BLASTX nr result

ID: Bupleurum21_contig00022279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022279
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595039.1| TMV resistance protein N [Medicago truncatul...   107   4e-21
gb|ABN05946.1| TIR [Medicago truncatula]                              107   4e-21
ref|XP_002276182.2| PREDICTED: TMV resistance protein N-like [Vi...   104   3e-20
emb|CAN83385.1| hypothetical protein VITISV_004581 [Vitis vinifera]   104   3e-20
emb|CAA08797.1| NL25 [Solanum tuberosum]                              103   4e-20

>ref|XP_003595039.1| TMV resistance protein N [Medicago truncatula]
           gi|355484087|gb|AES65290.1| TMV resistance protein N
           [Medicago truncatula]
          Length = 1128

 Score =  107 bits (266), Expect = 4e-21
 Identities = 62/174 (35%), Positives = 95/174 (54%), Gaps = 3/174 (1%)
 Frame = -2

Query: 855 VFLSFRGE-LRKNFTCHLSRELKRQGFRPFMDSENIDLGDEIYETXXXXXXXXXXXXXIL 679
           VF+SFRG+  R+ FT HL+  LK+ G + F+D   +  GDEI                IL
Sbjct: 24  VFISFRGDDTRRKFTSHLNEALKKSGLKTFIDDNELKKGDEISSALIKAIEESCASIVIL 83

Query: 678 SNEFASSVHCLNELVLILERNRTSKYFIIPIFYFVETDDVKHQLGKFGAAFERIKN--QH 505
           S  +ASS  CLNELV ILE  + +   +IPIFY ++   V++Q+G +G AF + +   +H
Sbjct: 84  SENYASSKWCLNELVKILECKKDNGQIVIPIFYEIDPSHVRYQIGSYGQAFAKYEKNLRH 143

Query: 504 NDDILEEWQAALAKIAGILGKEIKEKNGPVKSKIIEDIFATFQQKFYDTYPNSA 343
             D L++W+ AL +++ + G +   KN  ++S  I+DI     +K     P  A
Sbjct: 144 KKDNLQKWKDALTEVSKLSGWD--SKNSRIESDFIKDIVKDVLEKLNHGRPFEA 195


>gb|ABN05946.1| TIR [Medicago truncatula]
          Length = 1230

 Score =  107 bits (266), Expect = 4e-21
 Identities = 62/174 (35%), Positives = 95/174 (54%), Gaps = 3/174 (1%)
 Frame = -2

Query: 855 VFLSFRGE-LRKNFTCHLSRELKRQGFRPFMDSENIDLGDEIYETXXXXXXXXXXXXXIL 679
           VF+SFRG+  R+ FT HL+  LK+ G + F+D   +  GDEI                IL
Sbjct: 126 VFISFRGDDTRRKFTSHLNEALKKSGLKTFIDDNELKKGDEISSALIKAIEESCASIVIL 185

Query: 678 SNEFASSVHCLNELVLILERNRTSKYFIIPIFYFVETDDVKHQLGKFGAAFERIKN--QH 505
           S  +ASS  CLNELV ILE  + +   +IPIFY ++   V++Q+G +G AF + +   +H
Sbjct: 186 SENYASSKWCLNELVKILECKKDNGQIVIPIFYEIDPSHVRYQIGSYGQAFAKYEKNLRH 245

Query: 504 NDDILEEWQAALAKIAGILGKEIKEKNGPVKSKIIEDIFATFQQKFYDTYPNSA 343
             D L++W+ AL +++ + G +   KN  ++S  I+DI     +K     P  A
Sbjct: 246 KKDNLQKWKDALTEVSKLSGWD--SKNSRIESDFIKDIVKDVLEKLNHGRPFEA 297


>ref|XP_002276182.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1003

 Score =  104 bits (259), Expect = 3e-20
 Identities = 60/177 (33%), Positives = 99/177 (55%), Gaps = 3/177 (1%)
 Frame = -2

Query: 855 VFLSFRGE-LRKNFTCHLSRELKRQGFRPFMDSENIDLGDEIYETXXXXXXXXXXXXXIL 679
           VFLSFRG+  R NFT HL +EL+ +G   F D + ++ G  I                +L
Sbjct: 14  VFLSFRGDDTRNNFTAHLLQELRTKGINTFFDEDKLEKGRVISPALITAIENSMFSIIVL 73

Query: 678 SNEFASSVHCLNELVLILERNRTSKYFIIPIFYFVETDDVKHQLGKFGAAFERIKN--QH 505
           S  +ASS  CL E+V ILE NR+ +  ++PIFY V+  DV++ +GKFG A  + +   + 
Sbjct: 74  SENYASSRWCLEEMVKILECNRSKEERVLPIFYNVDPSDVRNHMGKFGEALAKHEENLEE 133

Query: 504 NDDILEEWQAALAKIAGILGKEIKEKNGPVKSKIIEDIFATFQQKFYDTYPNSAAES 334
           N + ++ W+ AL ++A + G + + KN P+   +I++I     +K  +T+ +   E+
Sbjct: 134 NGERVKIWRDALTEVANLSGWDSRNKNEPL---LIKEIVIKLLKKLLNTWTSDTEEN 187


>emb|CAN83385.1| hypothetical protein VITISV_004581 [Vitis vinifera]
          Length = 1024

 Score =  104 bits (259), Expect = 3e-20
 Identities = 60/177 (33%), Positives = 99/177 (55%), Gaps = 3/177 (1%)
 Frame = -2

Query: 855 VFLSFRGE-LRKNFTCHLSRELKRQGFRPFMDSENIDLGDEIYETXXXXXXXXXXXXXIL 679
           VFLSFRG+  R NFT HL +EL+ +G   F D + ++ G  I                +L
Sbjct: 14  VFLSFRGDDTRNNFTAHLLQELRTKGINTFFDEDKLEKGRVISPALITAIENSMFSIIVL 73

Query: 678 SNEFASSVHCLNELVLILERNRTSKYFIIPIFYFVETDDVKHQLGKFGAAFERIKN--QH 505
           S  +ASS  CL E+V ILE NR+ +  ++PIFY V+  DV++ +GKFG A  + +   + 
Sbjct: 74  SENYASSRWCLEEMVKILECNRSKEERVLPIFYNVDPSDVRNHMGKFGEALAKHEENLEE 133

Query: 504 NDDILEEWQAALAKIAGILGKEIKEKNGPVKSKIIEDIFATFQQKFYDTYPNSAAES 334
           N + ++ W+ AL ++A + G + + KN P+   +I++I     +K  +T+ +   E+
Sbjct: 134 NGERVKIWRDALTEVANLSGWDSRNKNEPL---LIKEIVIKLLKKLLNTWTSDTEEN 187


>emb|CAA08797.1| NL25 [Solanum tuberosum]
          Length = 533

 Score =  103 bits (258), Expect = 4e-20
 Identities = 61/177 (34%), Positives = 92/177 (51%), Gaps = 6/177 (3%)
 Frame = -2

Query: 855 VFLSFRGE-LRKNFTCHLSRELKRQGFRPFMDSENIDLGDEIYETXXXXXXXXXXXXXIL 679
           VFLSFRG+  RK FT HL   LK +G   F D + ++ GD I E              I 
Sbjct: 23  VFLSFRGDDTRKTFTSHLFEGLKHRGIFTFQDDKRLEKGDSIPEELLKAIEESQVALVIF 82

Query: 678 SNEFASSVHCLNELVLILERNRTSKYFIIPIFYFVETDDVKHQLGKFGAAFERIKNQHND 499
           S  +A+S  CLNELV I+E     K  ++P+FY V+  DV+HQ G F  AF + K+++ D
Sbjct: 83  SKNYATSRWCLNELVKIMECKEVKKQIVMPVFYDVDPSDVRHQTGSFAEAFSKHKSRYKD 142

Query: 498 DI-----LEEWQAALAKIAGILGKEIKEKNGPVKSKIIEDIFATFQQKFYDTYPNSA 343
           D+     ++ W+ AL+  A + G  +    G ++S+ I ++      K   T  +S+
Sbjct: 143 DVDGMQMVQGWRTALSAAADLSGTNVP---GRIESECIRELVDAVSSKLCKTSSSSS 196


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