BLASTX nr result

ID: Bupleurum21_contig00022076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022076
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524175.1| conserved hypothetical protein [Ricinus comm...   122   4e-26
gb|AFK47881.1| unknown [Medicago truncatula]                          119   3e-25
ref|XP_003605892.1| Transmembrane protein [Medicago truncatula] ...   116   2e-24
ref|XP_002313041.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_003527488.1| PREDICTED: uncharacterized protein LOC100790...   112   2e-23

>ref|XP_002524175.1| conserved hypothetical protein [Ricinus communis]
           gi|223536544|gb|EEF38190.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score =  122 bits (305), Expect = 4e-26
 Identities = 53/103 (51%), Positives = 70/103 (67%)
 Frame = -1

Query: 314 MGGVTKXXXXXXXXXXXXXXXXXXXIDAQLCLPRHLFPDVVVDFKTWYTTQYDDYLINEK 135
           MG +TK                   IDAQ CLP +LFPD+++D K WY+ +Y DYL++EK
Sbjct: 1   MGAITKLIDAILFLFFVVIAVAAPLIDAQTCLPLNLFPDMLIDLKKWYSNEYGDYLVSEK 60

Query: 134 PHFFVGLVWLELLFQWPLSIASLYGILTGKSWFKTVSLMFGSS 6
           PHFFVG+VW+ELLFQWPL++ +LYGIL  K WF T  L++G+S
Sbjct: 61  PHFFVGVVWIELLFQWPLALFNLYGILASKPWFNTTCLIYGAS 103


>gb|AFK47881.1| unknown [Medicago truncatula]
          Length = 167

 Score =  119 bits (298), Expect = 3e-25
 Identities = 49/77 (63%), Positives = 62/77 (80%)
 Frame = -1

Query: 236 DAQLCLPRHLFPDVVVDFKTWYTTQYDDYLINEKPHFFVGLVWLELLFQWPLSIASLYGI 57
           DAQ CLP   FP+++V+ KTWYT +YDDYL+ EKPHFFVGLVWLELLFQWPL++ ++Y I
Sbjct: 27  DAQTCLPLSYFPEILVNVKTWYTNEYDDYLVAEKPHFFVGLVWLELLFQWPLAVLNVYAI 86

Query: 56  LTGKSWFKTVSLMFGSS 6
           L+ K WF T  L++G S
Sbjct: 87  LSSKGWFNTTCLIYGVS 103


>ref|XP_003605892.1| Transmembrane protein [Medicago truncatula]
           gi|355506947|gb|AES88089.1| Transmembrane protein
           [Medicago truncatula]
          Length = 167

 Score =  116 bits (291), Expect = 2e-24
 Identities = 48/77 (62%), Positives = 61/77 (79%)
 Frame = -1

Query: 236 DAQLCLPRHLFPDVVVDFKTWYTTQYDDYLINEKPHFFVGLVWLELLFQWPLSIASLYGI 57
           DAQ CLP   FP+++V+ KTWYT +Y DYL+ EKPHFFVGLVWLELLFQWPL++ ++Y I
Sbjct: 27  DAQTCLPLSYFPEILVNVKTWYTNEYGDYLVAEKPHFFVGLVWLELLFQWPLAVLNVYAI 86

Query: 56  LTGKSWFKTVSLMFGSS 6
           L+ K WF T  L++G S
Sbjct: 87  LSSKGWFNTTCLIYGVS 103


>ref|XP_002313041.1| predicted protein [Populus trichocarpa] gi|222849449|gb|EEE86996.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score =  114 bits (284), Expect = 1e-23
 Identities = 50/77 (64%), Positives = 57/77 (74%)
 Frame = -1

Query: 236 DAQLCLPRHLFPDVVVDFKTWYTTQYDDYLINEKPHFFVGLVWLELLFQWPLSIASLYGI 57
           DAQ CLP   FPD +++ K WY   Y DYLI EKPHFFVGLVWLELLFQWPLS+ +LY  
Sbjct: 19  DAQTCLPLTFFPDFLINLKQWYGHHYGDYLIIEKPHFFVGLVWLELLFQWPLSLLNLYAF 78

Query: 56  LTGKSWFKTVSLMFGSS 6
           L  KSWF T  L++GSS
Sbjct: 79  LASKSWFNTTCLIYGSS 95


>ref|XP_003527488.1| PREDICTED: uncharacterized protein LOC100790628 [Glycine max]
          Length = 168

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/77 (64%), Positives = 57/77 (74%)
 Frame = -1

Query: 236 DAQLCLPRHLFPDVVVDFKTWYTTQYDDYLINEKPHFFVGLVWLELLFQWPLSIASLYGI 57
           DAQ CLP   FPD++V  K  YT  Y DYL+ EKPHFFVGLVWLELLFQWPL++ SLY I
Sbjct: 28  DAQTCLPLSYFPDILVQLKEHYTKDYGDYLVAEKPHFFVGLVWLELLFQWPLALLSLYAI 87

Query: 56  LTGKSWFKTVSLMFGSS 6
           LT K WF T  L++G S
Sbjct: 88  LTSKPWFNTTCLIYGVS 104


Top