BLASTX nr result

ID: Bupleurum21_contig00022248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022248
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276148.2| PREDICTED: AT-rich interactive domain-contai...   133   2e-29
emb|CAN80959.1| hypothetical protein VITISV_037562 [Vitis vinifera]   133   2e-29
emb|CBI40441.3| unnamed protein product [Vitis vinifera]              130   2e-28
ref|XP_002298024.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-contai...   115   4e-24

>ref|XP_002276148.2| PREDICTED: AT-rich interactive domain-containing protein 1-like
           [Vitis vinifera]
          Length = 628

 Score =  133 bits (334), Expect = 2e-29
 Identities = 71/151 (47%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
 Frame = -1

Query: 487 MAGVVKITNGSALNCAKSVEGLVFNDFWVDLKSCSKGSIEGEQK-DYVKCLFDKIVSAFL 311
           MAG   I +GSAL+C K ++    N  W  L+  SKG + G      ++C FD+ +  FL
Sbjct: 1   MAGWSMIADGSALDCVKILKPQE-NGLWFVLEPGSKGIVVGGGGISELRCSFDQFLGPFL 59

Query: 310 SENSGNKCFRPFPPMIGNGQSVDLLKLYLVVKEKGGYEHVSDNGLWDFVAKEFGLSFRFG 131
            +  G+  +RP PPM+GNGQ VDL KL+L+VKEKGGY  VS+N LW+ VA+E GL    G
Sbjct: 60  KQIRGHNSYRPLPPMLGNGQCVDLFKLFLLVKEKGGYRTVSENVLWNLVAEESGLDSGVG 119

Query: 130 SSLKLIYSKYLDSIDEWMQRTVNVKDLKGKL 38
           S+LKL+Y KYLD +D W+ R    K   G L
Sbjct: 120 SALKLVYIKYLDLLDRWLDRIFKDKKSHGSL 150


>emb|CAN80959.1| hypothetical protein VITISV_037562 [Vitis vinifera]
          Length = 724

 Score =  133 bits (334), Expect = 2e-29
 Identities = 71/151 (47%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
 Frame = -1

Query: 487 MAGVVKITNGSALNCAKSVEGLVFNDFWVDLKSCSKGSIEGEQK-DYVKCLFDKIVSAFL 311
           MAG   I +GSAL+C K ++    N  W  L+  SKG + G      ++C FD+ +  FL
Sbjct: 1   MAGWSMIADGSALDCVKILKPQE-NGLWFVLEPGSKGIVVGGGGISELRCSFDQFLGPFL 59

Query: 310 SENSGNKCFRPFPPMIGNGQSVDLLKLYLVVKEKGGYEHVSDNGLWDFVAKEFGLSFRFG 131
            +  G+  +RP PPM+GNGQ VDL KL+L+VKEKGGY  VS+N LW+ VA+E GL    G
Sbjct: 60  KQIRGHNSYRPLPPMLGNGQCVDLFKLFLLVKEKGGYRTVSENVLWNLVAEESGLDSGVG 119

Query: 130 SSLKLIYSKYLDSIDEWMQRTVNVKDLKGKL 38
           S+LKL+Y KYLD +D W+ R    K   G L
Sbjct: 120 SALKLVYIKYLDLLDRWLDRIFKDKKSHGSL 150


>emb|CBI40441.3| unnamed protein product [Vitis vinifera]
          Length = 594

 Score =  130 bits (326), Expect = 2e-28
 Identities = 69/151 (45%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
 Frame = -1

Query: 487 MAGVVKITNGSALNCAKSVEGLVFNDFWVDLKSCSKGSIEGEQK-DYVKCLFDKIVSAFL 311
           + G   I +GSAL+C K ++    N  W  L+  SKG + G      ++C FD+ +  FL
Sbjct: 8   LIGWSMIADGSALDCVKILKPQE-NGLWFVLEPGSKGIVVGGGGISELRCSFDQFLGPFL 66

Query: 310 SENSGNKCFRPFPPMIGNGQSVDLLKLYLVVKEKGGYEHVSDNGLWDFVAKEFGLSFRFG 131
            +  G+  +RP PPM+GNGQ VDL KL+L+VKEKGGY  VS+N LW+ VA+E GL    G
Sbjct: 67  KQIRGHNSYRPLPPMLGNGQCVDLFKLFLLVKEKGGYRTVSENVLWNLVAEESGLDSGVG 126

Query: 130 SSLKLIYSKYLDSIDEWMQRTVNVKDLKGKL 38
           S+LKL+Y KYLD +D W+ R    K   G L
Sbjct: 127 SALKLVYIKYLDLLDRWLDRIFKDKKSHGSL 157


>ref|XP_002298024.1| predicted protein [Populus trichocarpa] gi|222845282|gb|EEE82829.1|
           predicted protein [Populus trichocarpa]
          Length = 648

 Score =  115 bits (289), Expect = 3e-24
 Identities = 67/167 (40%), Positives = 96/167 (57%), Gaps = 18/167 (10%)
 Frame = -1

Query: 487 MAGVVKITNGSALNCAKSVEGLVFNDF-----------------WVDLKSCSKGSIEGEQ 359
           MAG   +TNGSAL+C   V  +   D                  W+ + +  +   E E 
Sbjct: 1   MAGWSILTNGSALDCVDDVINIYKGDGGCCLDINHHVKDDEAKDWIAIDNSDEDDYECED 60

Query: 358 KDYVKCLFDKIVSAFLSENSGNKCFRPFPPMIGNGQSVDLLKLYLVVKEKGGYEHVSDNG 179
           K  V CLFD++VS FL+E +   C RP P ++G+GQS+DL KL+ VV+++GG++ V  NG
Sbjct: 61  K--VICLFDELVSKFLNETAEGGCIRPIPALLGDGQSLDLFKLFWVVRKRGGFDLV--NG 116

Query: 178 LWDFVAKEFGLSFRFGSSLKLIYSKYLDSIDEWMQRTVNVKDL-KGK 41
            W FVAKE GL  +F  S+KLIY KYL  +++ M R+   + + KGK
Sbjct: 117 FWSFVAKELGLELQFSPSVKLIYIKYLYELEKCMSRSCKEEKIRKGK 163


>ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-containing protein 2-like
           [Vitis vinifera]
          Length = 601

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/129 (45%), Positives = 83/129 (64%)
 Frame = -1

Query: 463 NGSALNCAKSVEGLVFNDFWVDLKSCSKGSIEGEQKDYVKCLFDKIVSAFLSENSGNKCF 284
           NGS L+C ++      +   VD+ +    S+ G  K  ++ LFD+++  F+ E  GN+C 
Sbjct: 9   NGSVLDCGETGGSCETDGICVDIGN--NNSLNGTDK--LQVLFDQVLLIFMKEVLGNECV 64

Query: 283 RPFPPMIGNGQSVDLLKLYLVVKEKGGYEHVSDNGLWDFVAKEFGLSFRFGSSLKLIYSK 104
           RP P M+G+G+SVDL KL+ VV+ KGGYE VSD GLW  VA+E GL     + LKLIY K
Sbjct: 65  RPIPAMLGDGRSVDLFKLFWVVRGKGGYEWVSDKGLWGLVAEECGLDVGVKTCLKLIYFK 124

Query: 103 YLDSIDEWM 77
           YLD +D+W+
Sbjct: 125 YLDQLDQWL 133


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