BLASTX nr result

ID: Bupleurum21_contig00022107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022107
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278029.1| PREDICTED: mitochondrial inner membrane prot...   311   5e-83
emb|CBI37125.3| unnamed protein product [Vitis vinifera]              305   3e-81
ref|XP_004148938.1| PREDICTED: mitochondrial inner membrane prot...   303   2e-80
ref|XP_002302044.1| predicted protein [Populus trichocarpa] gi|2...   301   5e-80
ref|XP_004148937.1| PREDICTED: mitochondrial inner membrane prot...   296   2e-78

>ref|XP_002278029.1| PREDICTED: mitochondrial inner membrane protease subunit 1-like
           [Vitis vinifera]
          Length = 205

 Score =  311 bits (797), Expect = 5e-83
 Identities = 145/182 (79%), Positives = 161/182 (88%)
 Frame = -1

Query: 561 WKGYKGGHITDTEVGDAIWKNFFQGKLTYLHWNKGQEMVPTIAEEGGTLLVRKLPVPNPM 382
           WK YKGG I+D EVGD +WKN FQGKLTYLHWNKG EM PTI E+GGTLLVRKLP  +P 
Sbjct: 23  WKSYKGGQISDREVGDVVWKNLFQGKLTYLHWNKGGEMAPTIGEQGGTLLVRKLPAADPT 82

Query: 381 HVFVGDVVVMKDPEKSENHLVRRLAAVEGYEMVSKDEKDEPFVLEKDQCWVLADNENLKP 202
            VFVGDVVV+KDPE+S+N+LVRRLAAVEGYEM S DEKDEPFVLEKDQCWVL+DNE LKP
Sbjct: 83  RVFVGDVVVLKDPEESDNYLVRRLAAVEGYEMGSTDEKDEPFVLEKDQCWVLSDNETLKP 142

Query: 201 KEAKDSRIFGPVPMTDIVGRVIYCLRTAVDHGPVQNSNFGMTRDSPVLEVELDVDEMAKN 22
            +A DSRIFGPVPM+DIVGRVIYCLRTAVDHG VQNS+F M +D+PVLE+ELDVDEMA+ 
Sbjct: 143 TQANDSRIFGPVPMSDIVGRVIYCLRTAVDHGRVQNSHFSMRKDTPVLEIELDVDEMARR 202

Query: 21  HK 16
           HK
Sbjct: 203 HK 204


>emb|CBI37125.3| unnamed protein product [Vitis vinifera]
          Length = 244

 Score =  305 bits (781), Expect = 3e-81
 Identities = 143/179 (79%), Positives = 159/179 (88%)
 Frame = -1

Query: 552 YKGGHITDTEVGDAIWKNFFQGKLTYLHWNKGQEMVPTIAEEGGTLLVRKLPVPNPMHVF 373
           YKGG I+D EVGD +WKN FQGKLTYLHWNKG EM PTI E+GGTLLVRKLP  +P  VF
Sbjct: 65  YKGGQISDREVGDVVWKNLFQGKLTYLHWNKGGEMAPTIGEQGGTLLVRKLPAADPTRVF 124

Query: 372 VGDVVVMKDPEKSENHLVRRLAAVEGYEMVSKDEKDEPFVLEKDQCWVLADNENLKPKEA 193
           VGDVVV+KDPE+S+N+LVRRLAAVEGYEM S DEKDEPFVLEKDQCWVL+DNE LKP +A
Sbjct: 125 VGDVVVLKDPEESDNYLVRRLAAVEGYEMGSTDEKDEPFVLEKDQCWVLSDNETLKPTQA 184

Query: 192 KDSRIFGPVPMTDIVGRVIYCLRTAVDHGPVQNSNFGMTRDSPVLEVELDVDEMAKNHK 16
            DSRIFGPVPM+DIVGRVIYCLRTAVDHG VQNS+F M +D+PVLE+ELDVDEMA+ HK
Sbjct: 185 NDSRIFGPVPMSDIVGRVIYCLRTAVDHGRVQNSHFSMRKDTPVLEIELDVDEMARRHK 243


>ref|XP_004148938.1| PREDICTED: mitochondrial inner membrane protease subunit 1-like
           isoform 2 [Cucumis sativus]
           gi|449507880|ref|XP_004163156.1| PREDICTED:
           mitochondrial inner membrane protease subunit 1-like
           isoform 2 [Cucumis sativus]
          Length = 205

 Score =  303 bits (775), Expect = 2e-80
 Identities = 142/183 (77%), Positives = 158/183 (86%)
 Frame = -1

Query: 561 WKGYKGGHITDTEVGDAIWKNFFQGKLTYLHWNKGQEMVPTIAEEGGTLLVRKLPVPNPM 382
           WK YKGG ITD EVG A+WKN  QGKLTYLHW KGQEM PT+ E GGTLLVRKLP  +  
Sbjct: 23  WKNYKGGRITDREVGHAVWKNLLQGKLTYLHWIKGQEMAPTVGEAGGTLLVRKLPDADST 82

Query: 381 HVFVGDVVVMKDPEKSENHLVRRLAAVEGYEMVSKDEKDEPFVLEKDQCWVLADNENLKP 202
            VF+GDVVV+K+PEK EN+LVRRLAAVEG+EM+S DEKD+PF LEKDQCW+LADNE LKP
Sbjct: 83  SVFIGDVVVVKEPEKPENYLVRRLAAVEGHEMLSTDEKDQPFTLEKDQCWLLADNEKLKP 142

Query: 201 KEAKDSRIFGPVPMTDIVGRVIYCLRTAVDHGPVQNSNFGMTRDSPVLEVELDVDEMAKN 22
           KEA DSR FGPV M+DIVGR IYCLR+AVDHGPVQNS+F M RDSP+LE+ELDVDEMAKN
Sbjct: 143 KEAYDSRTFGPVSMSDIVGRAIYCLRSAVDHGPVQNSDFSMKRDSPILEIELDVDEMAKN 202

Query: 21  HKA 13
           HKA
Sbjct: 203 HKA 205


>ref|XP_002302044.1| predicted protein [Populus trichocarpa] gi|222843770|gb|EEE81317.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  301 bits (771), Expect = 5e-80
 Identities = 140/183 (76%), Positives = 162/183 (88%)
 Frame = -1

Query: 561 WKGYKGGHITDTEVGDAIWKNFFQGKLTYLHWNKGQEMVPTIAEEGGTLLVRKLPVPNPM 382
           +K YKGG I + EV D +WKN FQGKLT+LHWNKGQEM PTI ++GGTLLVRKLP  +PM
Sbjct: 23  YKSYKGGIINNKEVYDTVWKNLFQGKLTFLHWNKGQEMAPTIGDQGGTLLVRKLPTADPM 82

Query: 381 HVFVGDVVVMKDPEKSENHLVRRLAAVEGYEMVSKDEKDEPFVLEKDQCWVLADNENLKP 202
            VFVGDVV++KDPEKS+N LVRRLAA+EGYEMVS DEKD+PFVL+KD+CWVLADN+ LKP
Sbjct: 83  RVFVGDVVLLKDPEKSDNFLVRRLAAIEGYEMVSTDEKDDPFVLDKDECWVLADNDKLKP 142

Query: 201 KEAKDSRIFGPVPMTDIVGRVIYCLRTAVDHGPVQNSNFGMTRDSPVLEVELDVDEMAKN 22
           KEA DSR FG + M++IVGRVIYCL+TAVDHGPVQNS+F M +DSPVLEVELDV+EMAKN
Sbjct: 143 KEANDSRTFGSISMSNIVGRVIYCLQTAVDHGPVQNSHFSMRKDSPVLEVELDVEEMAKN 202

Query: 21  HKA 13
           HKA
Sbjct: 203 HKA 205


>ref|XP_004148937.1| PREDICTED: mitochondrial inner membrane protease subunit 1-like
           isoform 1 [Cucumis sativus]
           gi|449507877|ref|XP_004163155.1| PREDICTED:
           mitochondrial inner membrane protease subunit 1-like
           isoform 1 [Cucumis sativus]
          Length = 211

 Score =  296 bits (758), Expect = 2e-78
 Identities = 142/189 (75%), Positives = 158/189 (83%), Gaps = 6/189 (3%)
 Frame = -1

Query: 561 WKGYKGGHITDTEVGDAIWKNFFQGKLTYLHWNKGQEMVPTIAEEGGTLLVRKLPVPNPM 382
           WK YKGG ITD EVG A+WKN  QGKLTYLHW KGQEM PT+ E GGTLLVRKLP  +  
Sbjct: 23  WKNYKGGRITDREVGHAVWKNLLQGKLTYLHWIKGQEMAPTVGEAGGTLLVRKLPDADST 82

Query: 381 ------HVFVGDVVVMKDPEKSENHLVRRLAAVEGYEMVSKDEKDEPFVLEKDQCWVLAD 220
                  VF+GDVVV+K+PEK EN+LVRRLAAVEG+EM+S DEKD+PF LEKDQCW+LAD
Sbjct: 83  CFLVHRSVFIGDVVVVKEPEKPENYLVRRLAAVEGHEMLSTDEKDQPFTLEKDQCWLLAD 142

Query: 219 NENLKPKEAKDSRIFGPVPMTDIVGRVIYCLRTAVDHGPVQNSNFGMTRDSPVLEVELDV 40
           NE LKPKEA DSR FGPV M+DIVGR IYCLR+AVDHGPVQNS+F M RDSP+LE+ELDV
Sbjct: 143 NEKLKPKEAYDSRTFGPVSMSDIVGRAIYCLRSAVDHGPVQNSDFSMKRDSPILEIELDV 202

Query: 39  DEMAKNHKA 13
           DEMAKNHKA
Sbjct: 203 DEMAKNHKA 211


Top