BLASTX nr result

ID: Bupleurum21_contig00022057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022057
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323183.1| f-box family protein [Populus trichocarpa] g...   200   4e-49
ref|XP_002265242.1| PREDICTED: uncharacterized protein LOC100258...   197   3e-48
ref|XP_002264057.2| PREDICTED: F-box/LRR-repeat protein At3g4888...   186   6e-45
ref|XP_003634621.1| PREDICTED: uncharacterized protein LOC100854...   185   1e-44
emb|CAN63731.1| hypothetical protein VITISV_019890 [Vitis vinifera]   185   1e-44

>ref|XP_002323183.1| f-box family protein [Populus trichocarpa]
           gi|222867813|gb|EEF04944.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score =  200 bits (509), Expect = 4e-49
 Identities = 108/252 (42%), Positives = 153/252 (60%), Gaps = 3/252 (1%)
 Frame = +1

Query: 121 DMTTDCLVNIFARLGVESRLLDIPLVCKSWYMAVYNPLSWKRIVFPTSIDYSR---LWGS 291
           D+   CLVN+  R+G+ES LLD+P VCKSWY A  +P  WK +VFP  +D  R   L   
Sbjct: 46  DLECHCLVNVLGRVGMESLLLDVPFVCKSWYKASLDPSCWKHLVFPKDLDSERDFTLLDR 105

Query: 292 FKICTKTKQIFEFKLIKFAVDQSEGCAISLVLPDNISSDDLIYVSEECPALKMLALPASV 471
           FK   K +        KF V +S G    L LP+  + +   YV++ECPAL  L LP+ +
Sbjct: 106 FKEKYKIENCSVDAFTKFVVGRSHGNCTGLFLPNGCTEEVAKYVADECPALTALLLPSDI 165

Query: 472 CDDNSETISEVIANLKNLEFLSLGCSFHIAEIAEIICNNLPNFMGLRVTGGHIDDEIASA 651
               S  +  +I   ++LE L LG S ++  I   I      F GL V+   I +E ASA
Sbjct: 166 LRCESSIVPTLIGKWEHLENLWLGSSENLVNIITQISLACNKFSGLCVSSATIQEEEASA 225

Query: 652 IASHLPNIKYLVLRNIDIKKKNLLVILKGCKQLVKLDIRNCIGFDEYDQEILKLSSAIKN 831
           I ++LPNIKYL+LR   I  ++L++IL+GCK LV LD+R+C+GFD  D+++L+L+S IK 
Sbjct: 226 IVTNLPNIKYLILRGAWIDFEDLVIILQGCKNLVHLDVRDCLGFDFDDEKVLELASNIKT 285

Query: 832 FRCEGSMVEEYE 867
           F+CEGSM+ +Y+
Sbjct: 286 FKCEGSMLVDYD 297


>ref|XP_002265242.1| PREDICTED: uncharacterized protein LOC100258440 [Vitis vinifera]
          Length = 446

 Score =  197 bits (502), Expect = 3e-48
 Identities = 105/264 (39%), Positives = 164/264 (62%), Gaps = 3/264 (1%)
 Frame = +1

Query: 121 DMTTDCLVNIFARLGVESRLLDIPLVCKSWYMAVYNPLSWKRIVFPTSIDYSRLWGSFKI 300
           ++  DCLVN+F ++G+ES LLD+PLVCKSW+ A  +P  W+ ++FP  I+   +WG    
Sbjct: 171 ELNRDCLVNVFQKVGMESMLLDVPLVCKSWHKASLDPKCWEFLIFPEYIEPDDIWGRGPF 230

Query: 301 CTKTKQIFEFKL---IKFAVDQSEGCAISLVLPDNISSDDLIYVSEECPALKMLALPASV 471
             +    F+F +   IKF +D+S G A +L LP   + +   Y + +CP L++L L A +
Sbjct: 231 AERFMLEFQFSVTAFIKFVIDRSCGHATALSLPICCTEEAFKYAANKCPKLELLGLNAGL 290

Query: 472 CDDNSETISEVIANLKNLEFLSLGCSFHIAEIAEIICNNLPNFMGLRVTGGHIDDEIASA 651
              +S  I ++I+  KNL+ L LG S  + EI   I     NF  L     ++ ++ ASA
Sbjct: 291 LHKHSSIIPKLISKWKNLQSLVLGSSHGMEEILTPIRLFCRNFTRLSAPKTNVGNKEASA 350

Query: 652 IASHLPNIKYLVLRNIDIKKKNLLVILKGCKQLVKLDIRNCIGFDEYDQEILKLSSAIKN 831
           I + LPN++YLVL    I++++L++IL+GCKQL+++D+R+C GFDE D EILKL+S I +
Sbjct: 351 IVTSLPNLRYLVLNGASIEQESLVMILQGCKQLIEIDVRDCDGFDEDDAEILKLASHIPS 410

Query: 832 FRCEGSMVEEYETDDYDIVSVSSN 903
           F C+GS + +   DDY+   +  N
Sbjct: 411 FMCKGSYLYD-PFDDYEHTQIDHN 433


>ref|XP_002264057.2| PREDICTED: F-box/LRR-repeat protein At3g48880 [Vitis vinifera]
          Length = 277

 Score =  186 bits (473), Expect = 6e-45
 Identities = 105/270 (38%), Positives = 159/270 (58%), Gaps = 5/270 (1%)
 Frame = +1

Query: 121 DMTTDCLVNIFARLGVESRLLDIPLVCKSWYMAVYNPLSWKRIVFPTSIDYSRLWGSFKI 300
           ++  DCLVN+F  +G+ES LLD+P VCKSWY A  +P  W+ ++FP  I   R+W +  +
Sbjct: 8   ELNMDCLVNVFRSVGMESLLLDVPFVCKSWYKASLDPKCWECLIFPKYIKPDRIWDNSPL 67

Query: 301 CTKTKQIFEFKL-----IKFAVDQSEGCAISLVLPDNISSDDLIYVSEECPALKMLALPA 465
             +    ++        IK  V +S+  A  L LP   + + L Y + E P+LK L L  
Sbjct: 68  GERLMMEYQESFCVTAFIKSVVARSQRRATVLTLPICCTEEALEYAANESPSLKDLRLHG 127

Query: 466 SVCDDNSETISEVIANLKNLEFLSLGCSFHIAEIAEIICNNLPNFMGLRVTGGHIDDEIA 645
            +    S  I ++I+  KNLE +SLG   ++ EI   I  +  NF+ L     ++  + A
Sbjct: 128 DLLFKKSTIIPKLISKWKNLEMMSLGSRHNMEEILVQISLHCNNFIMLFAPHIYVGKDEA 187

Query: 646 SAIASHLPNIKYLVLRNIDIKKKNLLVILKGCKQLVKLDIRNCIGFDEYDQEILKLSSAI 825
           +AI + LPN+KYLVL+   I+ +NL+++L+GCK+L+ LD+R CIGF+E D EIL L+S I
Sbjct: 188 TAIVTSLPNLKYLVLKGSTIEWENLVMVLQGCKKLLGLDVRKCIGFEEDDAEILALASHI 247

Query: 826 KNFRCEGSMVEEYETDDYDIVSVSSNEYYA 915
             F CEGS+ EEY+T   D+      +YY+
Sbjct: 248 PTFMCEGSIYEEYDT-YLDLDGDVDTDYYS 276


>ref|XP_003634621.1| PREDICTED: uncharacterized protein LOC100854143 [Vitis vinifera]
          Length = 462

 Score =  185 bits (470), Expect = 1e-44
 Identities = 102/248 (41%), Positives = 147/248 (59%), Gaps = 5/248 (2%)
 Frame = +1

Query: 121 DMTTDCLVNIFARLGVESRLLDIPLVCKSWYMAVYNPLSWKRIVFPTSIDYSRLWGSFKI 300
           D+  DCLVN+F ++G+ES LLD+P VCKSW+ A  +P  W+ ++FP  I   ++W + + 
Sbjct: 199 DLNMDCLVNVFHKVGIESLLLDVPRVCKSWHKASLDPKCWESLIFPEDIR-CKIWDNGRF 257

Query: 301 CTKTKQIFEFKL-----IKFAVDQSEGCAISLVLPDNISSDDLIYVSEECPALKMLALPA 465
             +    ++        IKF +D+S G A +L LP   + + L Y + ECP LK L L A
Sbjct: 258 SKRLMMEYQENFSSTAFIKFVIDRSRGRATALGLPGCCTEEALEYAANECPELKTLKLNA 317

Query: 466 SVCDDNSETISEVIANLKNLEFLSLGCSFHIAEIAEIICNNLPNFMGLRVTGGHIDDEIA 645
            + +     I  +I   KNLE L L     +  I   I  +  NFM L   G ++    A
Sbjct: 318 DLPNKQRRIIPRLIPKWKNLEVLVLDRRHRMRGILAQIALHCNNFMRLSAPGINVGYWEA 377

Query: 646 SAIASHLPNIKYLVLRNIDIKKKNLLVILKGCKQLVKLDIRNCIGFDEYDQEILKLSSAI 825
           SAI + LPN++YLVL+   I++K +++IL+GCKQLV LD+R C GFDE D EIL+L+S I
Sbjct: 378 SAIVTLLPNLRYLVLKGATIRQKRVVMILQGCKQLVHLDVRGCTGFDEDDAEILELASHI 437

Query: 826 KNFRCEGS 849
            +F CEGS
Sbjct: 438 PSFMCEGS 445


>emb|CAN63731.1| hypothetical protein VITISV_019890 [Vitis vinifera]
          Length = 462

 Score =  185 bits (470), Expect = 1e-44
 Identities = 102/248 (41%), Positives = 147/248 (59%), Gaps = 5/248 (2%)
 Frame = +1

Query: 121 DMTTDCLVNIFARLGVESRLLDIPLVCKSWYMAVYNPLSWKRIVFPTSIDYSRLWGSFKI 300
           D+  DCLVN+F ++G+ES LLD+P VCKSW+ A  +P  W+ ++FP  I   ++W + + 
Sbjct: 199 DLNMDCLVNVFHKVGIESLLLDVPRVCKSWHKASLDPKCWESLIFPEDIR-CKIWDNGRF 257

Query: 301 CTKTKQIFEFKL-----IKFAVDQSEGCAISLVLPDNISSDDLIYVSEECPALKMLALPA 465
             +    ++        IKF +D+S G A +L LP   + + L Y + ECP LK L L A
Sbjct: 258 SKRLMMEYQENFSSTAFIKFVIDRSRGRATALGLPGCCTEEALEYAANECPELKTLKLNA 317

Query: 466 SVCDDNSETISEVIANLKNLEFLSLGCSFHIAEIAEIICNNLPNFMGLRVTGGHIDDEIA 645
            + +     I  +I   KNLE L L     +  I   I  +  NFM L   G ++    A
Sbjct: 318 DLPNKQRRIIPRLIPKWKNLEVLVLDRRHRMRGILAQIALHCNNFMRLSAPGINVGYWEA 377

Query: 646 SAIASHLPNIKYLVLRNIDIKKKNLLVILKGCKQLVKLDIRNCIGFDEYDQEILKLSSAI 825
           SAI + LPN++YLVL+   I++K +++IL+GCKQLV LD+R C GFDE D EIL+L+S I
Sbjct: 378 SAIVTLLPNLRYLVLKGATIRQKRVVMILQGCKQLVHLDVRGCTGFDEDDAEILELASHI 437

Query: 826 KNFRCEGS 849
            +F CEGS
Sbjct: 438 PSFMCEGS 445


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