BLASTX nr result
ID: Bupleurum21_contig00022008
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00022008 (298 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-33 ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi... 145 4e-33 gb|AAS80150.1| ACT11D09.4 [Cucumis melo] 143 2e-32 ref|XP_002331124.1| predicted protein [Populus trichocarpa] gi|2... 133 1e-29 ref|XP_003630728.1| Pentatricopeptide repeat-containing protein ... 132 2e-29 >ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like [Cucumis sativus] Length = 559 Score = 145 bits (365), Expect = 4e-33 Identities = 67/85 (78%), Positives = 78/85 (91%) Frame = +1 Query: 43 EKANELFDELKERCLVYDGIVSATFMDWYFKQGKEKEAMEAYKYLLSREFRMVPATCNVL 222 EKANELFDELKERCLVYDG+V+ATFMDW+F QGKEKEAME+YK LL R+F+MVPATCNVL Sbjct: 75 EKANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVL 134 Query: 223 LEVLIRYGKKAEAEALFDRMLDDHT 297 LEVL+++ KK EA LFD+MLD+HT Sbjct: 135 LEVLLKHEKKTEAWTLFDQMLDNHT 159 >ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like [Cucumis sativus] Length = 871 Score = 145 bits (365), Expect = 4e-33 Identities = 67/85 (78%), Positives = 78/85 (91%) Frame = +1 Query: 43 EKANELFDELKERCLVYDGIVSATFMDWYFKQGKEKEAMEAYKYLLSREFRMVPATCNVL 222 EKANELFDELKERCLVYDG+V+ATFMDW+F QGKEKEAME+YK LL R+F+MVPATCNVL Sbjct: 241 EKANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVL 300 Query: 223 LEVLIRYGKKAEAEALFDRMLDDHT 297 LEVL+++ KK EA LFD+MLD+HT Sbjct: 301 LEVLLKHEKKTEAWTLFDQMLDNHT 325 >gb|AAS80150.1| ACT11D09.4 [Cucumis melo] Length = 896 Score = 143 bits (360), Expect = 2e-32 Identities = 66/84 (78%), Positives = 77/84 (91%) Frame = +1 Query: 46 KANELFDELKERCLVYDGIVSATFMDWYFKQGKEKEAMEAYKYLLSREFRMVPATCNVLL 225 KANELFDELKERCLVYDG+V+ATFMDW+F QGKEKEAME+YK LL R+F+MVPATCNVLL Sbjct: 268 KANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLL 327 Query: 226 EVLIRYGKKAEAEALFDRMLDDHT 297 EVL+++ KK EA LFD+MLD+HT Sbjct: 328 EVLLKHEKKTEAWTLFDQMLDNHT 351 >ref|XP_002331124.1| predicted protein [Populus trichocarpa] gi|222872852|gb|EEF09983.1| predicted protein [Populus trichocarpa] Length = 832 Score = 133 bits (335), Expect = 1e-29 Identities = 60/85 (70%), Positives = 73/85 (85%) Frame = +1 Query: 43 EKANELFDELKERCLVYDGIVSATFMDWYFKQGKEKEAMEAYKYLLSREFRMVPATCNVL 222 EKANE FDELKERCLVYDG+++ATFMDW+FKQGK+KEAM +YK + F++VPATCN + Sbjct: 269 EKANEFFDELKERCLVYDGVINATFMDWWFKQGKDKEAMGSYKSWQDKNFKVVPATCNTI 328 Query: 223 LEVLIRYGKKAEAEALFDRMLDDHT 297 LEVL+RYGKK A ALF+ MLD+HT Sbjct: 329 LEVLVRYGKKEAACALFEHMLDNHT 353 >ref|XP_003630728.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355524750|gb|AET05204.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 918 Score = 132 bits (333), Expect = 2e-29 Identities = 59/85 (69%), Positives = 75/85 (88%) Frame = +1 Query: 43 EKANELFDELKERCLVYDGIVSATFMDWYFKQGKEKEAMEAYKYLLSREFRMVPATCNVL 222 +KANELFDELK RC VYDG+V+AT+M+W+FKQG++KEAM++YK + REFRM PATCNVL Sbjct: 241 DKANELFDELKGRCSVYDGVVNATYMEWFFKQGRDKEAMDSYKSFMDREFRMTPATCNVL 300 Query: 223 LEVLIRYGKKAEAEALFDRMLDDHT 297 LEVL+++ KK EA LFD+MLD+HT Sbjct: 301 LEVLLKHDKKKEAWKLFDQMLDNHT 325