BLASTX nr result

ID: Bupleurum21_contig00022062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022062
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29961.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation...    68   9e-10
emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera]    68   9e-10
ref|XP_002301950.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation...    63   2e-08

>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/79 (50%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
 Frame = +1

Query: 70  MESKFWN-QGXXXXXXXXXXXXXXXXXXXXXXXNVTTAGSRYLQGNGSESDDPD-PKRVI 243
           M S+FW  QG                       +   AGSRYLQ N S+SDD D  KRV+
Sbjct: 1   MSSRFWTAQGDSDTEEEESDYEDGVERGGAAGESAPHAGSRYLQANASDSDDSDGQKRVV 60

Query: 244 RSAKDKRFEEMAATVDQMK 300
           RSAKDKRFEEM+ATVDQMK
Sbjct: 61  RSAKDKRFEEMSATVDQMK 79


>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Vitis vinifera]
          Length = 946

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/79 (50%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
 Frame = +1

Query: 70  MESKFWN-QGXXXXXXXXXXXXXXXXXXXXXXXNVTTAGSRYLQGNGSESDDPD-PKRVI 243
           M S+FW  QG                       +   AGSRYLQ N S+SDD D  KRV+
Sbjct: 1   MSSRFWTAQGDSDTEEEESDYEDGVERGGAAGESAPHAGSRYLQANASDSDDSDGQKRVV 60

Query: 244 RSAKDKRFEEMAATVDQMK 300
           RSAKDKRFEEM+ATVDQMK
Sbjct: 61  RSAKDKRFEEMSATVDQMK 79


>emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera]
          Length = 1047

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/79 (50%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
 Frame = +1

Query: 70  MESKFWN-QGXXXXXXXXXXXXXXXXXXXXXXXNVTTAGSRYLQGNGSESDDPD-PKRVI 243
           M S+FW  QG                       +   AGSRYLQ N S+SDD D  KRV+
Sbjct: 1   MSSRFWTAQGDSDTEEEESDYEDGVERGGAAGESAPHAGSRYLQANASDSDDSDGQKRVV 60

Query: 244 RSAKDKRFEEMAATVDQMK 300
           RSAKDKRFEEM+ATVDQMK
Sbjct: 61  RSAKDKRFEEMSATVDQMK 79


>ref|XP_002301950.1| predicted protein [Populus trichocarpa] gi|222843676|gb|EEE81223.1|
           predicted protein [Populus trichocarpa]
          Length = 910

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = +1

Query: 70  MESKFWNQGXXXXXXXXXXXXXXXXXXXXXXXNVTTAGSRYLQGNGSESDDPDP-KRVIR 246
           M S+FW QG                          T  ++YL+GN S+SD+ D  KRV+R
Sbjct: 1   MASRFWTQGDSESDEESDYGDEVEDGEAGESTAPATVDNKYLRGNASDSDESDDQKRVVR 60

Query: 247 SAKDKRFEEMAATVDQMK 300
           SAKDKRFEEM+ATVDQMK
Sbjct: 61  SAKDKRFEEMSATVDQMK 78


>ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Glycine max]
          Length = 926

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/78 (48%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
 Frame = +1

Query: 70  MESKFWNQGXXXXXXXXXXXXXXXXXXXXXXXNVTTAGSRYLQGNGSESDDPD-PKRVIR 246
           M S+FW QG                             SRYLQ N S+SDD D  KRV+R
Sbjct: 1   MASRFWTQGGSDSEEEESDYDEEVDTTVGEASGQAVT-SRYLQDNASDSDDSDGQKRVVR 59

Query: 247 SAKDKRFEEMAATVDQMK 300
           SAKDKRFEEMA+TVDQMK
Sbjct: 60  SAKDKRFEEMASTVDQMK 77


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