BLASTX nr result

ID: Bupleurum21_contig00022012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022012
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF87890.1|AC012561_23 Similar tp transcription factors [Arab...   266   2e-69
ref|NP_564568.1| SNF2 and helicase domain-containing protein [Ar...   266   2e-69
gb|AAD50036.1|AC007980_1 Similar to transcription factors [Arabi...   266   2e-69
ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis ...   261   7e-68
ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...   255   5e-66

>gb|AAF87890.1|AC012561_23 Similar tp transcription factors [Arabidopsis thaliana]
          Length = 1062

 Score =  266 bits (681), Expect = 2e-69
 Identities = 131/175 (74%), Positives = 148/175 (84%)
 Frame = +2

Query: 80   SIDSDCGTIAKVRWLRVILDEAQIIKNHRTLGARACAGIKAKSRWCLSGTPIQNTIDDLF 259
            S D D GT+AKV W RV+LDEAQ IKNHRT  ARAC G++AK RWCLSGTPIQNTIDDL+
Sbjct: 539  SSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLY 598

Query: 260  SYFRFLKYEPYTSYTSFCSKLKDFISRDSVQGYKKLYAVLRAVMLRRTKDTFIDGEPIIR 439
            SYFRFLKY+PY  Y SFC ++K  ISR+S+QGYKKL AVLRA+MLRRTK T +DG+PII 
Sbjct: 599  SYFRFLKYDPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIIN 658

Query: 440  LPAKTINLSQAEFSEEERDFYKKLAANSLSQFKAYAAAGTVNQNYANILLMLLRL 604
            LP KTINLSQ +FS EER FY KL ++S SQFKAYAAAGT+NQNYANILLMLLRL
Sbjct: 659  LPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRL 713


>ref|NP_564568.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
           gi|14532630|gb|AAK64043.1| putative DNA-binding protein
           [Arabidopsis thaliana] gi|23296945|gb|AAN13207.1|
           putative DNA-binding protein [Arabidopsis thaliana]
           gi|332194424|gb|AEE32545.1| SNF2 and helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 981

 Score =  266 bits (681), Expect = 2e-69
 Identities = 131/175 (74%), Positives = 148/175 (84%)
 Frame = +2

Query: 80  SIDSDCGTIAKVRWLRVILDEAQIIKNHRTLGARACAGIKAKSRWCLSGTPIQNTIDDLF 259
           S D D GT+AKV W RV+LDEAQ IKNHRT  ARAC G++AK RWCLSGTPIQNTIDDL+
Sbjct: 458 SSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLY 517

Query: 260 SYFRFLKYEPYTSYTSFCSKLKDFISRDSVQGYKKLYAVLRAVMLRRTKDTFIDGEPIIR 439
           SYFRFLKY+PY  Y SFC ++K  ISR+S+QGYKKL AVLRA+MLRRTK T +DG+PII 
Sbjct: 518 SYFRFLKYDPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIIN 577

Query: 440 LPAKTINLSQAEFSEEERDFYKKLAANSLSQFKAYAAAGTVNQNYANILLMLLRL 604
           LP KTINLSQ +FS EER FY KL ++S SQFKAYAAAGT+NQNYANILLMLLRL
Sbjct: 578 LPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRL 632


>gb|AAD50036.1|AC007980_1 Similar to transcription factors [Arabidopsis thaliana]
          Length = 953

 Score =  266 bits (681), Expect = 2e-69
 Identities = 131/175 (74%), Positives = 148/175 (84%)
 Frame = +2

Query: 80   SIDSDCGTIAKVRWLRVILDEAQIIKNHRTLGARACAGIKAKSRWCLSGTPIQNTIDDLF 259
            S D D GT+AKV W RV+LDEAQ IKNHRT  ARAC G++AK RWCLSGTPIQNTIDDL+
Sbjct: 539  SSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLY 598

Query: 260  SYFRFLKYEPYTSYTSFCSKLKDFISRDSVQGYKKLYAVLRAVMLRRTKDTFIDGEPIIR 439
            SYFRFLKY+PY  Y SFC ++K  ISR+S+QGYKKL AVLRA+MLRRTK T +DG+PII 
Sbjct: 599  SYFRFLKYDPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIIN 658

Query: 440  LPAKTINLSQAEFSEEERDFYKKLAANSLSQFKAYAAAGTVNQNYANILLMLLRL 604
            LP KTINLSQ +FS EER FY KL ++S SQFKAYAAAGT+NQNYANILLMLLRL
Sbjct: 659  LPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRL 713


>ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337416|gb|EFH67833.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 980

 Score =  261 bits (667), Expect = 7e-68
 Identities = 128/175 (73%), Positives = 146/175 (83%)
 Frame = +2

Query: 80  SIDSDCGTIAKVRWLRVILDEAQIIKNHRTLGARACAGIKAKSRWCLSGTPIQNTIDDLF 259
           S D D GT+AKV W RV+LDEAQ IKNHRT  ARAC G++AK RWCLSGTPIQNTIDDL+
Sbjct: 458 SSDPDSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLY 517

Query: 260 SYFRFLKYEPYTSYTSFCSKLKDFISRDSVQGYKKLYAVLRAVMLRRTKDTFIDGEPIIR 439
           SYFRFLKY+PY  Y SFC ++K  ISR+S+ GYKKL AVLRA+MLRRTK T +DG+PII 
Sbjct: 518 SYFRFLKYDPYAVYKSFCHQIKGPISRNSLHGYKKLQAVLRAIMLRRTKGTLLDGQPIIN 577

Query: 440 LPAKTINLSQAEFSEEERDFYKKLAANSLSQFKAYAAAGTVNQNYANILLMLLRL 604
           LP KTINL + +FS EER FY KL ++S SQFKAYAAAGT+NQNYANILLMLLRL
Sbjct: 578 LPPKTINLIKVDFSVEERSFYMKLESDSRSQFKAYAAAGTLNQNYANILLMLLRL 632


>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Vitis vinifera]
          Length = 1013

 Score =  255 bits (651), Expect = 5e-66
 Identities = 129/175 (73%), Positives = 142/175 (81%)
 Frame = +2

Query: 80   SIDSDCGTIAKVRWLRVILDEAQIIKNHRTLGARACAGIKAKSRWCLSGTPIQNTIDDLF 259
            SID DCG +A+V W RVILDEAQ IKNHRT  ARAC  ++AK RWCLSGTPIQN IDDL+
Sbjct: 510  SIDYDCGPLARVGWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNAIDDLY 569

Query: 260  SYFRFLKYEPYTSYTSFCSKLKDFISRDSVQGYKKLYAVLRAVMLRRTKDTFIDGEPIIR 439
            SYFRFLKY+PY  Y SF + +K  ISR+SV GYKKL AVLRA+MLRRTK T IDG PII 
Sbjct: 570  SYFRFLKYDPYAVYKSFYNTIKVPISRNSVHGYKKLQAVLRAIMLRRTKGTLIDGTPIIN 629

Query: 440  LPAKTINLSQAEFSEEERDFYKKLAANSLSQFKAYAAAGTVNQNYANILLMLLRL 604
            LP KTI LS+ +FS EER FY KL A+S SQFK YAAAGTVNQNYANILLMLLRL
Sbjct: 630  LPPKTICLSKVDFSSEERAFYSKLEADSRSQFKEYAAAGTVNQNYANILLMLLRL 684


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