BLASTX nr result

ID: Bupleurum21_contig00022190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022190
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246...   195   4e-48
ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C,...   191   4e-47
ref|XP_002320502.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002301585.1| predicted protein [Populus trichocarpa] gi|2...   184   6e-45
ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [...   183   1e-44

>ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
          Length = 478

 Score =  195 bits (495), Expect = 4e-48
 Identities = 83/122 (68%), Positives = 105/122 (86%)
 Frame = +2

Query: 2   VKRAVPKDLSPSPIRSPLGGFNYGLGRISNLLSGYNQGYSPSTAGGYGVRMDSRFSPITA 181
           VKRAVPK+LSP PIRS LGGFNYGL R+++ LS YNQGY+PST GGYGVRMD RFSPI  
Sbjct: 178 VKRAVPKELSPGPIRSQLGGFNYGLSRVNSFLSAYNQGYAPSTVGGYGVRMDGRFSPIAG 237

Query: 182 GRGGFAPFGSGQGMGLNIEAGMTPNFGGNANFNSSISYGRGMNPYYVANSNRFTNSVGFD 361
           GR GF PFGSG GMG+N E G++ ++GG+ANFN++++YGRG+NPYY+ N+NRF +++G+D
Sbjct: 238 GRSGFPPFGSGYGMGMNFEPGLSQSYGGSANFNNNLNYGRGLNPYYIGNTNRFNSTIGYD 297

Query: 362 GG 367
           GG
Sbjct: 298 GG 299


>ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
           communis] gi|223528341|gb|EEF30383.1| Heterogeneous
           nuclear ribonucleoprotein 27C, putative [Ricinus
           communis]
          Length = 484

 Score =  191 bits (486), Expect = 4e-47
 Identities = 81/122 (66%), Positives = 101/122 (82%)
 Frame = +2

Query: 2   VKRAVPKDLSPSPIRSPLGGFNYGLGRISNLLSGYNQGYSPSTAGGYGVRMDSRFSPITA 181
           VKRAVPK+LSP P RSPLGG+NYGL R+++ L+GY QGY+PS  GGYG+RMD RFSP+  
Sbjct: 179 VKRAVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQGYTPSAVGGYGLRMDGRFSPVAG 238

Query: 182 GRGGFAPFGSGQGMGLNIEAGMTPNFGGNANFNSSISYGRGMNPYYVANSNRFTNSVGFD 361
           GR GF PFGSG GMG+N E   +P++GGNANF+S++SYGRGM+PYY+ N+NRF N  G+D
Sbjct: 239 GRSGFPPFGSGYGMGMNFEPAFSPSYGGNANFSSNLSYGRGMSPYYIGNTNRFANPTGYD 298

Query: 362 GG 367
           GG
Sbjct: 299 GG 300


>ref|XP_002320502.1| predicted protein [Populus trichocarpa] gi|222861275|gb|EEE98817.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  186 bits (471), Expect = 2e-45
 Identities = 80/122 (65%), Positives = 98/122 (80%)
 Frame = +2

Query: 2   VKRAVPKDLSPSPIRSPLGGFNYGLGRISNLLSGYNQGYSPSTAGGYGVRMDSRFSPITA 181
           VKRAVPK+LSP P RSPLGG+NYGL R+++ L+GY QGY+P T GGYG+RMD RFS +  
Sbjct: 179 VKRAVPKELSPGPSRSPLGGYNYGLNRVNSFLNGYTQGYTPGTVGGYGLRMDGRFSSVAG 238

Query: 182 GRGGFAPFGSGQGMGLNIEAGMTPNFGGNANFNSSISYGRGMNPYYVANSNRFTNSVGFD 361
            R GF PFGSG GMG+N E  ++P++GGNANFNS++SYGRGMNPYY+ NSN     VG+D
Sbjct: 239 VRSGFPPFGSGYGMGMNFEPALSPSYGGNANFNSNLSYGRGMNPYYIGNSNSLARPVGYD 298

Query: 362 GG 367
           GG
Sbjct: 299 GG 300


>ref|XP_002301585.1| predicted protein [Populus trichocarpa] gi|222843311|gb|EEE80858.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  184 bits (467), Expect = 6e-45
 Identities = 79/122 (64%), Positives = 99/122 (81%)
 Frame = +2

Query: 2   VKRAVPKDLSPSPIRSPLGGFNYGLGRISNLLSGYNQGYSPSTAGGYGVRMDSRFSPITA 181
           VKRAVPK+LSP P RSPLGG+NYGL R+++LL+GY QGY+P   GGYG+RMD RFS +  
Sbjct: 179 VKRAVPKELSPGPSRSPLGGYNYGLNRVNSLLNGYTQGYTPGAVGGYGLRMDDRFSLVAG 238

Query: 182 GRGGFAPFGSGQGMGLNIEAGMTPNFGGNANFNSSISYGRGMNPYYVANSNRFTNSVGFD 361
           GR GF PFGSG GMGLN E  ++P++GG+ANFNS++SYGRGM+PYY+ N+N     VG+D
Sbjct: 239 GRSGFPPFGSGYGMGLNFEPALSPSYGGDANFNSNLSYGRGMSPYYIGNTNNLARPVGYD 298

Query: 362 GG 367
           GG
Sbjct: 299 GG 300


>ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
           gi|355525053|gb|AET05507.1| Heterogeneous nuclear
           ribonucleoprotein A1 [Medicago truncatula]
          Length = 476

 Score =  183 bits (465), Expect = 1e-44
 Identities = 77/122 (63%), Positives = 100/122 (81%)
 Frame = +2

Query: 2   VKRAVPKDLSPSPIRSPLGGFNYGLGRISNLLSGYNQGYSPSTAGGYGVRMDSRFSPITA 181
           VKRAVPK+LSP P RSPL G+NYGL R+++ L+G+NQ YSPST GGYG+R+D RFSP+  
Sbjct: 161 VKRAVPKELSPGPARSPLSGYNYGLSRVNSFLNGFNQSYSPSTVGGYGLRVDGRFSPVAG 220

Query: 182 GRGGFAPFGSGQGMGLNIEAGMTPNFGGNANFNSSISYGRGMNPYYVANSNRFTNSVGFD 361
           GR  +APFGSG GMG+N E G++P FGGNA+FN ++SYGRG+NPY++  SNRF + VG++
Sbjct: 221 GRNAYAPFGSGYGMGMNFEPGLSPGFGGNASFNGNLSYGRGLNPYFIGGSNRFGSPVGYE 280

Query: 362 GG 367
            G
Sbjct: 281 SG 282


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