BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022096
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containi...   369   e-100
ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containi...   345   5e-93
ref|XP_002338705.1| predicted protein [Populus trichocarpa] gi|2...   343   2e-92
ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containi...   321   1e-85
ref|NP_174603.1| pentatricopeptide repeat-containing protein [Ar...   313   2e-83

>ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Vitis vinifera]
          Length = 573

 Score =  369 bits (946), Expect = e-100
 Identities = 177/264 (67%), Positives = 215/264 (81%), Gaps = 8/264 (3%)
 Frame = -2

Query: 770 NIYLYSAMITAYASQPDHRSSFNLYRDMVRRAIPKPNHFIFPLVLRSCPVVLESYGTEML 591
           N+YLY+AMITAYAS  DH S+  LYR+MVRR  P PNHFI+P VL+SC  V+      M+
Sbjct: 118 NVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARMV 177

Query: 590 HTQILKLGFGEYPVVQTALVDSYSRFCSDLGIARQLFDEMTERNVVTWTAMVSGYTRVGE 411
           H Q+L+ GF +YPVVQTAL+D+Y RF SD+  AR LFDEMTERNVV+WTAM+SGYTR+G+
Sbjct: 178 HCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYTRLGQ 237

Query: 410 MGNAVLLFEKMPERDAPSWNAVIAGCTQNGLFSEAISLFRRMV--------QSNKPNQVS 255
           +GNAVLLFE+MPERD PSWNA+IAG TQNGLF EA+SLFRRM+        Q N+PNQV+
Sbjct: 238 IGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQVT 297

Query: 254 VVCTLSACGHGGMLQLGKCIHGYICRNNLGSDYYISNALIDMYGKCGSLVEAKTIFDKTS 75
            VC+LSACGH GML+LGK IHGY+ RN LG D ++SNAL+DMYGKCG L EA+ +FD+T 
Sbjct: 298 AVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTL 357

Query: 74  QRNLTSWNSMINCLALHGQSDSAV 3
           +R+LTSWNSMINCLALHGQS +A+
Sbjct: 358 ERSLTSWNSMINCLALHGQSQNAI 381



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 13/268 (4%)
 Frame = -2

Query: 770  NIYLYSAMITAYASQPDHRSSFNLYRDMVRRAIPKPNHFIFPLVLRSCPVVLESYGTEML 591
            N+  ++AMI+ Y       ++  L+ +M  R +P  N  I         +   S    M+
Sbjct: 221  NVVSWTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMI 280

Query: 590  HTQILKLGFGEYPVVQTALVDSYSRFCSDLGIAR-------QLFDEMTERNVVTWTAMVS 432
              +    G G  P   TA+    +  C   G+ R        ++      +     A+V 
Sbjct: 281  AVEAGAWGQGNRPNQVTAVCSLSA--CGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVD 338

Query: 431  GYTRVGEMGNAVLLFEKMPERDAPSWNAVIAGCTQNGLFSEAISLFRRMVQSN---KPNQ 261
             Y + G +  A  +F++  ER   SWN++I     +G    AIS+F  M+      KP++
Sbjct: 339  MYGKCGCLKEARRVFDRTLERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDE 398

Query: 260  VSVVCTLSACGHGGMLQLGKCIHGYICRNNLGSDYYISN--ALIDMYGKCGSLVEA-KTI 90
            V+ +  L+AC HGG+++ G  ++  +   N G +  I +   L+D+ G+ G   EA + +
Sbjct: 399  VTFIGLLNACTHGGLVEKG-WLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVV 457

Query: 89   FDKTSQRNLTSWNSMINCLALHGQSDSA 6
                 + +   W S++N   +HG +D A
Sbjct: 458  RGMRIEPDEVIWGSLLNGCKIHGHTDLA 485


>ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
           gi|449510706|ref|XP_004163739.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
          Length = 563

 Score =  345 bits (886), Expect = 5e-93
 Identities = 167/266 (62%), Positives = 206/266 (77%), Gaps = 10/266 (3%)
 Frame = -2

Query: 770 NIYLYSAMITAYASQPDHRSSFNLYRDMVRRAIPKPNHFIFPLVLRSCPVVLESYGTEML 591
           N++LY+AMITAYAS PD +++F LYR+MVRR   +PN+FI+P VLRSCP VL S  T+M+
Sbjct: 106 NVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMV 165

Query: 590 HTQILKLGFGEYPVVQTALVDSYSRFCSDLGIARQLFDEMTERNVVTWTAMVSGYTRVGE 411
           HTQ+LK GFG YPVVQTA+VDSYSRF SD+G ARQ+FDEM ER VV+WTAM+SGY R+G 
Sbjct: 166 HTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGN 225

Query: 410 MGNAVLLFEKMPERDAPSWNAVIAGCTQNGLFSEAISLFRRMV----------QSNKPNQ 261
             +A+ LFE MPERD P+WNA+IAGC QNG F EAI LF+RMV          + NKPN+
Sbjct: 226 FDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDRENKPNK 285

Query: 260 VSVVCTLSACGHGGMLQLGKCIHGYICRNNLGSDYYISNALIDMYGKCGSLVEAKTIFDK 81
            ++   LSACGH GML LGK IHGY+ +   G D +ISNAL+DMYGKCG+L  A+ +FD 
Sbjct: 286 TTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDM 345

Query: 80  TSQRNLTSWNSMINCLALHGQSDSAV 3
            + +NLTSWNS+INCLALHG S SA+
Sbjct: 346 ITLKNLTSWNSLINCLALHGHSGSAI 371



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 67/269 (24%), Positives = 112/269 (41%), Gaps = 18/269 (6%)
 Frame = -2

Query: 758 YSAMITAYASQPDHRSSFNLYRDMVRRAIP--------KPNHFIFPLVLRSCPVVLESYG 603
           ++A+I   A       +  L++ MV  A+         KPN       L +C      + 
Sbjct: 244 WNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDRENKPNKTTLGSALSACGHTGMLHL 303

Query: 602 TEMLHTQILKLGFGEYPVVQTALVDSYSRFCSDLGIARQLFDEMTERNVVTWTAMVSGYT 423
            + +H  + K   G+   +  AL+D Y + C +L +AR++FD +T +N+           
Sbjct: 304 GKWIHGYVFKTYPGQDSFISNALLDMYGK-CGNLKVARRVFDMITLKNLT---------- 352

Query: 422 RVGEMGNAVLLFEKMPERDAPSWNAVIAGCTQNGLFSEAISLFRRMVQSN---KPNQVSV 252
                                SWN++I     +G    AI LF  ++      KPN+V+ 
Sbjct: 353 ---------------------SWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTF 391

Query: 251 VCTLSACGHGGMLQLGKCIHGYICRNNLGSDYYIS------NALIDMYGKCGSLVEA-KT 93
           V  L+AC HGG+++      GY     +  DY I         LID+ G+ G   EA + 
Sbjct: 392 VGVLNACTHGGLVE-----KGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEV 446

Query: 92  IFDKTSQRNLTSWNSMINCLALHGQSDSA 6
           +     + +   W S++N   +HG+SD A
Sbjct: 447 VRGMNIEPDEVVWGSLLNACKIHGRSDLA 475


>ref|XP_002338705.1| predicted protein [Populus trichocarpa] gi|222873268|gb|EEF10399.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  343 bits (881), Expect = 2e-92
 Identities = 164/257 (63%), Positives = 206/257 (80%), Gaps = 8/257 (3%)
 Frame = -2

Query: 749 MITAYASQPDHRSSFNLYRDMVRRAIPKPNHFIFPLVLRSCPVVLESYGTEMLHTQILKL 570
           M+TAYAS  DH+SSF+L+R M+RR  PKPNHF+FP VL+ C V      T+ +H QI KL
Sbjct: 1   MVTAYASIQDHQSSFDLFRFMLRRGHPKPNHFLFPHVLKYCQV------TKFVHAQIEKL 54

Query: 569 GFGEYPVVQTALVDSYSRFCSDLGIARQLFDEMTERNVVTWTAMVSGYTRVGEMGNAVLL 390
           GFG+YPVVQTAL+DSYSR   D+GIAR++FDEM+ERNVV+WTAM+SGYTR+GE+ NA+ L
Sbjct: 55  GFGQYPVVQTALIDSYSRSGYDIGIARRMFDEMSERNVVSWTAMISGYTRLGEIENAITL 114

Query: 389 FEKMPERDAPSWNAVIAGCTQNGLFSEAISLFRRMV--------QSNKPNQVSVVCTLSA 234
           F++MPERD PSWNAVI+GC QNGLF+ AI++F++MV        +  +PNQ +VVC LSA
Sbjct: 115 FDEMPERDVPSWNAVISGCAQNGLFTRAITIFKKMVGLSLEVQHRDMRPNQTTVVCALSA 174

Query: 233 CGHGGMLQLGKCIHGYICRNNLGSDYYISNALIDMYGKCGSLVEAKTIFDKTSQRNLTSW 54
           CGH GML +GK IHGY+ RN   SD ++ NAL+DMYGKCG L EAK +FD TS+++LTSW
Sbjct: 175 CGHTGMLHVGKWIHGYVYRNMRSSDSFVLNALVDMYGKCGCLKEAKKVFDATSKKSLTSW 234

Query: 53  NSMINCLALHGQSDSAV 3
           NSMINCLALHGQS+ A+
Sbjct: 235 NSMINCLALHGQSERAI 251


>ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Glycine max]
          Length = 522

 Score =  321 bits (823), Expect = 1e-85
 Identities = 156/258 (60%), Positives = 203/258 (78%), Gaps = 2/258 (0%)
 Frame = -2

Query: 770 NIYLYSAMITAYASQP-DHRSSFNLYRDMVRRAIPKPNHFIFPLVLRSCPVVLESYGTEM 594
           N +L++AMITAYA+ P  H S+ +L+R M+R   P+PNHFIFP  L++CP   ES   E 
Sbjct: 69  NTHLFTAMITAYAAHPATHPSALSLFRHMLRSQPPRPNHFIFPHALKTCP---ESCAAES 125

Query: 593 LHTQILKLGFGEYPVVQTALVDSYSRFCSDLGIARQLFDEMTERNVVTWTAMVSGYTRVG 414
           LH QI+K GF EYPVVQTALVDSYS+    LG A+++FDEM++R+VV++TAMVSG+ RVG
Sbjct: 126 LHAQIVKSGFHEYPVVQTALVDSYSKVSGGLGNAKKVFDEMSDRSVVSFTAMVSGFARVG 185

Query: 413 EMGNAVLLFEKMPERDAPSWNAVIAGCTQNGLFSEAISLFRRMV-QSNKPNQVSVVCTLS 237
           ++ +AV +F +M +RD PSWNA+IAGCTQNG F++ I LFRRMV + N+PN V+VVC LS
Sbjct: 186 DVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECNRPNGVTVVCALS 245

Query: 236 ACGHGGMLQLGKCIHGYICRNNLGSDYYISNALIDMYGKCGSLVEAKTIFDKTSQRNLTS 57
           ACGH GMLQLG+ IHGY+ +N L  D ++ NAL+DMYGKCGSL +A+ +F+   ++ LTS
Sbjct: 246 ACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKVFEMNPEKGLTS 305

Query: 56  WNSMINCLALHGQSDSAV 3
           WNSMINC ALHGQSDSA+
Sbjct: 306 WNSMINCFALHGQSDSAI 323



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 12/267 (4%)
 Frame = -2

Query: 770 NIYLYSAMITAYASQPDHRSSFNLYRDMVRRAIPKPNHFIFPLVLRSCPVVLESYGTEML 591
           ++  ++AM++ +A   D  S+  ++ +M+ R +P  N  I             + G E+ 
Sbjct: 170 SVVSFTAMVSGFARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGA----FTQGIELF 225

Query: 590 HTQILKLGFGEYPVVQTALVDSYSRFCSDLG--IARQLFDEMTERNVVTWTAMVSGYTRV 417
              + +        V  AL          LG  I   ++      +     A+V  Y + 
Sbjct: 226 RRMVFECNRPNGVTVVCALSACGHMGMLQLGRWIHGYVYKNGLAFDSFVLNALVDMYGKC 285

Query: 416 GEMGNAVLLFEKMPERDAPSWNAVIAGCTQNGLFSEAISLFRRMVQSN---KPNQVSVVC 246
           G +G A  +FE  PE+   SWN++I     +G    AI++F +MV+     +P++V+ V 
Sbjct: 286 GSLGKARKVFEMNPEKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVG 345

Query: 245 TLSACGHGGMLQLGKCIHGYICRNNLGSDYYIS------NALIDMYGKCGSLVEAKTIFD 84
            L+AC HGG+++      GY     +  +Y I         LID+ G+ G   EA  +  
Sbjct: 346 LLNACTHGGLVE-----KGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVK 400

Query: 83  KTS-QRNLTSWNSMINCLALHGQSDSA 6
             S + +   W S++N   +HG++D A
Sbjct: 401 GMSMEPDEVVWGSLLNGCKVHGRTDLA 427


>ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g33350 gi|12322383|gb|AAG51215.1|AC051630_12 unknown
           protein; 15445-13829 [Arabidopsis thaliana]
           gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein,
           putative [Arabidopsis thaliana]
           gi|332193465|gb|AEE31586.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 538

 Score =  313 bits (803), Expect = 2e-83
 Identities = 150/260 (57%), Positives = 201/260 (77%), Gaps = 4/260 (1%)
 Frame = -2

Query: 770 NIYLYSAMITAYASQ-PDHRSS-FNLYRDMVRRAIPKPNHFIFPLVLRSCPVVLESYGTE 597
           N +LY+A++TAY+S  P H SS F+ +R MV R++P+PNHFI+PLVL+S P +  ++ T 
Sbjct: 87  NTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTP 146

Query: 596 MLHTQILKLGFGEYPVVQTALVDSYSRFCSDLGIARQLFDEMTERNVVTWTAMVSGYTRV 417
           ++HT + K GF  Y VVQTAL+ SY+   S + +ARQLFDEM+ERNVV+WTAM+SGY R 
Sbjct: 147 LVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARS 206

Query: 416 GEMGNAVLLFEKMPERDAPSWNAVIAGCTQNGLFSEAISLFRRMVQ--SNKPNQVSVVCT 243
           G++ NAV LFE MPERD PSWNA++A CTQNGLF EA+SLFRRM+   S +PN+V+VVC 
Sbjct: 207 GDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCV 266

Query: 242 LSACGHGGMLQLGKCIHGYICRNNLGSDYYISNALIDMYGKCGSLVEAKTIFDKTSQRNL 63
           LSAC   G LQL K IH +  R +L SD ++SN+L+D+YGKCG+L EA ++F   S+++L
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSL 326

Query: 62  TSWNSMINCLALHGQSDSAV 3
           T+WNSMINC ALHG+S+ A+
Sbjct: 327 TAWNSMINCFALHGRSEEAI 346



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 9/264 (3%)
 Frame = -2

Query: 770 NIYLYSAMITAYASQPDHRSSFNLYRDMVRRAIPKPNHFIFPLVLRSCPVVLESYGTEML 591
           N+  ++AM++ YA   D  ++  L+ DM  R +P  N  +         +   S    M+
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251

Query: 590 HTQILKLGFGEYPVVQTALVDSYSRFCSDLGIARQLFDEMTERNVVTWTAMVSGYTRVGE 411
           +   ++        V +A   + +   +  GI    +      +V    ++V  Y + G 
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAK-GIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310

Query: 410 MGNAVLLFEKMPERDAPSWNAVIAGCTQNGLFSEAISLFRRMVQSN----KPNQVSVVCT 243
           +  A  +F+   ++   +WN++I     +G   EAI++F  M++ N    KP+ ++ +  
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370

Query: 242 LSACGHGGMLQLGKCIHGY--ICRNNLGSDYYISN--ALIDMYGKCGSLVEAKTIFDKTS 75
           L+AC HGG++  G+   GY  +  N  G +  I +   LID+ G+ G   EA  +     
Sbjct: 371 LNACTHGGLVSKGR---GYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMK 427

Query: 74  QR-NLTSWNSMINCLALHGQSDSA 6
            + +   W S++N   +HG  D A
Sbjct: 428 MKADEAIWGSLLNACKIHGHLDLA 451