BLASTX nr result

ID: Bupleurum21_contig00021952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021952
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237920.1| tyrosine phosphatase 1 [Glycine max] gi|3413...    65   6e-09
ref|XP_003556188.1| PREDICTED: tyrosine-protein phosphatase non-...    64   1e-08
emb|CBI18544.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_002267287.1| PREDICTED: tyrosine-protein phosphatase non-...    62   5e-08
emb|CAA06615.1| protein tyrosine phosphatase [Pisum sativum]           59   5e-07

>ref|NP_001237920.1| tyrosine phosphatase 1 [Glycine max] gi|3413473|emb|CAA06975.1|
           tyrosine phosphatase 1 [Glycine max]
          Length = 338

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/91 (38%), Positives = 56/91 (61%)
 Frame = -2

Query: 274 GNFNSRSKSAMAAAGKSRSVNASSTFDFPSKLSLSSHQINYCSQALTFLKDKISQRGLIS 95
           GN  + S SA++        N + + D PS+++L+S Q+N+C+QAL  LK+K+    +I+
Sbjct: 3   GNPATTSSSALSP----EKFNFNFSPDNPSRITLTSDQVNHCTQALNILKEKLHAPNVIT 58

Query: 94  REFDILQTDRMRALEANNRCSVAYSTNNIRK 2
           +EF  LQ +R+   E   RC+VAY   N+RK
Sbjct: 59  QEFAHLQANRITPSEMRRRCTVAYDDVNLRK 89


>ref|XP_003556188.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 20-like
           [Glycine max]
          Length = 338

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/88 (36%), Positives = 55/88 (62%)
 Frame = -2

Query: 265 NSRSKSAMAAAGKSRSVNASSTFDFPSKLSLSSHQINYCSQALTFLKDKISQRGLISREF 86
           NS + +A ++A    ++  + + D PS++ L+S Q+N+C+QAL  LK+K+    +I++EF
Sbjct: 4   NSATATATSSALSPENLKFNFSPDNPSRIILTSDQVNHCTQALNLLKEKLHDPHVITQEF 63

Query: 85  DILQTDRMRALEANNRCSVAYSTNNIRK 2
             LQ +R+   E   RC+VAY   N+ K
Sbjct: 64  AHLQANRITPSEMRRRCTVAYDAVNLSK 91


>emb|CBI18544.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
 Frame = -2

Query: 247 AMAAAGKSRSVNAS-STFDF----PSKLSLSSHQINYCSQALTFLKDKISQRGLISREFD 83
           A  +AGKS +V++S   FDF    P +LSL+  Q  +CS+AL F KDK+     I +EF 
Sbjct: 2   AAESAGKSIAVSSSRKPFDFSPDSPPRLSLTPDQFKHCSEALRFFKDKLQMPEKIRQEFA 61

Query: 82  ILQTDRMRALEANNRCSVAYSTNNIRK 2
            LQ +RMR  E    C+VA  + N+ K
Sbjct: 62  FLQANRMRPSEMMRSCTVALDSVNLSK 88


>ref|XP_002267287.1| PREDICTED: tyrosine-protein phosphatase non-receptor type 20-like
           [Vitis vinifera]
          Length = 339

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
 Frame = -2

Query: 247 AMAAAGKSRSVNAS-STFDF----PSKLSLSSHQINYCSQALTFLKDKISQRGLISREFD 83
           A  +AGKS +V++S   FDF    P +LSL+  Q  +CS+AL F KDK+     I +EF 
Sbjct: 2   AAESAGKSIAVSSSRKPFDFSPDSPPRLSLTPDQFKHCSEALRFFKDKLQMPEKIRQEFA 61

Query: 82  ILQTDRMRALEANNRCSVAYSTNNIRK 2
            LQ +RMR  E    C+VA  + N+ K
Sbjct: 62  FLQANRMRPSEMMRSCTVALDSVNLSK 88


>emb|CAA06615.1| protein tyrosine phosphatase [Pisum sativum]
          Length = 332

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
 Frame = -2

Query: 241 AAAGKSRSVNASSTF--DFPSKLSLSSHQINYCSQALTFLKDKISQRGLISREFDILQTD 68
           +A   S S + +STF  DFPS++ L+S QI +C++AL  LK+K+     +S++F  LQ++
Sbjct: 5   SAPPSSTSSHNNSTFSPDFPSRIPLTSDQIKHCTEALALLKNKLLNPHTVSQKFFHLQSN 64

Query: 67  RMRALEANNRCSVAYSTNNIRK 2
           R+   E   +C VA ++ N+ K
Sbjct: 65  RITLSETTKKCHVALNSANLSK 86


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