BLASTX nr result

ID: Bupleurum21_contig00021944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021944
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631062.1| Eukaryotic peptide chain release factor GTP-...    97   2e-18
emb|CBI15530.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002280982.1| PREDICTED: eukaryotic peptide chain release ...    94   1e-17
tpg|DAA38387.1| TPA: putative translation elongation/initiation ...    93   2e-17
ref|XP_002446212.1| hypothetical protein SORBIDRAFT_06g004300 [S...    93   2e-17

>ref|XP_003631062.1| Eukaryotic peptide chain release factor GTP-binding subunit
           [Medicago truncatula] gi|355525084|gb|AET05538.1|
           Eukaryotic peptide chain release factor GTP-binding
           subunit [Medicago truncatula]
          Length = 497

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 7/90 (7%)
 Frame = -1

Query: 357 IYAVGYKAKLYIHAVEEDCEIVEMVRDFDHRNER-------YVRKGATVLCRIQVDHMIC 199
           I+  GYKA L+IH+V E+CEIVE+++  D + ++       +V+ GA VLCR+QV +MIC
Sbjct: 408 IFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVLCRVQVSNMIC 467

Query: 198 VEKFHDCPRLGSLALRYGGKTVACGKVVAL 109
           VEKF D P+LG   LR  GKT+A GKV AL
Sbjct: 468 VEKFSDFPQLGRFTLRTEGKTIAVGKVTAL 497


>emb|CBI15530.3| unnamed protein product [Vitis vinifera]
          Length = 8416

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 7/90 (7%)
 Frame = -1

Query: 357  IYAVGYKAKLYIHAVEEDCEIVEMVRDFDHRNER-------YVRKGATVLCRIQVDHMIC 199
            I+  GYKA L+IH++ E+CEI+E+++  D + ++       +V+ GA VLCRIQV+++IC
Sbjct: 8321 IFTAGYKAVLHIHSIVEECEIIELLQQIDPKTKKPMKKKVLFVKNGAVVLCRIQVNNLIC 8380

Query: 198  VEKFHDCPRLGSLALRYGGKTVACGKVVAL 109
            +EKF D P+LG   LR  GKTVA GKV+ L
Sbjct: 8381 IEKFSDFPQLGRFTLRTEGKTVAMGKVMDL 8410


>ref|XP_002280982.1| PREDICTED: eukaryotic peptide chain release factor GTP-binding
           subunit ERF3B-like [Vitis vinifera]
          Length = 512

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 7/90 (7%)
 Frame = -1

Query: 357 IYAVGYKAKLYIHAVEEDCEIVEMVRDFDHRNER-------YVRKGATVLCRIQVDHMIC 199
           I+  GYKA L+IH++ E+CEI+E+++  D + ++       +V+ GA VLCRIQV+++IC
Sbjct: 417 IFTAGYKAVLHIHSIVEECEIIELLQQIDPKTKKPMKKKVLFVKNGAVVLCRIQVNNLIC 476

Query: 198 VEKFHDCPRLGSLALRYGGKTVACGKVVAL 109
           +EKF D P+LG   LR  GKTVA GKV+ L
Sbjct: 477 IEKFSDFPQLGRFTLRTEGKTVAMGKVMDL 506


>tpg|DAA38387.1| TPA: putative translation elongation/initiation factor family
           protein [Zea mays]
          Length = 541

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/98 (46%), Positives = 65/98 (66%), Gaps = 13/98 (13%)
 Frame = -1

Query: 357 IYAVGYKAKLYIHAVEEDCEIVEMVRDFDHRNER-------------YVRKGATVLCRIQ 217
           I+  GYKA L+IH+V E+CEIVE++ + D + ++             +V+ GA V+CRIQ
Sbjct: 438 IFTAGYKAVLHIHSVVEECEIVELIEEIDMKKKKGDPKKKKPKRKPLFVKNGAIVVCRIQ 497

Query: 216 VDHMICVEKFHDCPRLGSLALRYGGKTVACGKVVALIP 103
           V+++IC+EKF D P+LG   LR  GKTVA GKVV + P
Sbjct: 498 VNNLICIEKFSDFPQLGRFTLRTEGKTVAVGKVVDVPP 535


>ref|XP_002446212.1| hypothetical protein SORBIDRAFT_06g004300 [Sorghum bicolor]
           gi|241937395|gb|EES10540.1| hypothetical protein
           SORBIDRAFT_06g004300 [Sorghum bicolor]
          Length = 538

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 14/99 (14%)
 Frame = -1

Query: 357 IYAVGYKAKLYIHAVEEDCEIVEMVRDFDHRNER--------------YVRKGATVLCRI 220
           I+  GYKA L+IH+V E+CEIVE++ + D + ++              +V+ GA V+CRI
Sbjct: 434 IFTAGYKAVLHIHSVVEECEIVELIEEIDMKKKKEADPKKKKPKRKPLFVKNGAIVVCRI 493

Query: 219 QVDHMICVEKFHDCPRLGSLALRYGGKTVACGKVVALIP 103
           QV+++ICVEKF D P+LG   LR  GKTVA GKVV + P
Sbjct: 494 QVNNLICVEKFSDFPQLGRFTLRTEGKTVAVGKVVDVPP 532


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