BLASTX nr result

ID: Bupleurum21_contig00022101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022101
         (2392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   483   e-134
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   479   e-132
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   463   e-127
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   457   e-126
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   455   e-125

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  483 bits (1244), Expect = e-134
 Identities = 271/796 (34%), Positives = 407/796 (51%), Gaps = 5/796 (0%)
 Frame = +2

Query: 2    GSEGDVALKLDISKAYDRVDWRFLKKRMQAMGFCSQWIKWMMLCVTTVSYEFCFNGLNVG 181
            G  G  A K+DISKAYD+++W +L   ++AMGF S+W++WM + V TVSY+  F G  +G
Sbjct: 34   GRIGYAAFKIDISKAYDKLEWNYLLSVLEAMGFSSKWLEWMRMRVCTVSYKVVFGGELLG 93

Query: 182  PVIPSRGIRQGDPISPYLFLFCVEGLSKALSKAVSEEVIHGIKVTSTAPTISHLLFVDDS 361
            P+ P+RG+RQ DP+SPYLF+   EGLS  L +     V+HG  V   A T+ HL F DD 
Sbjct: 94   PIYPTRGLRQEDPLSPYLFILAAEGLSALLKQGERCGVLHGCSVARGASTVLHLFFADDL 153

Query: 362  FLFFKANTVETEAIKLILDNYANASGQCINYQKSGIFFSSNVRTDTQVEISSLLGVHNGL 541
            +LFFKA   E+ ++K IL  Y N SGQ IN  KS + FS N     +  I S+L V    
Sbjct: 154  YLFFKATESESRSLKQILLRYQNLSGQEINLNKSALTFSRNTDDVVKRGICSILQVEEXA 213

Query: 542  QNSMYLGLPSLVGRSKKQVFGFIKERLWKRIQGWKAKKISRAGKTVLIKNVATAIPSYCM 721
               +YLG+P++VG++K+Q+F F++ ++W RIQ W  +++SRAGK + +K VA +IP+Y M
Sbjct: 214  DPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVM 273

Query: 722  SSFLLPRSLCNEMEVMMNKFWWQSGSSDRRGIKWVAWNGLSMSKCQGGLAFRNLYGYNVA 901
               LLP+ LC ++E MMN F+W S +   R I+W++W  +   K  GGL FR L  +N+A
Sbjct: 274  QLLLLPKDLCRDIESMMNGFFWDS-NPQCRSIRWMSWGKMCKQKKDGGLGFRKLXDFNLA 332

Query: 902  LMAKHVWKFIKDPQSLLSRFYKAKYFPDIHVLQAKVSPGSSFIWQGIVNAKNEVAHGYRW 1081
            L+AK  W+F+++P SL++R ++A+YF +   L A++    S++W+ I+ A+  +  G  W
Sbjct: 333  LLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYW 392

Query: 1082 ILGDGASIKCIQDPWLARKEDFRVDQSREYIDRNLMVADLFLQTEREWDRDKVLNVFSPS 1261
             +  G  ++   D WL    +  +          + V +L   TE  W  D + + F   
Sbjct: 393  SIASGTKVQVWGDSWLPDSSNRLIITPPVAGFDGIKVDELI--TEGLWREDFIRDKFMAR 450

Query: 1262 DAAIILATNIPAISVVDHLAWDRTTNGRYSVKTGY---QLWHDRNIGVGSVTQSN-GWSK 1429
            DA +IL+  +P  S  D ++W     G Y+ ++GY   + +      V S   SN  W++
Sbjct: 451  DADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTALVASDVDSNFVWAQ 510

Query: 1430 IWKADLPHKVKLFLWRFCRNNVPVKHRLNSKGVCIPLECPMCNSGIEDMVHVFFTCPFAV 1609
            +WK   P K+  F WR  RN +P +  L  + V  P+ CP+C S +E  +H    C  A 
Sbjct: 511  LWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAAR 570

Query: 1610 ACWQYIGWSVDISTEDYAPGWLLQKLQTASSSEILLIAKVFWGIWFFRNKKVWDNKSVTA 1789
              W   G ++          WL                 V WG+W+ RN  VW+ +   +
Sbjct: 571  DVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGRIWHS 630

Query: 1790 AIAMEWSAKSILDWKEAKEKRVKMITTHPIRVQEPVKWDKPGVGTLKLNVDAAIKLGDTS 1969
               +      +  W  A E     +T          KW KP  G +K+NVD A+      
Sbjct: 631  QQVVNGCFTMLESWFHANETLATAVTV----PSYSSKWQKPDYGWIKINVDGAV--FPDK 684

Query: 1970 FAMGLVLRDHTGALVSGKTVCKXXXXXXXXXXXXXXXXGLHWLIEMDHDRVVLESDSLSV 2149
             A+G V RDH G  + G                      L W+ E    R+V+E+D L V
Sbjct: 685  GAIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETDCLRV 744

Query: 2150 VRALQSSETNLLEVGLIIDACRLILDAKVNFSVSFVKRQANRVAHLVAKLPCSMNCQNII 2329
            V+A+Q         G II  C  +L   V+  V + +R AN  AH +A   CS    +I 
Sbjct: 745  VQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGACSFTSLHIW 804

Query: 2330 -TAPSGLLLESLLYDI 2374
               P   +L  L YD+
Sbjct: 805  GYTPPQCILSCLHYDV 820


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  479 bits (1234), Expect = e-132
 Identities = 264/759 (34%), Positives = 392/759 (51%), Gaps = 5/759 (0%)
 Frame = +2

Query: 35   ISKAYDRVDWRFLKKRMQAMGFCSQWIKWMMLCVTTVSYEFCFNGLNVGPVIPSRGIRQG 214
            IS AYDR++W +L+  M  MGFCS+W +W+M+CV +V Y    NG  +GP+IP RG+RQG
Sbjct: 1001 ISTAYDRINWEYLRSIMGKMGFCSKWSEWIMMCVESVDYSVILNGEKIGPIIPGRGLRQG 1060

Query: 215  DPISPYLFLFCVEGLSKALSKAVSEEVIHGIKVTSTAPTISHLLFVDDSFLFFKANTVET 394
            DP+SPYLF+ C EGLS  + +A     I G K+   AP ISHLLF DD FLFFKA + + 
Sbjct: 1061 DPLSPYLFIICAEGLSSLIRQAEGSGTISGAKICKNAPIISHLLFADDCFLFFKAKSGQA 1120

Query: 395  EAIKLILDNYANASGQCINYQKSGIFFSSNVRTDTQVEISSLLGVHNGLQNSMYLGLPSL 574
            + +K IL+ Y ++SGQ IN+QKS +F+S NV    +  IS +LGV   +    YLG+PS+
Sbjct: 1121 QGMKNILEMYESSSGQSINFQKSEVFYSRNVDDAVKASISQILGVQQVMGTGKYLGVPSM 1180

Query: 575  VGRSKKQVFGFIKERLWKRIQGWKAKKISRAGKTVLIKNVATAIPSYCMSSFLLPRSLCN 754
            VGRS+   F F+KER+WK+I  W +K +S+AG+  LIK+V  +IP Y MS F +P+S+  
Sbjct: 1181 VGRSRISTFKFVKERVWKKINSWSSKCLSQAGRETLIKSVLQSIPFYIMSIFAIPKSIIV 1240

Query: 755  EMEVMMNKFWWQSGSSDRRGIKWVAWNGLSMSKCQGGLAFRNLYGYNVALMAKHVWKFIK 934
            ++E M                       LS+ K +GGL F+NL  +N  ++ K  WKF+ 
Sbjct: 1241 DIEKM-----------------------LSIHKKEGGLGFKNLRAFNEGMLGKQAWKFMT 1277

Query: 935  DPQSLLSRFYKAKYFPDIHVLQAKVSPGSSFIWQGIVNAKNEVAHGYRWILGDGASIKCI 1114
            +P ++++R +KAKYF     L +K+    S++W+ I  AK  V+ GY+W +G G  I   
Sbjct: 1278 EPHNIVTRLFKAKYFNKCDFLDSKIGHNPSYVWRNIWGAKRVVSEGYKWSIGSGTDICVW 1337

Query: 1115 QDPWLARKEDFRVDQSREYIDRNLMVADLFLQTEREWDRDKVLNVFSPSDAAIILATNIP 1294
               WL      +  +S     + L VADLF+   R W+   + N+ S  D   IL T   
Sbjct: 1338 DQRWLVDGGVLQKPESLPEEFKELTVADLFISQTRFWNVGLLRNLVSNEDTNRILNT--- 1394

Query: 1295 AISVVDHLAWDRTTNGRYSVKTGYQLWHDRNIGVGSVTQSNGWSKIWKADLPHKVKLFLW 1474
             I   +HL+                    +++ + +      W  +W   +P KVK FLW
Sbjct: 1395 PIFEPNHLS--------------------QHVDLSTHRCDGNWVLLWNLKVPPKVKTFLW 1434

Query: 1475 RFCRNNVPVKHRLNSKGVCIPLECPMCNSGIEDMVHVFFTCPFAVACWQYIG-WSVDIST 1651
            R CRN +P + RL  +GV     C +C +  ED +H+FF C  +  CWQ +G WS     
Sbjct: 1435 RSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSRQCWQQLGLWSKVQQK 1494

Query: 1652 EDYAPGW---LLQKLQTASSSEILLIAKVFWGIWFFRNKKVWDNKSVTAAIAMEWSAKSI 1822
                  +   + + LQ   SS+ ++ A V W IW  RN  +W N+ +T A   +     +
Sbjct: 1495 AQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCIWRNEVMTTAAVRDRGLNLL 1554

Query: 1823 LDWKEAKEKRVKMITTHPIRVQEPVKWDKPGVGTLKLNVDAAIKLGDTSFAMGLVLRDHT 2002
              W+ A++                  W KP  G  K NVDAA         +G+ +RD +
Sbjct: 1555 TGWQNAQD-----------------IWRKPDEGHFKCNVDAAFFKESNRVGIGICIRDDS 1597

Query: 2003 GALVSGKTVCKXXXXXXXXXXXXXXXXGLHWLIEMDHDRVVLESDSLSVVRALQSSETNL 2182
            G LV  +T                    + W  E + + +  E DS  VV +  ++  ++
Sbjct: 1598 GRLVKARTSWSTLLLDVPEGEAIGLLYAIRWAKEQNLNNITFELDSKRVVYSFHNTRNDV 1657

Query: 2183 LEVGLIIDACRLILDA-KVNFSVSFVKRQANRVAHLVAK 2296
             ++G II  CR    +   N  V F++RQAN V H +A+
Sbjct: 1658 SDLGAIIRECRTTFSSFFTNSRVEFIRRQANEVVHSLAR 1696


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  463 bits (1191), Expect = e-127
 Identities = 270/785 (34%), Positives = 412/785 (52%), Gaps = 15/785 (1%)
 Frame = +2

Query: 11   GDVALKLDISKAYDRVDWRFLKKRMQAMGFCSQWIKWMMLCVTTVSYEFCFNGLNVGPVI 190
            G  ALKLD+SKAYDRV+W FL++ M+ MGFC  WI  +M C+++VS+ F  NG+  G + 
Sbjct: 572  GVCALKLDMSKAYDRVEWCFLERVMKKMGFCDGWIDRVMACISSVSFTFNVNGVVEGSLS 631

Query: 191  PSRGIRQGDPISPYLFLFCVEGLSKALSKAVSEEVIHGIKVTSTAPTISHLLFVDDSFLF 370
            PSRG+RQGDPISPYLFL C +  S  LSKA SE+ IHG ++   AP +SHL F DDS LF
Sbjct: 632  PSRGLRQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFADDSILF 691

Query: 371  FKANTVETEAIKLILDNYANASGQCINYQKSGIFFSSNVRTDTQVEISSLLGVHNGLQNS 550
             KA+  E   +  I+  Y  ASGQ +N  K+ + FS +V  + +  I ++LGV    +  
Sbjct: 692  TKASVQECSMVADIISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQE 751

Query: 551  MYLGLPSLVGRSKKQVFGFIKERLWKRIQGWKAKKISRAGKTVLIKNVATAIPSYCMSSF 730
             YLGLP+++GRSKK  F  IKER+WK++QGWK K +SR GK VLIK+VA AIP+Y MS F
Sbjct: 752  KYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVF 811

Query: 731  LLPRSLCNEMEVMMNKFWWQSGSSDRRGIKWVAWNGLSMSKCQGGLAFRNLYGYNVALMA 910
             LP  L +E+  ++ +FWW S  ++R+ + W +W+ L   K  GGL FR+L+ +N +L+A
Sbjct: 812  SLPSGLIDEIHSLLARFWWGSSDTNRK-MHWHSWDTLCYPKSMGGLGFRDLHCFNQSLLA 870

Query: 911  KHVWKFIKDPQSLLSRFYKAKYFPDIHVLQAKVSPGSSFIWQGIVNAKNEVAHGYRWILG 1090
            K  W+     Q+LL R  +A+YF    +L+A+     SF W+ I  +K+ +  G +W +G
Sbjct: 871  KQAWRLCTGDQTLLYRLLQARYFKSSELLEARRGYNPSFTWRSIWGSKSLLLEGLKWCVG 930

Query: 1091 DGASIKCIQDPWLARKEDFRVDQSREYIDRNLMVADLFLQTEREWDRDKVLNVFSPSDAA 1270
             G  I+  +D W+  +    V   +   + +L V DL       W+ + V   F   +  
Sbjct: 931  SGERIRVWEDAWILGEGAHMVPTPQADSNLDLKVCDLIDVARGAWNIESVQQTFVEEEWE 990

Query: 1271 IILATNIPAISVVDHLAWDRTTNGRYSVKTGYQLWHDRNIGVGSVTQSNG------WSKI 1432
            ++L+  +      DH  W  + NG +SV++ Y  W  R   V +    +G      W ++
Sbjct: 991  LVLSIPLSRFLPDDHRYWWPSRNGIFSVRSCY--WLGRLGPVRTWQLQHGERETELWRRV 1048

Query: 1433 WKADLPHKVKLFLWRFCRNNVPVKHRLNSKGVCIPLECPMCNSGIEDMVHVFFTCPFAVA 1612
            W+   P K+  FLWR C+ ++ VK RL S+ + +   C +C    E + H  F C FA A
Sbjct: 1049 WQLQGPPKLSHFLWRACKGSLAVKGRLFSRHISVDATCSVCGDPDESINHALFDCTFARA 1108

Query: 1613 CWQYIGW-----SVDISTEDYAPGWLLQKLQTASSSEILLIAKVFWGIWFFRNKKVWDNK 1777
             WQ  G+     +  +S+      WL +    A+  E   +    W  WF RNK +++N+
Sbjct: 1109 IWQVSGFASLMMNAPLSSFSERLEWLAKH---ATKEEFRTMCSFMWAGWFCRNKLIFENE 1165

Query: 1778 SVTAAIAMEWSAKSILDWKEAKEKRVKMITTHPIRVQEPVKWDKPGVGTLKLNVDAAIKL 1957
               A +  +  +K + D+ E       +             W  P  G  K+N DA +  
Sbjct: 1166 LSDAPLVAKRFSKLVADYCEYAG---SVFRGSGGGCGSSALWSPPPTGMFKVNFDAHLS- 1221

Query: 1958 GDTSFAMGLVLRDHTGALVSGKTVCKXXXXXXXXXXXXXXXXGLHWLIEMDH----DRVV 2125
             +    +G+V+R + G    G  +                     + +E+ H     R+V
Sbjct: 1222 PNGEVGLGVVIRANDG----GIKMLGVKRVAARWTAVMAEAMAALFAVEVAHRLGFGRIV 1277

Query: 2126 LESDSLSVVRALQSSETNLLEVGLIIDACRLILDAKVNFSVSFVKRQANRVAHLVAKLPC 2305
            LE D++ V+ A++     +  +  I +    +      FSVS V+R  N VAHL+A+  C
Sbjct: 1278 LEGDAMMVINAVKHKCEGVAPMFRIFNDISSLGACLDVFSVSHVRRAGNTVAHLLARWCC 1337

Query: 2306 SMNCQ 2320
              N +
Sbjct: 1338 DCNSE 1342


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  457 bits (1175), Expect = e-126
 Identities = 271/784 (34%), Positives = 396/784 (50%), Gaps = 14/784 (1%)
 Frame = +2

Query: 2    GSEGDVALKLDISKAYDRVDWRFLKKRMQAMGFCSQWIKWMMLCVTTVSYEFCFNGLNVG 181
            G  G  A KLD+SKAYDRV+W FL   M  +GF + W+  +M CV+TV+Y    NG    
Sbjct: 795  GQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSE 854

Query: 182  PVIPSRGIRQGDPISPYLFLFCVEGLSKALSKAVSEEVIHGIKVTSTAPTISHLLFVDDS 361
               P RG+RQGDP+SPYLFL C EG S  LSK   E  +HGI++   AP++SHLLF DDS
Sbjct: 855  SFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDS 914

Query: 362  FLFFKANTVETEAIKLILDNYANASGQCINYQKSGIFFSSNVRTDTQVEISSLLGVHNGL 541
             +  +AN  E + ++ IL  Y   SGQ IN  KS + FS N  +  +  + + L +    
Sbjct: 915  LILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRET 974

Query: 542  QNSMYLGLPSLVGRSKKQVFGFIKERLWKRIQGWKAKKISRAGKTVLIKNVATAIPSYCM 721
             N  YLGLP  VGRS+ ++F ++KER+W+RIQGWK K +SRAGK +LIK VA AIP++ M
Sbjct: 975  TNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAM 1034

Query: 722  SSFLLPRSLCNEMEVMMNKFWWQSGSSDRRGIKWVAWNGLSMSKCQGGLAFRNLYGYNVA 901
              F L + LC+++  M+ K+WW +   D + + W++WN L++ K  GGL FR++Y +N+A
Sbjct: 1035 GCFELTKDLCDQISKMIAKYWWSNQEKDNK-MHWLSWNKLTLPKNMGGLGFRDIYIFNLA 1093

Query: 902  LMAKHVWKFIKDPQSLLSRFYKAKYFPDIHVLQAKVSPGSSFIWQGIVNAKNEVAHGYRW 1081
            ++AK  W+ I+DP SL SR  +AKYFP     + K +   S+ W+ I      + +G  W
Sbjct: 1094 MLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIW 1153

Query: 1082 ILGDGASIKCIQDPWLARKEDFRVDQSREYIDRNLMVADLFLQTEREWDRDKVLNVFSPS 1261
             +GDG+ I    DPW+ R    R   +    +    V +L       WD D +   F   
Sbjct: 1154 RMGDGSKINIWADPWIPRGWS-RKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEE 1212

Query: 1262 DAAIILATNIPA-ISVVDHLAWDRTTNGRYSVKTGYQLWHD------RNIGVGSVTQSNG 1420
            D A I   +IP  + + D LAW     G ++VK+ Y++  +      RN   G     +G
Sbjct: 1213 DVAAI--KSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESG 1270

Query: 1421 ----WSKIWKADLPHKVKLFLWRFCRNNVPVKHRLNSKGVCIPLECPMCNSGIEDMVHVF 1588
                W K+WK  +P K+K FLWR C N + ++  L  +G+ +   C MC    ED  H+F
Sbjct: 1271 DDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLF 1330

Query: 1589 FTCPFAVACWQYIGW-SVDISTEDYAPGW-LLQKLQTASSSEILLIAKVFWGIWFFRNKK 1762
            F C      WQ +    +    E    G  +LQ +      E        W  W  R   
Sbjct: 1331 FKCKPVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPEIERTSAIVCLWQWWKER--- 1387

Query: 1763 VWDNKSVTAAIAMEWSAKSILDWKEAKEKRVKMITTHPIRVQEPVKWDKPGVGTLKLNVD 1942
               N+     I    +  S L   +A E     +     R  E   W +P +  +K+N D
Sbjct: 1388 ---NEVREGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGECAVWRRPPLNFVKINTD 1444

Query: 1943 AAIKLGDTSFAMGLVLRDHTGALVSGKTVCKXXXXXXXXXXXXXXXXGLHWLIEMDHDRV 2122
             A          G V+RD TGA++                        +    E    R+
Sbjct: 1445 GAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRI 1504

Query: 2123 VLESDSLSVVRALQSSETNLLEV-GLIIDACRLILDAKVNFSVSFVKRQANRVAHLVAKL 2299
             LE+DS+ +  A+Q +  NL  + G+I++   +IL    +FSVS+  R  N+VAH +A  
Sbjct: 1505 ELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFSVSYSPRSCNKVAHELAAY 1564

Query: 2300 PCSM 2311
             C++
Sbjct: 1565 GCNL 1568


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  455 bits (1171), Expect = e-125
 Identities = 269/784 (34%), Positives = 398/784 (50%), Gaps = 14/784 (1%)
 Frame = +2

Query: 2    GSEGDVALKLDISKAYDRVDWRFLKKRMQAMGFCSQWIKWMMLCVTTVSYEFCFNGLNVG 181
            G  G  A KLD+SKAYDRV+W FL   +  +GF + W+  +M CV+TV+Y    NG    
Sbjct: 822  GQVGYAAFKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSE 881

Query: 182  PVIPSRGIRQGDPISPYLFLFCVEGLSKALSKAVSEEVIHGIKVTSTAPTISHLLFVDDS 361
               P RG+RQGDP+SPYLFL C EG S  LSK   E  +HGI++   AP++SHLLF DDS
Sbjct: 882  SFSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDS 941

Query: 362  FLFFKANTVETEAIKLILDNYANASGQCINYQKSGIFFSSNVRTDTQVEISSLLGVHNGL 541
             +  +AN  E + ++ IL  Y   SGQ IN  KS + FS N  +  +  + + L +    
Sbjct: 942  LILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRET 1001

Query: 542  QNSMYLGLPSLVGRSKKQVFGFIKERLWKRIQGWKAKKISRAGKTVLIKNVATAIPSYCM 721
             N  YLGLP  VGRS+ ++F ++KER+W+RIQGWK K +SRAGK +LIK VA AIP++ M
Sbjct: 1002 TNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAM 1061

Query: 722  SSFLLPRSLCNEMEVMMNKFWWQSGSSDRRGIKWVAWNGLSMSKCQGGLAFRNLYGYNVA 901
              F L + LC+++  M+ K+WW +   D + + W++WN L++ K  GGL FR++Y +N+A
Sbjct: 1062 GCFELTKDLCDQISKMIAKYWWSNQEKDNK-MHWLSWNKLTLPKNMGGLGFRDIYIFNLA 1120

Query: 902  LMAKHVWKFIKDPQSLLSRFYKAKYFPDIHVLQAKVSPGSSFIWQGIVNAKNEVAHGYRW 1081
            ++AK  W+ I+DP SL SR  +AKYFP     + K +   S+ W+ I      + +G  W
Sbjct: 1121 MLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIW 1180

Query: 1082 ILGDGASIKCIQDPWLARKEDFRVDQSREYIDRNLMVADLFLQTEREWDRDKVLNVFSPS 1261
             +GDG+ I    DPW+ R    R   +    +    V +L       WD D +   F   
Sbjct: 1181 RVGDGSKINIWADPWIPRGWS-RKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEE 1239

Query: 1262 DAAIILATNIPA-ISVVDHLAWDRTTNGRYSVKTGYQLWHD------RNIGVGSVTQSNG 1420
            D A I   +IP  + + D LAW     G ++VK+ Y++  +      RN   G     +G
Sbjct: 1240 DVAAI--KSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESG 1297

Query: 1421 ----WSKIWKADLPHKVKLFLWRFCRNNVPVKHRLNSKGVCIPLECPMCNSGIEDMVHVF 1588
                W K+WK  +P K+K FLWR C N + ++  L+ +G+ +   C MC    ED  H+F
Sbjct: 1298 DDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLF 1357

Query: 1589 FTCPFAVACWQYIGW-SVDISTEDYAPGW-LLQKLQTASSSEILLIAKVFWGIWFFRNKK 1762
            F C      WQ +    +    E    G  +LQ +     +E        W  W  R   
Sbjct: 1358 FKCKPVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPENERTSAIVCLWQWWKER--- 1414

Query: 1763 VWDNKSVTAAIAMEWSAKSILDWKEAKEKRVKMITTHPIRVQEPVKWDKPGVGTLKLNVD 1942
               N+     I    +  S L   +A E     +     R  E   W +P +  +K+N D
Sbjct: 1415 ---NEVREGGIPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGECAVWRRPPLNFVKINTD 1471

Query: 1943 AAIKLGDTSFAMGLVLRDHTGALVSGKTVCKXXXXXXXXXXXXXXXXGLHWLIEMDHDRV 2122
             A          G V++D TGA++                        +    E    R+
Sbjct: 1472 GAYSSNMKQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRI 1531

Query: 2123 VLESDSLSVVRALQSSETNLLEV-GLIIDACRLILDAKVNFSVSFVKRQANRVAHLVAKL 2299
             LE+DS+ +  A+Q +  NL  + G+I++   +IL    +FSVS+  R  N+VAH +A  
Sbjct: 1532 ELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFSVSYSPRSCNKVAHELAAY 1591

Query: 2300 PCSM 2311
             C++
Sbjct: 1592 GCNL 1595


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