BLASTX nr result

ID: Bupleurum21_contig00022008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022008
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
gb|AAS80150.1| ACT11D09.4 [Cucumis melo]                              143   2e-32
ref|XP_002331124.1| predicted protein [Populus trichocarpa] gi|2...   133   1e-29
ref|XP_003630728.1| Pentatricopeptide repeat-containing protein ...   132   2e-29

>ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 559

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/85 (78%), Positives = 78/85 (91%)
 Frame = +1

Query: 43  EKANELFDELKERCLVYDGIVSATFMDWYFKQGKEKEAMEAYKYLLSREFRMVPATCNVL 222
           EKANELFDELKERCLVYDG+V+ATFMDW+F QGKEKEAME+YK LL R+F+MVPATCNVL
Sbjct: 75  EKANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVL 134

Query: 223 LEVLIRYGKKAEAEALFDRMLDDHT 297
           LEVL+++ KK EA  LFD+MLD+HT
Sbjct: 135 LEVLLKHEKKTEAWTLFDQMLDNHT 159


>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 871

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/85 (78%), Positives = 78/85 (91%)
 Frame = +1

Query: 43  EKANELFDELKERCLVYDGIVSATFMDWYFKQGKEKEAMEAYKYLLSREFRMVPATCNVL 222
           EKANELFDELKERCLVYDG+V+ATFMDW+F QGKEKEAME+YK LL R+F+MVPATCNVL
Sbjct: 241 EKANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVL 300

Query: 223 LEVLIRYGKKAEAEALFDRMLDDHT 297
           LEVL+++ KK EA  LFD+MLD+HT
Sbjct: 301 LEVLLKHEKKTEAWTLFDQMLDNHT 325


>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
          Length = 896

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/84 (78%), Positives = 77/84 (91%)
 Frame = +1

Query: 46  KANELFDELKERCLVYDGIVSATFMDWYFKQGKEKEAMEAYKYLLSREFRMVPATCNVLL 225
           KANELFDELKERCLVYDG+V+ATFMDW+F QGKEKEAME+YK LL R+F+MVPATCNVLL
Sbjct: 268 KANELFDELKERCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLL 327

Query: 226 EVLIRYGKKAEAEALFDRMLDDHT 297
           EVL+++ KK EA  LFD+MLD+HT
Sbjct: 328 EVLLKHEKKTEAWTLFDQMLDNHT 351


>ref|XP_002331124.1| predicted protein [Populus trichocarpa] gi|222872852|gb|EEF09983.1|
           predicted protein [Populus trichocarpa]
          Length = 832

 Score =  133 bits (335), Expect = 1e-29
 Identities = 60/85 (70%), Positives = 73/85 (85%)
 Frame = +1

Query: 43  EKANELFDELKERCLVYDGIVSATFMDWYFKQGKEKEAMEAYKYLLSREFRMVPATCNVL 222
           EKANE FDELKERCLVYDG+++ATFMDW+FKQGK+KEAM +YK    + F++VPATCN +
Sbjct: 269 EKANEFFDELKERCLVYDGVINATFMDWWFKQGKDKEAMGSYKSWQDKNFKVVPATCNTI 328

Query: 223 LEVLIRYGKKAEAEALFDRMLDDHT 297
           LEVL+RYGKK  A ALF+ MLD+HT
Sbjct: 329 LEVLVRYGKKEAACALFEHMLDNHT 353


>ref|XP_003630728.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524750|gb|AET05204.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 918

 Score =  132 bits (333), Expect = 2e-29
 Identities = 59/85 (69%), Positives = 75/85 (88%)
 Frame = +1

Query: 43  EKANELFDELKERCLVYDGIVSATFMDWYFKQGKEKEAMEAYKYLLSREFRMVPATCNVL 222
           +KANELFDELK RC VYDG+V+AT+M+W+FKQG++KEAM++YK  + REFRM PATCNVL
Sbjct: 241 DKANELFDELKGRCSVYDGVVNATYMEWFFKQGRDKEAMDSYKSFMDREFRMTPATCNVL 300

Query: 223 LEVLIRYGKKAEAEALFDRMLDDHT 297
           LEVL+++ KK EA  LFD+MLD+HT
Sbjct: 301 LEVLLKHDKKKEAWKLFDQMLDNHT 325


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