BLASTX nr result

ID: Bupleurum21_contig00022164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022164
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38005.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_002274872.1| PREDICTED: GATA transcription factor 5-like ...    62   5e-08
gb|ABB45844.1| hypothetical protein [Eutrema halophilum]               59   3e-07
ref|NP_201433.1| GATA transcription factor 5 [Arabidopsis thalia...    56   3e-06
emb|CBI17417.3| unnamed protein product [Vitis vinifera]               56   3e-06

>emb|CBI38005.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/104 (41%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
 Frame = +1

Query: 16  VDDENSNFTS-PGSGDFGSLPAVEPPFPVDEVEFLEWLSQFVYDSFSFS------GLTGN 174
           VDD+NSN +S  G+GDF SL A     P D++E LEWLS FV DS +         +TGN
Sbjct: 120 VDDDNSNSSSFSGTGDFESLSAGGLAVPADDLEHLEWLSHFVDDSSASELSLLCPAVTGN 179

Query: 175 STCTFDVNRSEPAAKKFTVLDLPKPVPKKARSKWPRRRPNGNIW 306
           S          PA  +  +   P P+P K RSK  R R +G  W
Sbjct: 180 SPSKRCEEEPRPALLRTPL--FPTPLPAKPRSK--RHRSSGRAW 219


>ref|XP_002274872.1| PREDICTED: GATA transcription factor 5-like [Vitis vinifera]
          Length = 317

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/104 (41%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
 Frame = +1

Query: 16  VDDENSNFTS-PGSGDFGSLPAVEPPFPVDEVEFLEWLSQFVYDSFSFS------GLTGN 174
           VDD+NSN +S  G+GDF SL A     P D++E LEWLS FV DS +         +TGN
Sbjct: 85  VDDDNSNSSSFSGTGDFESLSAGGLAVPADDLEHLEWLSHFVDDSSASELSLLCPAVTGN 144

Query: 175 STCTFDVNRSEPAAKKFTVLDLPKPVPKKARSKWPRRRPNGNIW 306
           S          PA  +  +   P P+P K RSK  R R +G  W
Sbjct: 145 SPSKRCEEEPRPALLRTPL--FPTPLPAKPRSK--RHRSSGRAW 184


>gb|ABB45844.1| hypothetical protein [Eutrema halophilum]
          Length = 332

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/88 (45%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
 Frame = +1

Query: 58  DFGSLPAVEPPFPVDEVEFLEWLSQFVYDSF---SFSGLTGNST--CTFDVNRSEPAAKK 222
           DFGSLP  E   P DE+  LEWLS FV DSF   S   LTG ST       +R  P    
Sbjct: 90  DFGSLPLSELSVPADELANLEWLSHFVDDSFMEYSAPNLTGTSTKPAWLTGDRKHPVTPA 149

Query: 223 FTVLDLPKPVPKKARSKWPRRRPNGNIW 306
                   PVP KARSK  R R  G +W
Sbjct: 150 TEESCFNSPVPAKARSK--RNRNGGKVW 175


>ref|NP_201433.1| GATA transcription factor 5 [Arabidopsis thaliana]
           gi|42573812|ref|NP_975002.1| GATA transcription factor 5
           [Arabidopsis thaliana]
           gi|71660777|sp|Q9FH57.1|GATA5_ARATH RecName: Full=GATA
           transcription factor 5 gi|10177426|dbj|BAB10711.1|
           GATA-binding transcription factor-like protein
           [Arabidopsis thaliana] gi|22531223|gb|AAM97115.1|
           GATA-binding transcription factor-like protein
           [Arabidopsis thaliana] gi|34098855|gb|AAQ56810.1|
           At5g66320 [Arabidopsis thaliana]
           gi|332010815|gb|AED98198.1| GATA transcription factor 5
           [Arabidopsis thaliana] gi|332010816|gb|AED98199.1| GATA
           transcription factor 5 [Arabidopsis thaliana]
          Length = 339

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/92 (42%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
 Frame = +1

Query: 49  GSGDFGSLPAVEPPFPVDEVEFLEWLSQFVYDSFS-FSG--LTGNST---CTFDVNRSEP 210
           G  DFGSLP  E   P D++  LEWLS FV DSF+ +SG  LTG  T        +R  P
Sbjct: 91  GCDDFGSLPTSELSLPADDLANLEWLSHFVEDSFTEYSGPNLTGTPTEKPAWLTGDRKHP 150

Query: 211 AAKKFTVLDLPKPVPKKARSKWPRRRPNGNIW 306
                       PVP KARSK  R R    +W
Sbjct: 151 VTAVTEETCFKSPVPAKARSK--RNRNGLKVW 180


>emb|CBI17417.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
 Frame = +1

Query: 13  IVDDENSNFTSPG---SGDFGSLPAVEPPFPVDEVEFLEWLSQFVYDSFS-FSGLTGNST 180
           + +++NSN T+       +F S+PA E   P D++  LEWLS FV DSFS +S    + T
Sbjct: 84  LTENDNSNLTTTTFSVKDEFPSVPATELTVPADDLADLEWLSHFVEDSFSEYSAPFPHGT 143

Query: 181 CTFDV-NRSEPAAKKFTVLD----LPKPVPKKARSKWPRRRPNGNIW 306
            T    N++E   +  T L     L  P P KARSK  R R  G +W
Sbjct: 144 LTEKAQNQTENPPEPETPLQIKSCLKTPFPAKARSK--RARTGGRVW 188


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