BLASTX nr result

ID: Bupleurum21_contig00022203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022203
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283820.1| PREDICTED: uncharacterized protein LOC100264...    75   6e-12
emb|CAN77202.1| hypothetical protein VITISV_001593 [Vitis vinifera]    75   6e-12
ref|XP_004163006.1| PREDICTED: uncharacterized protein LOC101226...    68   9e-10
ref|XP_002327790.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
emb|CBI17481.3| unnamed protein product [Vitis vinifera]               63   2e-08

>ref|XP_002283820.1| PREDICTED: uncharacterized protein LOC100264004 [Vitis vinifera]
          Length = 216

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 3/65 (4%)
 Frame = -2

Query: 187 MDCFDI---KVEKANAILRYKRLEKITALFRFMEVCIFLFLISRLCNHLPFAFKVSGDCI 17
           MD F+I   KVEKANAILRY++L KIT LFR +EVC+ L L+S+    LPFA KVSG+  
Sbjct: 1   MDSFEIDSIKVEKANAILRYRQLRKITNLFRVIEVCLVLILVSKFSFQLPFAIKVSGEYF 60

Query: 16  RGLSV 2
           R LSV
Sbjct: 61  RDLSV 65


>emb|CAN77202.1| hypothetical protein VITISV_001593 [Vitis vinifera]
          Length = 216

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 3/65 (4%)
 Frame = -2

Query: 187 MDCFDI---KVEKANAILRYKRLEKITALFRFMEVCIFLFLISRLCNHLPFAFKVSGDCI 17
           MD F+I   KVEKANAILRY++L KIT LFR +EVC+ L L+S+    LPFA KVSG+  
Sbjct: 1   MDSFEIDSIKVEKANAILRYRQLRKITNLFRVIEVCLVLILVSKFSFQLPFAIKVSGEYF 60

Query: 16  RGLSV 2
           R LSV
Sbjct: 61  RDLSV 65


>ref|XP_004163006.1| PREDICTED: uncharacterized protein LOC101226152 [Cucumis sativus]
          Length = 228

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/64 (50%), Positives = 46/64 (71%)
 Frame = -2

Query: 193 QKMDCFDIKVEKANAILRYKRLEKITALFRFMEVCIFLFLISRLCNHLPFAFKVSGDCIR 14
           + ++ +DI+ EKANAIL+Y++  KI  LFRF+E+C+ L +ISR  +HLP A K S +  R
Sbjct: 2   ESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYFR 61

Query: 13  GLSV 2
            LSV
Sbjct: 62  CLSV 65


>ref|XP_002327790.1| predicted protein [Populus trichocarpa] gi|222836875|gb|EEE75268.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/56 (53%), Positives = 42/56 (75%)
 Frame = -2

Query: 172 IKVEKANAILRYKRLEKITALFRFMEVCIFLFLISRLCNHLPFAFKVSGDCIRGLS 5
           +KVEKANAIL+Y RL+ +T LFR +E C+ + L+S + N LPFA K+SG+  R L+
Sbjct: 9   VKVEKANAILKYNRLQTLTKLFRLLEFCLAIILLSWIFNKLPFAVKISGEFFRRLA 64


>emb|CBI17481.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
 Frame = -2

Query: 187 MDCFD---IKVEKANAILRYKRLEKITALFRFMEVCIFLFLISRLCNHLPFAFKVSGDCI 17
           MD FD   +K EKANA+L+Y+RL  +T LFRF E+ + L L   +  HLPFA ++SG+  
Sbjct: 1   MDSFDFDSVKAEKANAMLKYRRLRNVTKLFRFAELFLVLILFFWIFTHLPFAIQISGEYF 60

Query: 16  RGLS 5
           R +S
Sbjct: 61  RKIS 64


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