BLASTX nr result

ID: Bupleurum21_contig00022026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022026
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618072.1| E3 ubiquitin-protein ligase UHRF1 [Medicago ...    40   5e-07
gb|ADR79438.1| VARIANT IN METHYLATION-like protein [Liriodendron...    40   6e-06
ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    38   8e-06
ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR...    38   8e-06

>ref|XP_003618072.1| E3 ubiquitin-protein ligase UHRF1 [Medicago truncatula]
           gi|355519407|gb|AET01031.1| E3 ubiquitin-protein ligase
           UHRF1 [Medicago truncatula]
          Length = 696

 Score = 40.0 bits (92), Expect(2) = 5e-07
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
 Frame = -1

Query: 313 RINREIMDVIEKLQKLTKDEEELPEASSED---LDKENEVSNSQTEGMSGEGSKRK---- 155
           ++NRE+M VIE LQ+  + +EE  E +S +     +EN+  + +TE      S  K    
Sbjct: 578 QVNREMMGVIETLQRQAEQQEEQMEENSGESSAKSEENDKPDEETEVSKSSDSSEKVVEE 637

Query: 154 -GDTKVNLTKKKRKFDE 107
             +  VN  +KKRK D+
Sbjct: 638 INEDDVNPPQKKRKGDD 654



 Score = 38.5 bits (88), Expect(2) = 5e-07
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -3

Query: 377 QKNIMTCPAYPTDIAEFLQNPK 312
           QKNIM CP+  TDIAE+LQNP+
Sbjct: 557 QKNIMKCPSCATDIAEYLQNPQ 578


>gb|ADR79438.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera]
          Length = 713

 Score = 40.0 bits (92), Expect(2) = 6e-06
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = -3

Query: 377 QKNIMTCPAYPTDIAEFLQNPK 312
           QKN+M CP+ PTDI++FLQNP+
Sbjct: 560 QKNVMKCPSCPTDISDFLQNPQ 581



 Score = 34.7 bits (78), Expect(2) = 6e-06
 Identities = 17/53 (32%), Positives = 31/53 (58%)
 Frame = -1

Query: 313 RINREIMDVIEKLQKLTKDEEELPEASSEDLDKENEVSNSQTEGMSGEGSKRK 155
           ++NRE+MDVIE L++  K EE +  ++ E+ +   E  +   +  + EG+  K
Sbjct: 581 QVNRELMDVIESLKR--KSEENVEGSNEEECEGTGEKKSDNADEDTSEGTDEK 631


>ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS
           2-like [Cucumis sativus]
          Length = 688

 Score = 37.7 bits (86), Expect(2) = 8e-06
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = -3

Query: 377 QKNIMTCPAYPTDIAEFLQN 318
           QKN++TCP  PTDI++FLQN
Sbjct: 581 QKNVLTCPCCPTDISDFLQN 600



 Score = 36.6 bits (83), Expect(2) = 8e-06
 Identities = 20/57 (35%), Positives = 33/57 (57%)
 Frame = -1

Query: 313 RINREIMDVIEKLQKLTKDEEELPEASSEDLDKENEVSNSQTEGMSGEGSKRKGDTK 143
           ++NRE++DVIE L K   +EE+L E    D ++EN+    + EG   + S    +T+
Sbjct: 602 QVNRELLDVIETL-KSKIEEEKLCEEEEIDEEEENDEDGDENEGKGKDESNSPVETR 657


>ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis
           sativus]
          Length = 667

 Score = 37.7 bits (86), Expect(2) = 8e-06
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = -3

Query: 377 QKNIMTCPAYPTDIAEFLQN 318
           QKN++TCP  PTDI++FLQN
Sbjct: 581 QKNVLTCPCCPTDISDFLQN 600



 Score = 36.6 bits (83), Expect(2) = 8e-06
 Identities = 20/57 (35%), Positives = 33/57 (57%)
 Frame = -1

Query: 313 RINREIMDVIEKLQKLTKDEEELPEASSEDLDKENEVSNSQTEGMSGEGSKRKGDTK 143
           ++NRE++DVIE L K   +EE+L E    D ++EN+    + EG   + S    +T+
Sbjct: 602 QVNRELLDVIETL-KSKIEEEKLCEEEEIDEEEENDEDGDENEGKGKDESNSPVETR 657


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