKTLKAMRLRTLKAEITSLGGRVKNVLFITG 388
            VD  +DEDG+F+IKAS+CCEDR DLLPDLIKTLKA+RLRTLKAEIT+LGGRVKNVLFITG
Sbjct: 229  VDT-SDEDGKFVIKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITG 287

Query: 387  DGQESNGGD--EDDQQAHHEYSISSIQEALKAVMEKSHG-EVSPGSVKRQRTNINVI 226
            +   S+ G+  +  QQ   +YSISSIQEALKAVMEK+ G E S GSVKRQRTNIN+I
Sbjct: 288  EEDSSSSGENQQQQQQQQQQYSISSIQEALKAVMEKTGGDESSSGSVKRQRTNINII 344


>ref|XP_002315961.1| predicted protein [Populus trichocarpa] gi|222865001|gb|EEF02132.1|
            predicted protein [Populus trichocarpa]
          Length = 359

 Score =  307 bits (787), Expect = 3e-81
 Identities = 183/303 (60%), Positives = 211/303 (69%), Gaps = 7/303 (2%)
 Frame = -3

Query: 1113 MFP--TEVMPWNLP--HGFNPVHFQTNXXXXXXXXXXXXXXXXXXXHYGGGAXXXXXXXX 946
            +FP  + ++PW LP  H FNP HF  N                    YGG          
Sbjct: 55   IFPEVSPILPWPLPPVHSFNPAHFTPNHPVRDHDPFLIPPPVPSS--YGG-----LFNRR 107

Query: 945  XXXXXXNYDIIGSSSDHLRFLSDTV-VLGNMGQVPFGLQAELGKLTAQEMMDAKALXXXX 769
                   YD  G+ SDHLR +SDT+  +   G  PFGLQAEL K+TAQE+MDAKAL    
Sbjct: 108  APSLQFAYD--GTPSDHLRIISDTLGPVVQPGSAPFGLQAELSKMTAQEIMDAKALAASK 165

Query: 768  XXXXXXXXXXXRINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAESTPVP 589
                       RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQT++IAE++PVP
Sbjct: 166  SHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIAETSPVP 225

Query: 588  TEIDELTVDNEADEDGRFIIKASICCEDRNDLLPDLIKTLKAMRLRTLKAEITSLGGRVK 409
            TE+DELTVD  ADEDG+F+IKAS+CCEDR DLLPDLIKTLKA+RLRTLKAEIT+LGGRVK
Sbjct: 226  TEMDELTVDT-ADEDGKFVIKASLCCEDRPDLLPDLIKTLKALRLRTLKAEITTLGGRVK 284

Query: 408  NVLFITG-DGQESNGGDEDDQQAHHEYSISSIQEALKAVMEKSHG-EVSPGSVKRQRTNI 235
            NVLFI+G +   S+  D+  QQ   +YSISSIQEALKAVMEK+ G E S GSVKRQRTNI
Sbjct: 285  NVLFISGEEDSSSDSNDQHQQQEPLQYSISSIQEALKAVMEKTGGDESSSGSVKRQRTNI 344

Query: 234  NVI 226
            N++
Sbjct: 345  NLL 347


>ref|XP_002311433.1| predicted protein [Populus trichocarpa] gi|222851253|gb|EEE88800.1|
            predicted protein [Populus trichocarpa]
          Length = 352

 Score =  307 bits (786), Expect = 4e-81
 Identities = 182/304 (59%), Positives = 212/304 (69%), Gaps = 7/304 (2%)
 Frame = -3

Query: 1116 IMFP--TEVMPWNLP--HGFNPVHFQTNXXXXXXXXXXXXXXXXXXXHYGGGAXXXXXXX 949
            ++FP  + ++PW LP  H FNP HF +N                    YGG         
Sbjct: 52   LIFPEVSPILPWPLPPAHSFNPDHFTSNHPVRDHDPFLIPPPIPSS--YGG-----LFNR 104

Query: 948  XXXXXXXNYDIIGSSSDHLRFLSDTV-VLGNMGQVPFGLQAELGKLTAQEMMDAKALXXX 772
                    YD  G+SSDHLR +S+T+  +   G  PFGLQAEL  +TAQE+MDAKAL   
Sbjct: 105  RSPSLQFAYD--GTSSDHLRIISETLGPVVQPGSAPFGLQAELSNMTAQEIMDAKALAAS 162

Query: 771  XXXXXXXXXXXXRINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSIIAESTPV 592
                        RINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTS+IAE++PV
Sbjct: 163  KSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPV 222

Query: 591  PTEIDELTVDNEADEDGRFIIKASICCEDRNDLLPDLIKTLKAMRLRTLKAEITSLGGRV 412
            PTE+DELTVD  ADEDG+F++KAS+CCEDR+DLLPDLIKTLKA+RLRTLKAEIT+LGGRV
Sbjct: 223  PTEMDELTVDT-ADEDGKFVLKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRV 281

Query: 411  KNVLFITG-DGQESNGGDEDDQQAHHEYSISSIQEALKAVMEKSHG-EVSPGSVKRQRTN 238
            KNVLFI G +   S+  D   QQ   +YSISSIQEALK+VMEK+ G E S GSVKRQRTN
Sbjct: 282  KNVLFIAGEEDSSSDSNDHQQQQQPLQYSISSIQEALKSVMEKTGGDESSSGSVKRQRTN 341

Query: 237  INVI 226
            INV+
Sbjct: 342  INVL 345


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