BLASTX nr result

ID: Bupleurum21_contig00022093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022093
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269801.1| PREDICTED: uncharacterized protein C12orf26 ...   200   9e-50
ref|XP_002529955.1| protein with unknown function [Ricinus commu...   198   4e-49
ref|XP_002310689.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|NP_173110.2| uncharacterized protein [Arabidopsis thaliana] ...   191   8e-47
ref|XP_002890179.1| hypothetical protein ARALYDRAFT_889058 [Arab...   191   8e-47

>ref|XP_002269801.1| PREDICTED: uncharacterized protein C12orf26 homolog [Vitis
           vinifera] gi|296082802|emb|CBI21807.3| unnamed protein
           product [Vitis vinifera]
          Length = 546

 Score =  200 bits (509), Expect = 9e-50
 Identities = 103/180 (57%), Positives = 129/180 (71%), Gaps = 3/180 (1%)
 Frame = +3

Query: 3   SESKAFKVPKTITCHVLSTGTLKELSNSITGSDDAEESDMPHNSFRESSH-GLCRGDITS 179
           S S++  VPKT+TC V+S   LK +++ +   DD +       S  + SH GL +  + S
Sbjct: 204 SGSRSLNVPKTVTCRVMSADMLKAVNDMLLSEDDVQCPQQIGQSISQPSHPGLDKRRLPS 263

Query: 180 PSG-SNDCSLILAGLHACGDLSVTMLRTFLECKEVKAVISIGCCYNLLSADR-DQIGDEC 353
                N+ S +LAGLHACGDLSVTMLRTFLECKEVKAV+SIGCCYNLLS +  +    +C
Sbjct: 264 LCDVHNESSFVLAGLHACGDLSVTMLRTFLECKEVKAVVSIGCCYNLLSEEVCESSSSQC 323

Query: 354 GFPLSKGVTSSALLLGRNARDLACQSAERWRGLGKDVGLHNFELHAFRAAFQMVLCQYYP 533
           GFP+S  + S+ L LG+++RDLACQSAERWR +GKD GL NFELHAFRAAFQMVL +YYP
Sbjct: 324 GFPMSNVIKSAGLSLGKSSRDLACQSAERWRVMGKDAGLQNFELHAFRAAFQMVLYRYYP 383


>ref|XP_002529955.1| protein with unknown function [Ricinus communis]
           gi|223530553|gb|EEF32432.1| protein with unknown
           function [Ricinus communis]
          Length = 538

 Score =  198 bits (504), Expect = 4e-49
 Identities = 99/171 (57%), Positives = 117/171 (68%), Gaps = 1/171 (0%)
 Frame = +3

Query: 24  VPKTITCHVLSTGTLKELSNSITGSDDAEESDMPHNSFRESSHGLCRGDITSPSGSNDCS 203
           VPKTITC ++S   LK L+N     D+ E+  +                 T     +  S
Sbjct: 205 VPKTITCRIMSNDMLKALTNMSVNVDEVEQPKL-----------------TKQDSDDKTS 247

Query: 204 LILAGLHACGDLSVTMLRTFLECKEVKAVISIGCCYNLLSAD-RDQIGDECGFPLSKGVT 380
            +LAGLHACGDLSVTML+TFLECKEVKAV+SIGCCYNLLS +  D     CGFP+S GV 
Sbjct: 248 FVLAGLHACGDLSVTMLKTFLECKEVKAVVSIGCCYNLLSEECLDAADSHCGFPMSSGVK 307

Query: 381 SSALLLGRNARDLACQSAERWRGLGKDVGLHNFELHAFRAAFQMVLCQYYP 533
           S+ + LG+N+RDLACQSA+RWR L KDVGL NFELHAFRA FQMVLC+YYP
Sbjct: 308 SAGISLGKNSRDLACQSADRWRSLDKDVGLQNFELHAFRAVFQMVLCRYYP 358


>ref|XP_002310689.1| predicted protein [Populus trichocarpa] gi|222853592|gb|EEE91139.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  196 bits (498), Expect = 2e-48
 Identities = 100/171 (58%), Positives = 121/171 (70%), Gaps = 1/171 (0%)
 Frame = +3

Query: 24  VPKTITCHVLSTGTLKELSNSITGSDDAEESDMPHNSFRESSHGLCRGDITSPSGSNDCS 203
           VPKTITCHV+S   LK L++     D+ +                 R ++      +  S
Sbjct: 210 VPKTITCHVMSIDMLKALTSMSPHIDNVK-----------------RPELIGQVADDKTS 252

Query: 204 LILAGLHACGDLSVTMLRTFLECKEVKAVISIGCCYNLLSAD-RDQIGDECGFPLSKGVT 380
           L+LAGLHACGDLSVTML+TFLECK+VKAV+SIGCCYNLLS    D  G +CGFP+S GV 
Sbjct: 253 LVLAGLHACGDLSVTMLKTFLECKDVKAVVSIGCCYNLLSEGCLDIAGSQCGFPVSCGVK 312

Query: 381 SSALLLGRNARDLACQSAERWRGLGKDVGLHNFELHAFRAAFQMVLCQYYP 533
           S+ + LG+++RDLACQSAERWR L +D GLHNFELHAFRAAFQMVLC+YYP
Sbjct: 313 SAGISLGKSSRDLACQSAERWRSLEQDAGLHNFELHAFRAAFQMVLCKYYP 363


>ref|NP_173110.2| uncharacterized protein [Arabidopsis thaliana]
           gi|190016010|gb|ACE62893.1| At1g16650 [Arabidopsis
           thaliana] gi|332191359|gb|AEE29480.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 521

 Score =  191 bits (484), Expect = 8e-47
 Identities = 99/178 (55%), Positives = 122/178 (68%), Gaps = 1/178 (0%)
 Frame = +3

Query: 3   SESKAFKVPKTITCHVLSTGTLKELSNSITGSDDAEESDMPHNSFRESSHGLCRGDITSP 182
           S +K   VP TITC VLST  LK L++     D+ + S    N   +S         +S 
Sbjct: 201 SGNKCPDVPMTITCRVLSTEMLKALTDVHLEKDETDSSGSALNEEGQSRSQ------SSS 254

Query: 183 SGSNDCSLILAGLHACGDLSVTMLRTFLECKEVKAVISIGCCYNLLSADRDQIG-DECGF 359
             +  CSL+LAGLHACGDLSVTMLRTF+EC+EVKA++SIGCCYNLLS    +    +CG+
Sbjct: 255 DANRSCSLVLAGLHACGDLSVTMLRTFMECEEVKALVSIGCCYNLLSEKSSEDSCSKCGY 314

Query: 360 PLSKGVTSSALLLGRNARDLACQSAERWRGLGKDVGLHNFELHAFRAAFQMVLCQYYP 533
           P+S G+ S    LG+NARDLACQSAERW  LG+D GL NFELH+FRAAFQMVL ++YP
Sbjct: 315 PMSAGLRSLGFSLGKNARDLACQSAERWSSLGEDAGLQNFELHSFRAAFQMVLSKHYP 372


>ref|XP_002890179.1| hypothetical protein ARALYDRAFT_889058 [Arabidopsis lyrata subsp.
           lyrata] gi|297336021|gb|EFH66438.1| hypothetical protein
           ARALYDRAFT_889058 [Arabidopsis lyrata subsp. lyrata]
          Length = 520

 Score =  191 bits (484), Expect = 8e-47
 Identities = 104/181 (57%), Positives = 124/181 (68%), Gaps = 4/181 (2%)
 Frame = +3

Query: 3   SESKAFKVPKTITCHVLSTGTLKELSNSITGSDDAEESDMPHNSFRESSHGLCRGDITSP 182
           S +K   VP TITC VLS+  LK L+N        E+SD   N        L  G   S 
Sbjct: 201 SGNKCPDVPMTITCRVLSSEMLKALTNV-----PLEKSDTDFNG-----SALNEGQSRSQ 250

Query: 183 SGSND---CSLILAGLHACGDLSVTMLRTFLECKEVKAVISIGCCYNLLSA-DRDQIGDE 350
           S S+    CSL+LAGLHACGDLSVTMLRTF+EC+EVKAV+S+GCCYNLLS    D    +
Sbjct: 251 SASDANRLCSLVLAGLHACGDLSVTMLRTFMECEEVKAVVSVGCCYNLLSEKSSDDSCSK 310

Query: 351 CGFPLSKGVTSSALLLGRNARDLACQSAERWRGLGKDVGLHNFELHAFRAAFQMVLCQYY 530
           CG+P+S G+ S    LG+NARDLACQSAERW GLG+D GL NF+LH+FRAAFQMVL ++Y
Sbjct: 311 CGYPMSAGLKSLGFSLGKNARDLACQSAERWSGLGEDAGLQNFQLHSFRAAFQMVLSKHY 370

Query: 531 P 533
           P
Sbjct: 371 P 371


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