BLASTX nr result

ID: Bupleurum21_contig00022271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022271
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533753.1| transcription factor, putative [Ricinus comm...   268   1e-69
ref|XP_002533752.1| transcription factor, putative [Ricinus comm...   256   3e-66
ref|XP_002280790.1| PREDICTED: scarecrow-like protein 14-like [V...   255   7e-66
ref|XP_002314171.1| GRAS family transcription factor [Populus tr...   248   1e-63
ref|XP_002314172.1| GRAS family transcription factor [Populus tr...   248   1e-63

>ref|XP_002533753.1| transcription factor, putative [Ricinus communis]
            gi|223526341|gb|EEF28640.1| transcription factor,
            putative [Ricinus communis]
          Length = 764

 Score =  268 bits (684), Expect = 1e-69
 Identities = 153/274 (55%), Positives = 194/274 (70%), Gaps = 9/274 (3%)
 Frame = -1

Query: 797  LIIDLDKYSFPSDKKESPEKIEDKVGKEEVVVTPNSSRGRKHYQRQDSVVVYERNKKHSA 618
            L+IDL+  +   + KE   K+  K   EE   +P S +GRK+ +R+D     ER+ K SA
Sbjct: 262  LVIDLETNASIPEMKEKNTKVVVKEENEETEYSPISVKGRKNREREDDDFDEERSNKQSA 321

Query: 617  VYVEEETEISEMFDKVLLCG-----PP--YNKEPSEIG-RRSLHDNGQP-GSNPGKSRSK 465
            VYV+E TE++EMFDKVL+C      PP     + S+ G  ++L  NGQ  GSN GK+R+K
Sbjct: 322  VYVDE-TELAEMFDKVLVCTGGGCRPPGCILSDSSQSGSNKALQQNGQTNGSNGGKARAK 380

Query: 464  KKGSMTKEVDLRTLLISCAQSVAVGDRRTADEQLKQIRQNSSASGDATQRLADLFANGLE 285
            ++G+  + VDLRTLLI CAQ+V+  DRRTA+E LKQIRQ+SS  GD +QRLA  FANGLE
Sbjct: 381  RQGNKKEVVDLRTLLILCAQAVSSDDRRTANEILKQIRQHSSPFGDGSQRLAHCFANGLE 440

Query: 284  ARMAGTGTQIYASLANKKISAAQKLKAYEVYISATPFKYISMYFMNRMILDMSSNATTLH 105
            AR+AGTG QIY +L+++K+SAA  LKAY  YISA PF  I++ F N  IL +S NA+TLH
Sbjct: 441  ARLAGTGAQIYTALSSEKLSAADMLKAYLAYISACPFNKIAIIFANHNILAVSKNASTLH 500

Query: 104  IIDFGINYGFQWPMLIKLLSQRSGGPPKLRITGI 3
            IIDFGI YGFQWP LI  LS+R GGPPKLRITGI
Sbjct: 501  IIDFGILYGFQWPALIYRLSKREGGPPKLRITGI 534


>ref|XP_002533752.1| transcription factor, putative [Ricinus communis]
            gi|223526340|gb|EEF28639.1| transcription factor,
            putative [Ricinus communis]
          Length = 815

 Score =  256 bits (655), Expect = 3e-66
 Identities = 146/279 (52%), Positives = 196/279 (70%), Gaps = 14/279 (5%)
 Frame = -1

Query: 797  LIIDLDKYSFPSDKKESPEKIEDKVGKEEVVVTPNSSRGRKHYQRQDSVVVYERNKKHSA 618
            L+IDL+  SF + +KE    +  K  K +   +P+ SRGRK++ R+DS +   R+ K SA
Sbjct: 310  LVIDLESNSFANGQKEEAPVLVMKEEKAKRPSSPDESRGRKNHNREDSDLEQGRSSKQSA 369

Query: 617  VYVEEETEISEMFDKVLL----------CGPPYNKEP-SEIGRRSLHDNGQPGSNPGKSR 471
            VYVEE +EISE+FDKVLL          CGP  N++  S+I + ++  NG   SN GK+R
Sbjct: 370  VYVEE-SEISEVFDKVLLWPGLKGTQWCCGPEVNQDAASKIPQANIQSNG---SNGGKTR 425

Query: 470  SKKKGSMTKEVDLRTLLISCAQSVAVGDRRTADEQLKQIRQNSSASGDATQRLADLFANG 291
            SKK+    + VDLR+LLI CAQ+V+  D RTA+E +KQIRQ+SS  GD +QRLA  FANG
Sbjct: 426  SKKQSKKKETVDLRSLLILCAQAVSGNDFRTANELVKQIRQHSSPLGDGSQRLAHCFANG 485

Query: 290  LEARMAG--TGTQ-IYASLANKKISAAQKLKAYEVYISATPFKYISMYFMNRMILDMSSN 120
            LEAR+AG  TG Q  Y SLA+++ +AA  L+AY+ ++ A PFK +S+ F N+MI+  +  
Sbjct: 486  LEARLAGSVTGMQSFYTSLASRRRTAADILRAYKTHLHACPFKKLSILFANKMIMHAAEK 545

Query: 119  ATTLHIIDFGINYGFQWPMLIKLLSQRSGGPPKLRITGI 3
            ATTLHI+DFG++YGFQWP+LI+LLS R GGPPKLRITGI
Sbjct: 546  ATTLHIVDFGVSYGFQWPILIQLLSMRDGGPPKLRITGI 584


>ref|XP_002280790.1| PREDICTED: scarecrow-like protein 14-like [Vitis vinifera]
          Length = 760

 Score =  255 bits (652), Expect = 7e-66
 Identities = 145/270 (53%), Positives = 185/270 (68%), Gaps = 5/270 (1%)
 Frame = -1

Query: 797  LIIDLDKYSFPSDKKESPEKIEDKVGKEEVVVTPNSSRGRKHYQRQDSVVVYERNKKHSA 618
            L+IDL+  + P   K   +++  K  K+E   +P   RGRK+  R+D  +  ER++K SA
Sbjct: 264  LVIDLENGTLPPQSKVETQRVVVKTEKDERENSPKWLRGRKNLHREDHELE-ERSRKQSA 322

Query: 617  VYVEE-ETEISEMFDKVLLCGPPYNKEP----SEIGRRSLHDNGQPGSNPGKSRSKKKGS 453
            V++EE E E+SEMFD+VLLC  P  +       E    SL  +  P SN  K+R+KK  S
Sbjct: 323  VHLEEDEDELSEMFDRVLLCSDPKAERSYYCTGEEDCNSLQQSEHPQSNAEKTRTKK--S 380

Query: 452  MTKEVDLRTLLISCAQSVAVGDRRTADEQLKQIRQNSSASGDATQRLADLFANGLEARMA 273
              + VDLRTLLI CAQ V+  D RTA+E LKQIRQ+SS  GD +QRLA  FA GLEAR+A
Sbjct: 381  SKEVVDLRTLLIHCAQVVSTYDLRTANELLKQIRQHSSPFGDGSQRLAHFFAEGLEARLA 440

Query: 272  GTGTQIYASLANKKISAAQKLKAYEVYISATPFKYISMYFMNRMILDMSSNATTLHIIDF 93
            GTGT+IY  LA+KK+SAA  LKAYE++++A P+K IS++F N MIL ++  A  LHIIDF
Sbjct: 441  GTGTEIYTVLASKKVSAAAMLKAYELFLAACPYKMISIFFANHMILRLAEKAKVLHIIDF 500

Query: 92   GINYGFQWPMLIKLLSQRSGGPPKLRITGI 3
            GI YGFQWP LI+ LS R GGPPKLRITGI
Sbjct: 501  GILYGFQWPGLIQRLSARPGGPPKLRITGI 530


>ref|XP_002314171.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222850579|gb|EEE88126.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 794

 Score =  248 bits (633), Expect = 1e-63
 Identities = 143/275 (52%), Positives = 186/275 (67%), Gaps = 10/275 (3%)
 Frame = -1

Query: 797  LIIDLDKYSFPSDKKESPEKIEDKVGKEEVVVTPNSSRGRKHYQRQDSVVVYERNKKHSA 618
            L+IDL+  +F + KKE   ++  K  K E   +PN SRGRK+++R+DS     R+ K SA
Sbjct: 293  LVIDLETNAFFTWKKEKTPRVVVKEEKSEADSSPNGSRGRKNHEREDSDPEEGRSNKQSA 352

Query: 617  VYVEEETEISEMFDKVLL------CGPPYNKEPSEIGRRSLHDNGQP-GSNPGKSRSKKK 459
            VYVEE  E+SEMFDKVLL      CG   N    E+G +SL  + Q  GS+ GK+R+K++
Sbjct: 353  VYVEEG-ELSEMFDKVLLWTGGQCCG---NDADQEVGCKSLQPDEQSNGSSGGKNRAKRQ 408

Query: 458  GSMTKEVDLRTLLISCAQSVAVGDRRTADEQLKQIRQNSSASGDATQRLADLFANGLEAR 279
                + VDLRTLLI CAQ+++  D RTA+E LKQIRQ+SS  GD TQRLA  FANGLEAR
Sbjct: 409  NKRMETVDLRTLLIICAQAISANDFRTANELLKQIRQHSSPFGDGTQRLAHFFANGLEAR 468

Query: 278  MAGTGT---QIYASLANKKISAAQKLKAYEVYISATPFKYISMYFMNRMILDMSSNATTL 108
            +AG+G        SLA+K+ +AA  LKAY+  + A PFK +S+ F  +MIL  +  ATTL
Sbjct: 469  LAGSGNGTPNFITSLASKRTTAADMLKAYKTQLRACPFKKLSIAFAIKMILHAAEKATTL 528

Query: 107  HIIDFGINYGFQWPMLIKLLSQRSGGPPKLRITGI 3
            HI+DFG+ YGFQWP+LI+ LS    GPPKLR+TGI
Sbjct: 529  HIVDFGVLYGFQWPILIQQLSLLPNGPPKLRLTGI 563


>ref|XP_002314172.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222850580|gb|EEE88127.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 762

 Score =  248 bits (632), Expect = 1e-63
 Identities = 145/277 (52%), Positives = 187/277 (67%), Gaps = 12/277 (4%)
 Frame = -1

Query: 797  LIIDLDKYSF-PSDKKESPEKI--EDKVGKEEVVVTPNSSRGRKHYQRQDSVVVYERNKK 627
            L+IDL+  S  P   + +P  +   +K  KE+    P    G+K+++R+D     ER+ K
Sbjct: 258  LVIDLENSSLAPEMNRNAPNVVVKAEKEDKEDKEYLPEWLTGKKNHEREDGDFEEERSNK 317

Query: 626  HSAVYVEEETEISEMFDKVLL----CGPP----YNKEPSEIGRRSLHDNGQP-GSNPGKS 474
             SAVYV+E +E+SEMFD +L     C PP    +  E  E G+ +L  NGQ  G+N  K+
Sbjct: 318  QSAVYVDE-SELSEMFDMLLGFGDGCQPPQCILHEAEQRESGK-TLQQNGQTRGTNGSKT 375

Query: 473  RSKKKGSMTKEVDLRTLLISCAQSVAVGDRRTADEQLKQIRQNSSASGDATQRLADLFAN 294
            R+K++G+  + VDLRT LI CAQ+V+V D RTA+E LKQIRQ+SS  GD +QRLA  FAN
Sbjct: 376  RAKRQGNNKEVVDLRTFLILCAQAVSVNDCRTANELLKQIRQHSSPLGDGSQRLAHCFAN 435

Query: 293  GLEARMAGTGTQIYASLANKKISAAQKLKAYEVYISATPFKYISMYFMNRMILDMSSNAT 114
             LEAR+AGTGTQIY +L+ +K SA   LKAY+ YISA PFK I+  F N  IL+++  A+
Sbjct: 436  ALEARLAGTGTQIYTALSAEKTSAVDMLKAYQAYISACPFKKIAFIFANHSILNVAEKAS 495

Query: 113  TLHIIDFGINYGFQWPMLIKLLSQRSGGPPKLRITGI 3
            TLHIIDFGI YGFQWP LI  LS R GGPPKLRITGI
Sbjct: 496  TLHIIDFGILYGFQWPSLIYRLSCRPGGPPKLRITGI 532


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