BLASTX nr result
ID: Bupleurum21_contig00022176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00022176
(308 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI25399.3| unnamed protein product [Vitis vinifera] 139 2e-31
ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containi... 139 2e-31
ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arab... 120 9e-26
emb|CBI15852.3| unnamed protein product [Vitis vinifera] 117 7e-25
ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
>emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 139 bits (350), Expect = 2e-31
Identities = 69/103 (66%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
Frame = -2
Query: 307 ISVLKAIGMLGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVF-SKFI 131
+SV KA+G L D + GK+V SE G+ NV VGTALIDMYSKCGSLHDA+SVF + FI
Sbjct: 272 VSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFI 331
Query: 130 NSEMNMPWNAMISGYSISNCSKDALELYVKMCQNNIKSDIYTY 2
N +N PWNAMISGYS S CS++ALELYV+MCQN I SD+YTY
Sbjct: 332 NCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTY 374
Score = 69.3 bits (168), Expect = 3e-10
Identities = 38/100 (38%), Positives = 63/100 (63%)
Frame = -2
Query: 304 SVLKAIGMLGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVFSKFINS 125
SVL + L + G+QVH + ++G+ + + +ALIDMY+KCGS+ +A VF K N
Sbjct: 478 SVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNP 537
Query: 124 EMNMPWNAMISGYSISNCSKDALELYVKMCQNNIKSDIYT 5
++ + W A+ISGY+ +DAL+L+ +M + IK++ T
Sbjct: 538 DI-VSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVT 576
Score = 58.9 bits (141), Expect = 4e-07
Identities = 30/92 (32%), Positives = 52/92 (56%)
Frame = -2
Query: 280 LGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVFSKFINSEMNMPWNA 101
L + GK VH + G +++ V T+L++MY+K GS+ D+ VF+ + + WNA
Sbjct: 180 LDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFN-MMTEHNQVSWNA 238
Query: 100 MISGYSISNCSKDALELYVKMCQNNIKSDIYT 5
MISG + + +A +L+V+M ++YT
Sbjct: 239 MISGCTSNGLHLEAFDLFVRMKNGACTPNMYT 270
>ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 139 bits (350), Expect = 2e-31
Identities = 69/103 (66%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
Frame = -2
Query: 307 ISVLKAIGMLGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVF-SKFI 131
+SV KA+G L D + GK+V SE G+ NV VGTALIDMYSKCGSLHDA+SVF + FI
Sbjct: 326 VSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFI 385
Query: 130 NSEMNMPWNAMISGYSISNCSKDALELYVKMCQNNIKSDIYTY 2
N +N PWNAMISGYS S CS++ALELYV+MCQN I SD+YTY
Sbjct: 386 NCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTY 428
Score = 69.3 bits (168), Expect = 3e-10
Identities = 38/100 (38%), Positives = 63/100 (63%)
Frame = -2
Query: 304 SVLKAIGMLGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVFSKFINS 125
SVL + L + G+QVH + ++G+ + + +ALIDMY+KCGS+ +A VF K N
Sbjct: 532 SVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNP 591
Query: 124 EMNMPWNAMISGYSISNCSKDALELYVKMCQNNIKSDIYT 5
++ + W A+ISGY+ +DAL+L+ +M + IK++ T
Sbjct: 592 DI-VSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVT 630
Score = 58.9 bits (141), Expect = 4e-07
Identities = 30/92 (32%), Positives = 52/92 (56%)
Frame = -2
Query: 280 LGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVFSKFINSEMNMPWNA 101
L + GK VH + G +++ V T+L++MY+K GS+ D+ VF+ + + WNA
Sbjct: 234 LDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFN-MMTEHNQVSWNA 292
Query: 100 MISGYSISNCSKDALELYVKMCQNNIKSDIYT 5
MISG + + +A +L+V+M ++YT
Sbjct: 293 MISGCTSNGLHLEAFDLFVRMKNGACTPNMYT 324
>ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata] gi|297312278|gb|EFH42702.1| hypothetical protein
ARALYDRAFT_919404 [Arabidopsis lyrata subsp. lyrata]
Length = 749
Score = 120 bits (302), Expect = 9e-26
Identities = 57/103 (55%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
Frame = -2
Query: 307 ISVLKAIGMLGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVF-SKFI 131
ISV KAIG LGD +KG+ +++ E GM SN+ VGTALIDM++KCG + ++ SVF S F
Sbjct: 269 ISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFS 328
Query: 130 NSEMNMPWNAMISGYSISNCSKDALELYVKMCQNNIKSDIYTY 2
+N+PWNAMISG++IS ++A+ L+++MCQNNIK D+YTY
Sbjct: 329 GCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTY 371
Score = 68.9 bits (167), Expect = 4e-10
Identities = 37/88 (42%), Positives = 53/88 (60%)
Frame = -2
Query: 301 VLKAIGMLGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVFSKFINSE 122
VL + L + G+QVH ++G + V + LIDMY+KCGS+ DA VF + +
Sbjct: 474 VLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPD 533
Query: 121 MNMPWNAMISGYSISNCSKDALELYVKM 38
+ + W AMISGY+ +KDALEL+ KM
Sbjct: 534 V-ISWTAMISGYAQHGMAKDALELFRKM 560
>emb|CBI15852.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 117 bits (294), Expect = 7e-25
Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Frame = -2
Query: 304 SVLKAIGMLGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVFSK-FIN 128
SVLKA+G + DA KG++VH V E GM SNV VGT+LIDMYSKCG L DA+SVF + F
Sbjct: 284 SVLKAVGKIRDATKGREVHHCVMEYGMESNVVVGTSLIDMYSKCGHLSDARSVFDRNFYK 343
Query: 127 SEMNMPWNAMISGYSISNCSKDALELYVKMCQNNIKSDIYTY 2
S++N PWNAMIS Y+ ++AL+L+++M N++K D+YTY
Sbjct: 344 SKVNNPWNAMISSYTQCGYWQEALDLFIEMSLNDVKPDLYTY 385
Score = 55.1 bits (131), Expect = 6e-06
Identities = 32/95 (33%), Positives = 56/95 (58%)
Frame = -2
Query: 304 SVLKAIGMLGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVFSKFINS 125
SVL A L + G+QVH + ++G+ + + ++L +MY+K G++ DA VF K +
Sbjct: 489 SVLVACASLSLLEYGRQVHGLICKAGLDDDNCIESSLTNMYAKSGNIIDAVEVFEKIVCP 548
Query: 124 EMNMPWNAMISGYSISNCSKDALELYVKMCQNNIK 20
++ + W+A+I GY+ A+EL KM Q+ I+
Sbjct: 549 DV-VSWSAIIYGYAQHGFLDKAVELVQKMEQSGIQ 582
>ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 117 bits (292), Expect = 1e-24
Identities = 62/103 (60%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Frame = -2
Query: 307 ISVLKAIGMLGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVF-SKFI 131
I V KAIGML D +K K+V Y E G+ SN VGTALIDM SKCGSL +A+S+F S FI
Sbjct: 276 IGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFI 335
Query: 130 NSEMNMPWNAMISGYSISNCSKDALELYVKMCQNNIKSDIYTY 2
N PWNAMISGY S ++ ALEL+ KMCQN+I D YTY
Sbjct: 336 TCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTY 378
Score = 67.0 bits (162), Expect = 1e-09
Identities = 35/101 (34%), Positives = 62/101 (61%)
Frame = -2
Query: 304 SVLKAIGMLGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVFSKFINS 125
SVL + L + G+QVH + + G+ + + +AL+DMY+KCG L DAK VF++ N+
Sbjct: 482 SVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNA 541
Query: 124 EMNMPWNAMISGYSISNCSKDALELYVKMCQNNIKSDIYTY 2
+ + W A+I+G++ DAL+L+ +M Q ++ + T+
Sbjct: 542 D-TVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTF 581
Score = 57.0 bits (136), Expect = 2e-06
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = -2
Query: 280 LGDADKGKQVHKYVSESGMVSNVRVGTALIDMYSKCGSLHDAKSVFSKFINSEMN-MPWN 104
L + G VH + G S+ V TAL++MY+K + D+ VF+ +E+N + WN
Sbjct: 184 LDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTM--TEVNVVSWN 241
Query: 103 AMISGYSISNCSKDALELYVKMCQNNIKSDIYTY 2
AMI+G++ ++ DA +L+++M + D T+
Sbjct: 242 AMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTF 275
Score = 55.8 bits (133), Expect = 3e-06
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Frame = -2
Query: 304 SVLKAIGMLGDADKGKQVHKYVSESGM-VSNVRVGTALIDMYSKCGSLHDAKSVFSKFIN 128
SV AI L GK+VH +SG+ V+ V + A+ + Y+KCGSL D + VF++ +
Sbjct: 380 SVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMED 439
Query: 127 SEMNMPWNAMISGYSISNCSKDALELYVKMCQNNIKSDIYTY 2
++ + W ++++ YS + A+E++ M I + +T+
Sbjct: 440 RDL-ISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTF 480