BLASTX nr result

ID: Bupleurum21_contig00022047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022047
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159845.1| PREDICTED: protein ALWAYS EARLY 3-like [Cucu...    74   1e-11
ref|XP_004134200.1| PREDICTED: LOW QUALITY PROTEIN: protein ALWA...    74   1e-11
ref|XP_002314456.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002516893.1| always early, putative [Ricinus communis] gi...    68   7e-10
ref|XP_002330359.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10

>ref|XP_004159845.1| PREDICTED: protein ALWAYS EARLY 3-like [Cucumis sativus]
          Length = 1161

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 59/151 (39%), Positives = 74/151 (49%), Gaps = 22/151 (14%)
 Frame = -3

Query: 395 DDDNDSGVGHENLIALAEASQRGGSPPFSCSPKRMVGNQVM-----DEDNSEGRM----- 246
           DD ND  V HE  + L EASQR GSP  S +P   + + V+     D   SE  M     
Sbjct: 219 DDPNDDDVAHEIALVLTEASQRDGSPQLSQTPNPKIESHVLSPIRNDRMRSESDMMSTKF 278

Query: 245 ---EADNGDCSRDMRYMFKAG-----NKST--LSQKGGRPYGKKLEVGNNK-KRQDEIRE 99
              E D G C   +             KST  + +KG R YGKK EV  +     D+I+E
Sbjct: 279 RCSEMDEGGCELSLGSTGADNADYDLGKSTREVQRKGKRYYGKKPEVEESMYNHLDDIKE 338

Query: 98  ACSGT-EGQKLGPVREKIEAEVTNGKTSRYS 9
           ACSGT EGQK G +R K+E E  + K+ R S
Sbjct: 339 ACSGTEEGQKSGSLRGKLENEDLDVKSVRSS 369


>ref|XP_004134200.1| PREDICTED: LOW QUALITY PROTEIN: protein ALWAYS EARLY 3-like
           [Cucumis sativus]
          Length = 1161

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 59/151 (39%), Positives = 74/151 (49%), Gaps = 22/151 (14%)
 Frame = -3

Query: 395 DDDNDSGVGHENLIALAEASQRGGSPPFSCSPKRMVGNQVM-----DEDNSEGRM----- 246
           DD ND  V HE  + L EASQR GSP  S +P   + + V+     D   SE  M     
Sbjct: 219 DDPNDDDVAHEIALVLTEASQRDGSPQLSQTPNPKIESHVLSPIRNDRMRSESDMMSTKF 278

Query: 245 ---EADNGDCSRDMRYMFKAG-----NKST--LSQKGGRPYGKKLEVGNNK-KRQDEIRE 99
              E D G C   +             KST  + +KG R YGKK EV  +     D+I+E
Sbjct: 279 RCSEMDEGGCELSLGSTGADNADYDLGKSTREVQRKGKRYYGKKPEVEESMYNHLDDIKE 338

Query: 98  ACSGT-EGQKLGPVREKIEAEVTNGKTSRYS 9
           ACSGT EGQK G +R K+E E  + K+ R S
Sbjct: 339 ACSGTEEGQKSGSLRGKLENEDLDVKSVRSS 369


>ref|XP_002314456.1| predicted protein [Populus trichocarpa] gi|222863496|gb|EEF00627.1|
           predicted protein [Populus trichocarpa]
          Length = 406

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 60/158 (37%), Positives = 72/158 (45%), Gaps = 29/158 (18%)
 Frame = -3

Query: 392 DDNDSGVGHENLIALAEASQRGGSPPFSCSPKR-----------------------MVGN 282
           D  D  V HE  +AL EASQRGGSP  S +PKR                        +  
Sbjct: 213 DAVDDDVAHEIALALTEASQRGGSPQVSQTPKRKTKTPSPAQHDELMHPESEMMSAKLRG 272

Query: 281 QVMDEDNSE---GRMEADNGDCSRDMRYMFKAGNKSTLSQKGGRPYGKK-LEVGNN-KKR 117
             MDE   E   G  +A  GD +RD  +            KG R +G++ LEV  N    
Sbjct: 273 SEMDEVGCELSLGSTDAYGGDYARDRIFW-----------KGRRYHGRRSLEVEENLDNH 321

Query: 116 QDEIREACSGT-EGQKLGPVREKIEAEVTNGKTSRYSQ 6
            D++REACSGT EGQKL  V EK E EV   K  R S+
Sbjct: 322 LDDVREACSGTEEGQKLEAVEEKFEMEVAYSKLVRSSK 359


>ref|XP_002516893.1| always early, putative [Ricinus communis]
           gi|223543981|gb|EEF45507.1| always early, putative
           [Ricinus communis]
          Length = 1119

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 54/149 (36%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
 Frame = -3

Query: 392 DDNDSGVGHENLIALAEASQRGGSPPFSCSP-------------------KRMVGNQVMD 270
           D  D  V HE  + L EASQR GSP  S +P                     M  ++   
Sbjct: 214 DALDDDVAHEIALVLTEASQRAGSPQASQTPNGKAETPSLTRNGEHMHVESEMTSSKPRG 273

Query: 269 EDNSEGRMEADNGDCSRDMRYMFKAGNKSTLSQKGGRPYGKKLEVGNN-KKRQDEIREAC 93
            +  EG  E   G    DM +   A +K     KG   +G+K EV +N     D+I+EAC
Sbjct: 274 SEMDEGGCELSLGSTEADMEHY--ARDKRLTKGKG--YHGRKPEVEDNIDNSSDDIKEAC 329

Query: 92  SGT-EGQKLGPVREKIEAEVTNGKTSRYS 9
           SGT EGQKLG +R K E EV   K +R S
Sbjct: 330 SGTEEGQKLGAIRGKFEVEVVGTKFARSS 358


>ref|XP_002330359.1| predicted protein [Populus trichocarpa] gi|222871563|gb|EEF08694.1|
           predicted protein [Populus trichocarpa]
          Length = 980

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 53/147 (36%), Positives = 72/147 (48%), Gaps = 18/147 (12%)
 Frame = -3

Query: 392 DDNDSGVGHENLIALAEASQRGGSPPFSCSPKRMVGNQVMDEDNSEGRMEADNGDCSRDM 213
           D  D  V HE  +AL EASQRGGSP  S +PKR    ++      + +M A++   S  +
Sbjct: 58  DAVDDDVAHEIALALTEASQRGGSPQVSQTPKRK--TKMPSHAQHDEQMHAESEIMSAKL 115

Query: 212 R--YMFKAGNKSTLSQ---------------KGGRPYGKKLEVGNNKKRQDEIREACSGT 84
           R   M + G + +L                 KG R YG++    +     D++REACSGT
Sbjct: 116 RGSEMEEVGCELSLGSTEADVVDYVKDESFWKGKRYYGRRPPAEDLDDNLDDVREACSGT 175

Query: 83  -EGQKLGPVREKIEAEVTNGKTSRYSQ 6
            EGQKL  V E  E EV + K  R S+
Sbjct: 176 EEGQKLDAVEELFEMEVADTKLVRSSK 202


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