BLASTX nr result
ID: Bupleurum21_contig00022026
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00022026 (379 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003618072.1| E3 ubiquitin-protein ligase UHRF1 [Medicago ... 40 5e-07 gb|ADR79438.1| VARIANT IN METHYLATION-like protein [Liriodendron... 40 6e-06 ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 38 8e-06 ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR... 38 8e-06 >ref|XP_003618072.1| E3 ubiquitin-protein ligase UHRF1 [Medicago truncatula] gi|355519407|gb|AET01031.1| E3 ubiquitin-protein ligase UHRF1 [Medicago truncatula] Length = 696 Score = 40.0 bits (92), Expect(2) = 5e-07 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%) Frame = -1 Query: 313 RINREIMDVIEKLQKLTKDEEELPEASSED---LDKENEVSNSQTEGMSGEGSKRK---- 155 ++NRE+M VIE LQ+ + +EE E +S + +EN+ + +TE S K Sbjct: 578 QVNREMMGVIETLQRQAEQQEEQMEENSGESSAKSEENDKPDEETEVSKSSDSSEKVVEE 637 Query: 154 -GDTKVNLTKKKRKFDE 107 + VN +KKRK D+ Sbjct: 638 INEDDVNPPQKKRKGDD 654 Score = 38.5 bits (88), Expect(2) = 5e-07 Identities = 16/22 (72%), Positives = 19/22 (86%) Frame = -3 Query: 377 QKNIMTCPAYPTDIAEFLQNPK 312 QKNIM CP+ TDIAE+LQNP+ Sbjct: 557 QKNIMKCPSCATDIAEYLQNPQ 578 >gb|ADR79438.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera] Length = 713 Score = 40.0 bits (92), Expect(2) = 6e-06 Identities = 15/22 (68%), Positives = 20/22 (90%) Frame = -3 Query: 377 QKNIMTCPAYPTDIAEFLQNPK 312 QKN+M CP+ PTDI++FLQNP+ Sbjct: 560 QKNVMKCPSCPTDISDFLQNPQ 581 Score = 34.7 bits (78), Expect(2) = 6e-06 Identities = 17/53 (32%), Positives = 31/53 (58%) Frame = -1 Query: 313 RINREIMDVIEKLQKLTKDEEELPEASSEDLDKENEVSNSQTEGMSGEGSKRK 155 ++NRE+MDVIE L++ K EE + ++ E+ + E + + + EG+ K Sbjct: 581 QVNRELMDVIESLKR--KSEENVEGSNEEECEGTGEKKSDNADEDTSEGTDEK 631 >ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis sativus] Length = 688 Score = 37.7 bits (86), Expect(2) = 8e-06 Identities = 14/20 (70%), Positives = 18/20 (90%) Frame = -3 Query: 377 QKNIMTCPAYPTDIAEFLQN 318 QKN++TCP PTDI++FLQN Sbjct: 581 QKNVLTCPCCPTDISDFLQN 600 Score = 36.6 bits (83), Expect(2) = 8e-06 Identities = 20/57 (35%), Positives = 33/57 (57%) Frame = -1 Query: 313 RINREIMDVIEKLQKLTKDEEELPEASSEDLDKENEVSNSQTEGMSGEGSKRKGDTK 143 ++NRE++DVIE L K +EE+L E D ++EN+ + EG + S +T+ Sbjct: 602 QVNRELLDVIETL-KSKIEEEKLCEEEEIDEEEENDEDGDENEGKGKDESNSPVETR 657 >ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis sativus] Length = 667 Score = 37.7 bits (86), Expect(2) = 8e-06 Identities = 14/20 (70%), Positives = 18/20 (90%) Frame = -3 Query: 377 QKNIMTCPAYPTDIAEFLQN 318 QKN++TCP PTDI++FLQN Sbjct: 581 QKNVLTCPCCPTDISDFLQN 600 Score = 36.6 bits (83), Expect(2) = 8e-06 Identities = 20/57 (35%), Positives = 33/57 (57%) Frame = -1 Query: 313 RINREIMDVIEKLQKLTKDEEELPEASSEDLDKENEVSNSQTEGMSGEGSKRKGDTK 143 ++NRE++DVIE L K +EE+L E D ++EN+ + EG + S +T+ Sbjct: 602 QVNRELLDVIETL-KSKIEEEKLCEEEEIDEEEENDEDGDENEGKGKDESNSPVETR 657