BLASTX nr result

ID: Bupleurum21_contig00022194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022194
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Rici...   276   4e-72
ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vit...   270   3e-70
ref|XP_002298709.1| predicted protein [Populus trichocarpa] gi|2...   265   8e-69
ref|XP_002331879.1| predicted protein [Populus trichocarpa] gi|2...   255   1e-65
ref|XP_003526853.1| PREDICTED: RING-H2 finger protein ATL78-like...   241   2e-61

>ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Ricinus communis]
           gi|223538562|gb|EEF40166.1| RING-H2 finger protein
           ATL1L, putative [Ricinus communis]
          Length = 223

 Score =  276 bits (707), Expect = 4e-72
 Identities = 134/207 (64%), Positives = 159/207 (76%)
 Frame = +3

Query: 6   NFYSRKLLLHSPVYQKQAAATPPLGGNNHTASESYTGDNSFDANXXXXXXXXXXXXXXXX 185
           +FYSR+LLLH+P+Y    AA PP  G +  ASE YTG+NSFDAN                
Sbjct: 17  DFYSRRLLLHTPLYHSPTAAAPPAPGYSQEASEPYTGNNSFDANVVMVLSVLLCALICSL 76

Query: 186 GLNSMVRCALRCSRLVASESTESSSARLANTGIKKKALKTFPIVNYSSELKLPGLDAECV 365
           GLNS++RCALRCS LVAS S ++SSA LANTG+K+KALKTFP VNYS++L LPGLD EC 
Sbjct: 77  GLNSIIRCALRCSSLVASRSADNSSAGLANTGVKRKALKTFPTVNYSTDLNLPGLDTECA 136

Query: 366 ICLSEFAPGERVKVLPKCNHGFHIRCIDRWLNSHSSCPTCRQCLIQTCQKIVGCNIPSTP 545
           ICLSEF PGERV++LPKCNHGFH+RCID+WL+SHSSCPTCR CLI+TCQKIVGC+  S+ 
Sbjct: 137 ICLSEFTPGERVRLLPKCNHGFHVRCIDKWLSSHSSCPTCRHCLIETCQKIVGCSQTSSS 196

Query: 546 LPISSQQESIIVRIAPLEPEGVVRSYQ 626
            P    QES IV IAPLEPE ++RSY+
Sbjct: 197 DP--PVQES-IVNIAPLEPEALIRSYR 220


>ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vitis vinifera]
           gi|147833208|emb|CAN75293.1| hypothetical protein
           VITISV_042413 [Vitis vinifera]
          Length = 224

 Score =  270 bits (691), Expect = 3e-70
 Identities = 132/210 (62%), Positives = 158/210 (75%), Gaps = 3/210 (1%)
 Frame = +3

Query: 6   NFYSRKLLLHSPVYQKQAAATPPLGGNNHTASESYTGDNSFDANXXXXXXXXXXXXXXXX 185
           +FYSR+LLLHSP+++  A A+PP  GN+H +SE YTG NSFD N                
Sbjct: 18  DFYSRRLLLHSPLHESPATASPPATGNSHDSSEPYTGSNSFDTNVVMVLSVLLCALICSL 77

Query: 186 GLNSMVRCALRCSRLVASESTESSSARLANTGIKKKALKTFPIVNYSSELKLPGLDAECV 365
           GLNS++RCALRCS LVAS    S S RLANTG+KKKALKTFP +NYS+ L LPGLD ECV
Sbjct: 78  GLNSIIRCALRCSSLVASPGN-SPSTRLANTGVKKKALKTFPTLNYSAGLNLPGLDTECV 136

Query: 366 ICLSEFAPGERVKVLPKCNHGFHIRCIDRWLNSHSSCPTCRQCLIQTCQKIVGCNIPS-- 539
           ICLS+F PGER+++LPKCNHGFH+RCID+WLNSHSSCPTCR CLI+TCQKI+GC+  S  
Sbjct: 137 ICLSDFTPGERIRILPKCNHGFHVRCIDKWLNSHSSCPTCRHCLIETCQKIIGCSQASSS 196

Query: 540 -TPLPISSQQESIIVRIAPLEPEGVVRSYQ 626
            TP P+   QES+I  I PLEPEG  R+Y+
Sbjct: 197 ETPPPL---QESMI--IVPLEPEGFSRNYR 221


>ref|XP_002298709.1| predicted protein [Populus trichocarpa] gi|222845967|gb|EEE83514.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  265 bits (678), Expect = 8e-69
 Identities = 126/208 (60%), Positives = 155/208 (74%), Gaps = 1/208 (0%)
 Frame = +3

Query: 6   NFYSRKLLLHSPVYQKQAAATPPLGGNNHTASESYTG-DNSFDANXXXXXXXXXXXXXXX 182
           +FYSR+LLLH+P+YQ    ATPP  GN   +SE+YT  DNSFDAN               
Sbjct: 18  DFYSRRLLLHTPLYQSSNTATPPAPGNT-ASSETYTSTDNSFDANVVMVLSILLCALICS 76

Query: 183 XGLNSMVRCALRCSRLVASESTESSSARLANTGIKKKALKTFPIVNYSSELKLPGLDAEC 362
            GLNS++RCALRCS LVASES  + S + ANTG+K+KALKTFPIV YS++L LPGLD +C
Sbjct: 77  LGLNSIIRCALRCSNLVASESAANPSTQAANTGVKRKALKTFPIVKYSTDLNLPGLDTQC 136

Query: 363 VICLSEFAPGERVKVLPKCNHGFHIRCIDRWLNSHSSCPTCRQCLIQTCQKIVGCNIPST 542
           VICLSEF PGE V++LPKCNHGFH++CID+WL+SHSSCPTCR CLI+TC+KI GC+  ST
Sbjct: 137 VICLSEFTPGEHVRLLPKCNHGFHVKCIDKWLSSHSSCPTCRHCLIETCKKIAGCSQAST 196

Query: 543 PLPISSQQESIIVRIAPLEPEGVVRSYQ 626
             P S   +  IV I PLEPEG++ +Y+
Sbjct: 197 SGPTSLPVQEAIVSILPLEPEGLISNYR 224


>ref|XP_002331879.1| predicted protein [Populus trichocarpa] gi|222874628|gb|EEF11759.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  255 bits (651), Expect = 1e-65
 Identities = 120/207 (57%), Positives = 152/207 (73%)
 Frame = +3

Query: 6   NFYSRKLLLHSPVYQKQAAATPPLGGNNHTASESYTGDNSFDANXXXXXXXXXXXXXXXX 185
           +FYSR+LLLH+P+YQ    ATPP  GN+  +  S    +SFDAN                
Sbjct: 17  DFYSRRLLLHNPLYQSTNTATPPAPGNSAPSEPSTGTGSSFDANVVMVLSVLLCALICSL 76

Query: 186 GLNSMVRCALRCSRLVASESTESSSARLANTGIKKKALKTFPIVNYSSELKLPGLDAECV 365
           GLNS++RCALRCS + ASES  + S + ANTG+ ++ALK+FP+VNYSS+L LPGLD ECV
Sbjct: 77  GLNSIIRCALRCSNIAASESAANPSTQSANTGVNRRALKSFPVVNYSSDLNLPGLDTECV 136

Query: 366 ICLSEFAPGERVKVLPKCNHGFHIRCIDRWLNSHSSCPTCRQCLIQTCQKIVGCNIPSTP 545
           ICLSEF PGERV++LPKC+HGFH++CID+WL+SHSSCPTCR CLI+TCQKI+GC+  ST 
Sbjct: 137 ICLSEFTPGERVRLLPKCHHGFHVKCIDKWLSSHSSCPTCRHCLIETCQKIIGCSQASTS 196

Query: 546 LPISSQQESIIVRIAPLEPEGVVRSYQ 626
                 QE+ IV I PLEPEG++R Y+
Sbjct: 197 GTSLPVQET-IVSILPLEPEGLIRDYR 222


>ref|XP_003526853.1| PREDICTED: RING-H2 finger protein ATL78-like [Glycine max]
          Length = 236

 Score =  241 bits (615), Expect = 2e-61
 Identities = 125/218 (57%), Positives = 156/218 (71%), Gaps = 13/218 (5%)
 Frame = +3

Query: 12  YSRKLLLHSPVYQKQAAATPPLGGNNHTASESYTGDNSFDANXXXXXXXXXXXXXXXXGL 191
           YSR+LLLHSP Y  Q+A  P    ++ +++E+Y GD +FDAN                GL
Sbjct: 22  YSRRLLLHSP-YLNQSAKPPR--SSHDSSTETYLGDGNFDANVVMVLSVLLCALICSLGL 78

Query: 192 NSMVRCALRCSRLVASESTESSS-------ARLANTGIKKKALKTFPIVNYSSELKLPGL 350
           NS++RCALRCS  V S+S  +++       AR+ANTG+KKKALKTF  V+YS+EL LP L
Sbjct: 79  NSIIRCALRCSNFVVSDSVATNNNNNNPPAARVANTGVKKKALKTFTTVSYSAELNLPSL 138

Query: 351 DAECVICLSEFAPGERVKVLPKCNHGFHIRCIDRWLNSHSSCPTCRQCLIQTCQKIVGCN 530
           D+ECVICLSEF  GE+V++LPKCNHGFHIRCID+WL+SHSSCP CRQCLI+TCQKIVGC 
Sbjct: 139 DSECVICLSEFTSGEKVRILPKCNHGFHIRCIDKWLSSHSSCPKCRQCLIETCQKIVGC- 197

Query: 531 IPSTPLPISSQQ------ESIIVRIAPLEPEGVVRSYQ 626
             ST    SSQQ      E+I+  IAPLEPEG+VR+Y+
Sbjct: 198 --STQQASSSQQHVLAVPETIVTIIAPLEPEGLVRNYR 233


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