BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00022000
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containi...   251   6e-65
ref|XP_002516677.1| pentatricopeptide repeat-containing protein,...   241   6e-62
ref|XP_002875957.1| EMB1796 [Arabidopsis lyrata subsp. lyrata] g...   234   4e-60
ref|XP_003602247.1| Pentatricopeptide repeat-containing protein ...   233   1e-59
ref|XP_004146221.1| PREDICTED: pentatricopeptide repeat-containi...   227   9e-58

>ref|XP_002272755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Vitis vinifera]
          Length = 672

 Score =  251 bits (640), Expect = 6e-65
 Identities = 116/155 (74%), Positives = 138/155 (89%)
 Frame = +3

Query: 51  ALMKGYFLRGMESEAMECYRECVGEESKIKMNAVAYTYVLDALSKNGKFDEALKLFDRML 230
           +LMKGYFLRGME EAM+CY E VGE SKI+M+AVA+  VLDALSKNGKFDEA+ LF+RM+
Sbjct: 277 SLMKGYFLRGMEKEAMQCYAEAVGEGSKIRMSAVAFNSVLDALSKNGKFDEAMLLFERMM 336

Query: 231 VQHNPPKKLSVNLGSYNVIVDGYCAEGKFSDAIEVFKSMGEKRCSPDTLSYNNLIEQLCN 410
            ++NPP++LS+NLGS+NV+VDG+C  G+F DAIEVF+ MGEKRCS DTLSYNNLIEQLCN
Sbjct: 337 AEYNPPRRLSMNLGSFNVMVDGFCTAGRFKDAIEVFRKMGEKRCSADTLSYNNLIEQLCN 396

Query: 411 NGLLAEGEELYRSMAEKGVSPDEFTFVMLMDTCFK 515
           NG+LAE EELY  MA KGV+PDEFT+V+LMDTCFK
Sbjct: 397 NGMLAEAEELYGEMANKGVNPDEFTYVLLMDTCFK 431


>ref|XP_002516677.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544172|gb|EEF45696.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 660

 Score =  241 bits (614), Expect = 6e-62
 Identities = 111/154 (72%), Positives = 131/154 (85%)
 Frame = +3

Query: 54  LMKGYFLRGMESEAMECYRECVGEESKIKMNAVAYTYVLDALSKNGKFDEALKLFDRMLV 233
           LMKGYF++GME+EAMECY E VGE SK++MNAVAY  VLDAL KNGKFD ALKLFDRML 
Sbjct: 291 LMKGYFMKGMENEAMECYEEAVGENSKVRMNAVAYNSVLDALCKNGKFDVALKLFDRMLQ 350

Query: 234 QHNPPKKLSVNLGSYNVIVDGYCAEGKFSDAIEVFKSMGEKRCSPDTLSYNNLIEQLCNN 413
           QHNPP+ L+VNLGS+NVIVDGYCA+G+F DAI+VF+ MG+ RCSPD LSYNNLI+QLC N
Sbjct: 351 QHNPPRYLAVNLGSFNVIVDGYCAQGRFEDAIDVFRKMGDYRCSPDVLSYNNLIDQLCKN 410

Query: 414 GLLAEGEELYRSMAEKGVSPDEFTFVMLMDTCFK 515
           G+L E E+LY  M  KGV PDE+T+ +LMDTC +
Sbjct: 411 GMLVEAEDLYGEMDGKGVKPDEYTYGLLMDTCLE 444


>ref|XP_002875957.1| EMB1796 [Arabidopsis lyrata subsp. lyrata]
           gi|297321795|gb|EFH52216.1| EMB1796 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 632

 Score =  234 bits (598), Expect = 4e-60
 Identities = 104/154 (67%), Positives = 134/154 (87%)
 Frame = +3

Query: 54  LMKGYFLRGMESEAMECYRECVGEESKIKMNAVAYTYVLDALSKNGKFDEALKLFDRMLV 233
           LMKGYF++ ME EAMECY E +GE SK++M+A+AY YVL+ALS+NGKFDEALKLFD +  
Sbjct: 282 LMKGYFMKEMEKEAMECYEEAIGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKK 341

Query: 234 QHNPPKKLSVNLGSYNVIVDGYCAEGKFSDAIEVFKSMGEKRCSPDTLSYNNLIEQLCNN 413
           +HNPP++L+VNLG++NV+VDGYCAEG++ +A+EVF+ MG+ RCSPDTLS+NNL+ QLC+N
Sbjct: 342 EHNPPRRLAVNLGTFNVVVDGYCAEGRYEEAMEVFRQMGDYRCSPDTLSFNNLMNQLCDN 401

Query: 414 GLLAEGEELYRSMAEKGVSPDEFTFVMLMDTCFK 515
           GLLAE E+LY  M EK V PDE+T+ +LMDTCFK
Sbjct: 402 GLLAEAEKLYGEMEEKKVKPDEYTYGLLMDTCFK 435


>ref|XP_003602247.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491295|gb|AES72498.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 704

 Score =  233 bits (594), Expect = 1e-59
 Identities = 109/154 (70%), Positives = 131/154 (85%)
 Frame = +3

Query: 54  LMKGYFLRGMESEAMECYRECVGEESKIKMNAVAYTYVLDALSKNGKFDEALKLFDRMLV 233
           LMKGYFL+GME EAMECY+E   E  K  M+ +AY  VLDAL+KNGKFDEA++LFDRM+ 
Sbjct: 284 LMKGYFLKGMEKEAMECYQEVFVEGKK--MSDIAYNSVLDALAKNGKFDEAMRLFDRMIK 341

Query: 234 QHNPPKKLSVNLGSYNVIVDGYCAEGKFSDAIEVFKSMGEKRCSPDTLSYNNLIEQLCNN 413
           +HNPP KL+VNLGS+NV+VDGYCAEGKF +AIEVF+SMGE RC PDTLS+NNLIEQLCNN
Sbjct: 342 EHNPPAKLAVNLGSFNVMVDGYCAEGKFKEAIEVFRSMGESRCKPDTLSFNNLIEQLCNN 401

Query: 414 GLLAEGEELYRSMAEKGVSPDEFTFVMLMDTCFK 515
           G++ E EE+Y  M  KGV+PDE+T+ +LMDTCFK
Sbjct: 402 GMILEAEEVYGEMEGKGVNPDEYTYGLLMDTCFK 435


>ref|XP_004146221.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49240-like [Cucumis sativus]
           gi|449511036|ref|XP_004163845.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g49240-like [Cucumis sativus]
          Length = 624

 Score =  227 bits (578), Expect = 9e-58
 Identities = 104/154 (67%), Positives = 129/154 (83%)
 Frame = +3

Query: 54  LMKGYFLRGMESEAMECYRECVGEESKIKMNAVAYTYVLDALSKNGKFDEALKLFDRMLV 233
           LMKGYF++ ME EAM+CY E VG+ S +KM+A+AY  VLDAL +NGKF EAL LFDRM  
Sbjct: 284 LMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTK 343

Query: 234 QHNPPKKLSVNLGSYNVIVDGYCAEGKFSDAIEVFKSMGEKRCSPDTLSYNNLIEQLCNN 413
           +H PP+ L+VNLGS+NV+VDGYC EG+F +AIEVF+ MG+ RC PDTLS+NNLIEQLCNN
Sbjct: 344 EHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNN 403

Query: 414 GLLAEGEELYRSMAEKGVSPDEFTFVMLMDTCFK 515
           G+LAE E LY +M +KGV+PDEFT+ +LMD+CFK
Sbjct: 404 GMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFK 437