BLASTX nr result

ID: Bupleurum21_contig00022278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022278
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...    62   5e-08
ref|XP_002330570.1| high mobility group family [Populus trichoca...    55   6e-06
ref|XP_003527572.1| PREDICTED: LOW QUALITY PROTEIN: high mobilit...    55   8e-06
ref|XP_002531766.1| transcription factor, putative [Ricinus comm...    55   8e-06

>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
           gi|296090037|emb|CBI39856.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -1

Query: 259 AENYNRLQPLYDRQEKAMNKKIWLLWSRLTEAEKQVYHNKG 137
           AENY RL+PLY  QE+A++KKI  LW+RLT+AEKQVY  KG
Sbjct: 268 AENYARLKPLYSGQERAISKKIGFLWNRLTDAEKQVYQEKG 308


>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
           gi|222872128|gb|EEF09259.1| high mobility group family
           [Populus trichocarpa]
          Length = 316

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = -1

Query: 256 ENYNRLQPLYDRQEKAMNKKIWLLWSRLTEAEKQVYHNKG 137
           E+Y +L+PL+  QEK ++KKI LLW+ LTEAEKQVY  KG
Sbjct: 257 EHYAQLKPLHHGQEKVISKKIGLLWNNLTEAEKQVYQEKG 296


>ref|XP_003527572.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group B protein
           10-like [Glycine max]
          Length = 339

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -1

Query: 259 AENYNRLQPLYDRQEKAMNKKIWLLWSRLTEAEKQVYHNKG 137
           AENY RL+P Y  QE+A++K+I  LW+ L+EAE+QVY  KG
Sbjct: 275 AENYARLKPSYHGQERAISKRIGFLWNNLSEAERQVYQEKG 315


>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
           gi|223528602|gb|EEF30622.1| transcription factor,
           putative [Ricinus communis]
          Length = 313

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = -1

Query: 259 AENYNRLQPLYDRQEKAMNKKIWLLWSRLTEAEKQVYHNKG*K 131
           AE+Y +L+PL+  QEK ++KKI LLW+ LTEAEK++Y  KG K
Sbjct: 253 AEHYAQLKPLHYGQEKVISKKIGLLWNNLTEAEKEIYQEKGLK 295


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