BLASTX nr result
ID: Bupleurum21_contig00022012
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00022012 (605 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF87890.1|AC012561_23 Similar tp transcription factors [Arab... 266 2e-69 ref|NP_564568.1| SNF2 and helicase domain-containing protein [Ar... 266 2e-69 gb|AAD50036.1|AC007980_1 Similar to transcription factors [Arabi... 266 2e-69 ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis ... 261 7e-68 ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel... 255 5e-66 >gb|AAF87890.1|AC012561_23 Similar tp transcription factors [Arabidopsis thaliana] Length = 1062 Score = 266 bits (681), Expect = 2e-69 Identities = 131/175 (74%), Positives = 148/175 (84%) Frame = +2 Query: 80 SIDSDCGTIAKVRWLRVILDEAQIIKNHRTLGARACAGIKAKSRWCLSGTPIQNTIDDLF 259 S D D GT+AKV W RV+LDEAQ IKNHRT ARAC G++AK RWCLSGTPIQNTIDDL+ Sbjct: 539 SSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLY 598 Query: 260 SYFRFLKYEPYTSYTSFCSKLKDFISRDSVQGYKKLYAVLRAVMLRRTKDTFIDGEPIIR 439 SYFRFLKY+PY Y SFC ++K ISR+S+QGYKKL AVLRA+MLRRTK T +DG+PII Sbjct: 599 SYFRFLKYDPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIIN 658 Query: 440 LPAKTINLSQAEFSEEERDFYKKLAANSLSQFKAYAAAGTVNQNYANILLMLLRL 604 LP KTINLSQ +FS EER FY KL ++S SQFKAYAAAGT+NQNYANILLMLLRL Sbjct: 659 LPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRL 713 >ref|NP_564568.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gi|14532630|gb|AAK64043.1| putative DNA-binding protein [Arabidopsis thaliana] gi|23296945|gb|AAN13207.1| putative DNA-binding protein [Arabidopsis thaliana] gi|332194424|gb|AEE32545.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 981 Score = 266 bits (681), Expect = 2e-69 Identities = 131/175 (74%), Positives = 148/175 (84%) Frame = +2 Query: 80 SIDSDCGTIAKVRWLRVILDEAQIIKNHRTLGARACAGIKAKSRWCLSGTPIQNTIDDLF 259 S D D GT+AKV W RV+LDEAQ IKNHRT ARAC G++AK RWCLSGTPIQNTIDDL+ Sbjct: 458 SSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLY 517 Query: 260 SYFRFLKYEPYTSYTSFCSKLKDFISRDSVQGYKKLYAVLRAVMLRRTKDTFIDGEPIIR 439 SYFRFLKY+PY Y SFC ++K ISR+S+QGYKKL AVLRA+MLRRTK T +DG+PII Sbjct: 518 SYFRFLKYDPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIIN 577 Query: 440 LPAKTINLSQAEFSEEERDFYKKLAANSLSQFKAYAAAGTVNQNYANILLMLLRL 604 LP KTINLSQ +FS EER FY KL ++S SQFKAYAAAGT+NQNYANILLMLLRL Sbjct: 578 LPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRL 632 >gb|AAD50036.1|AC007980_1 Similar to transcription factors [Arabidopsis thaliana] Length = 953 Score = 266 bits (681), Expect = 2e-69 Identities = 131/175 (74%), Positives = 148/175 (84%) Frame = +2 Query: 80 SIDSDCGTIAKVRWLRVILDEAQIIKNHRTLGARACAGIKAKSRWCLSGTPIQNTIDDLF 259 S D D GT+AKV W RV+LDEAQ IKNHRT ARAC G++AK RWCLSGTPIQNTIDDL+ Sbjct: 539 SSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLY 598 Query: 260 SYFRFLKYEPYTSYTSFCSKLKDFISRDSVQGYKKLYAVLRAVMLRRTKDTFIDGEPIIR 439 SYFRFLKY+PY Y SFC ++K ISR+S+QGYKKL AVLRA+MLRRTK T +DG+PII Sbjct: 599 SYFRFLKYDPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIIN 658 Query: 440 LPAKTINLSQAEFSEEERDFYKKLAANSLSQFKAYAAAGTVNQNYANILLMLLRL 604 LP KTINLSQ +FS EER FY KL ++S SQFKAYAAAGT+NQNYANILLMLLRL Sbjct: 659 LPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRL 713 >ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297337416|gb|EFH67833.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 980 Score = 261 bits (667), Expect = 7e-68 Identities = 128/175 (73%), Positives = 146/175 (83%) Frame = +2 Query: 80 SIDSDCGTIAKVRWLRVILDEAQIIKNHRTLGARACAGIKAKSRWCLSGTPIQNTIDDLF 259 S D D GT+AKV W RV+LDEAQ IKNHRT ARAC G++AK RWCLSGTPIQNTIDDL+ Sbjct: 458 SSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLY 517 Query: 260 SYFRFLKYEPYTSYTSFCSKLKDFISRDSVQGYKKLYAVLRAVMLRRTKDTFIDGEPIIR 439 SYFRFLKY+PY Y SFC ++K ISR+S+ GYKKL AVLRA+MLRRTK T +DG+PII Sbjct: 518 SYFRFLKYDPYAVYKSFCHQIKGPISRNSLHGYKKLQAVLRAIMLRRTKGTLLDGQPIIN 577 Query: 440 LPAKTINLSQAEFSEEERDFYKKLAANSLSQFKAYAAAGTVNQNYANILLMLLRL 604 LP KTINL + +FS EER FY KL ++S SQFKAYAAAGT+NQNYANILLMLLRL Sbjct: 578 LPPKTINLIKVDFSVEERSFYMKLESDSRSQFKAYAAAGTLNQNYANILLMLLRL 632 >ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like [Vitis vinifera] Length = 1013 Score = 255 bits (651), Expect = 5e-66 Identities = 129/175 (73%), Positives = 142/175 (81%) Frame = +2 Query: 80 SIDSDCGTIAKVRWLRVILDEAQIIKNHRTLGARACAGIKAKSRWCLSGTPIQNTIDDLF 259 SID DCG +A+V W RVILDEAQ IKNHRT ARAC ++AK RWCLSGTPIQN IDDL+ Sbjct: 510 SIDYDCGPLARVGWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNAIDDLY 569 Query: 260 SYFRFLKYEPYTSYTSFCSKLKDFISRDSVQGYKKLYAVLRAVMLRRTKDTFIDGEPIIR 439 SYFRFLKY+PY Y SF + +K ISR+SV GYKKL AVLRA+MLRRTK T IDG PII Sbjct: 570 SYFRFLKYDPYAVYKSFYNTIKVPISRNSVHGYKKLQAVLRAIMLRRTKGTLIDGTPIIN 629 Query: 440 LPAKTINLSQAEFSEEERDFYKKLAANSLSQFKAYAAAGTVNQNYANILLMLLRL 604 LP KTI LS+ +FS EER FY KL A+S SQFK YAAAGTVNQNYANILLMLLRL Sbjct: 630 LPPKTICLSKVDFSSEERAFYSKLEADSRSQFKEYAAAGTVNQNYANILLMLLRL 684