BLASTX nr result

ID: Bupleurum21_contig00021927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021927
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263521.1| PREDICTED: translocase of chloroplast 90, ch...   175   2e-41
emb|CAN71551.1| hypothetical protein VITISV_030236 [Vitis vinifera]   175   2e-41
ref|XP_003609438.1| Translocase of chloroplast [Medicago truncat...   166   7e-39
ref|XP_003541485.1| PREDICTED: translocase of chloroplast 90, ch...   163   5e-38
ref|XP_003549731.1| PREDICTED: translocase of chloroplast 90, ch...   162   1e-37

>ref|XP_002263521.1| PREDICTED: translocase of chloroplast 90, chloroplastic-like [Vitis
            vinifera]
          Length = 798

 Score =  175 bits (443), Expect = 2e-41
 Identities = 83/121 (68%), Positives = 96/121 (79%)
 Frame = -2

Query: 944  LKHNFTECGFSATSFGNKYFFGAKLEDGISVGKRLKFVINGGRVGSLEEAAYGGSFETTI 765
            LKHN TECGFS TSF NKY  GAKLED IS+GKRLKFV+N G++G LE+ AYGGSF  T+
Sbjct: 641  LKHNLTECGFSMTSFRNKYCVGAKLEDTISIGKRLKFVMNVGQMGGLEQVAYGGSFGATL 700

Query: 764  RGKDYPVRNDKVSLAMTVMSFNNDTVMGGNIQSDFRLGRGTNFSINANINSRKMGQVCIK 585
            RG+DYP R D  SL M ++S N + VM G+IQSDFR  RGT  SINAN+NSRKMGQ+CIK
Sbjct: 701  RGRDYPARKDSASLNMALLSLNKEMVMSGSIQSDFRSSRGTRMSINANLNSRKMGQICIK 760

Query: 584  T 582
            T
Sbjct: 761  T 761


>emb|CAN71551.1| hypothetical protein VITISV_030236 [Vitis vinifera]
          Length = 802

 Score =  175 bits (443), Expect = 2e-41
 Identities = 83/121 (68%), Positives = 96/121 (79%)
 Frame = -2

Query: 944  LKHNFTECGFSATSFGNKYFFGAKLEDGISVGKRLKFVINGGRVGSLEEAAYGGSFETTI 765
            LKHN TECGFS TSF NKY  GAKLED IS+GKRLKFV+N G++G LE+ AYGGSF  T+
Sbjct: 645  LKHNLTECGFSMTSFRNKYCVGAKLEDTISIGKRLKFVMNVGQMGGLEQVAYGGSFGATL 704

Query: 764  RGKDYPVRNDKVSLAMTVMSFNNDTVMGGNIQSDFRLGRGTNFSINANINSRKMGQVCIK 585
            RG+DYP R D  SL M ++S N + VM G+IQSDFR  RGT  SINAN+NSRKMGQ+CIK
Sbjct: 705  RGRDYPARKDSASLNMALLSLNKEMVMSGSIQSDFRSSRGTRMSINANLNSRKMGQICIK 764

Query: 584  T 582
            T
Sbjct: 765  T 765


>ref|XP_003609438.1| Translocase of chloroplast [Medicago truncatula]
            gi|355510493|gb|AES91635.1| Translocase of chloroplast
            [Medicago truncatula]
          Length = 835

 Score =  166 bits (420), Expect = 7e-39
 Identities = 74/121 (61%), Positives = 96/121 (79%)
 Frame = -2

Query: 944  LKHNFTECGFSATSFGNKYFFGAKLEDGISVGKRLKFVINGGRVGSLEEAAYGGSFETTI 765
            +KHN  +CG S TSFG KY+ GAKLED + +GKRLKFVIN GR+    + A+GGSFE  +
Sbjct: 689  IKHNIADCGVSLTSFGKKYYVGAKLEDTLLIGKRLKFVINAGRMEGQGQVAHGGSFEACL 748

Query: 764  RGKDYPVRNDKVSLAMTVMSFNNDTVMGGNIQSDFRLGRGTNFSINANINSRKMGQVCIK 585
            RG+DYP+RND +SL MTV+SFN +TV+ GN+QS+FRL R    +++AN+NSRKMGQ+CIK
Sbjct: 749  RGEDYPIRNDNLSLTMTVLSFNKETVLSGNLQSEFRLSRSLKATVSANLNSRKMGQICIK 808

Query: 584  T 582
            T
Sbjct: 809  T 809


>ref|XP_003541485.1| PREDICTED: translocase of chloroplast 90, chloroplastic-like
           [Glycine max]
          Length = 795

 Score =  163 bits (413), Expect = 5e-38
 Identities = 74/120 (61%), Positives = 94/120 (78%)
 Frame = -2

Query: 944 LKHNFTECGFSATSFGNKYFFGAKLEDGISVGKRLKFVINGGRVGSLEEAAYGGSFETTI 765
           +KHN  +CG S TSF  KY+ GAKLED + VGKRLKFV+N GR+    + AYGGSFE  +
Sbjct: 640 IKHNIADCGVSLTSFAKKYYVGAKLEDTVFVGKRLKFVLNAGRMEGAGQMAYGGSFEANL 699

Query: 764 RGKDYPVRNDKVSLAMTVMSFNNDTVMGGNIQSDFRLGRGTNFSINANINSRKMGQVCIK 585
           RG+DYPVRND VSL MTV+SFN + V+ G++QS+FRL R +  S++AN+NSRKMGQ+CIK
Sbjct: 700 RGEDYPVRNDNVSLTMTVLSFNKEMVLSGSLQSEFRLSRSSKASVSANLNSRKMGQICIK 759


>ref|XP_003549731.1| PREDICTED: translocase of chloroplast 90, chloroplastic-like [Glycine
            max]
          Length = 796

 Score =  162 bits (410), Expect = 1e-37
 Identities = 74/120 (61%), Positives = 94/120 (78%)
 Frame = -2

Query: 944  LKHNFTECGFSATSFGNKYFFGAKLEDGISVGKRLKFVINGGRVGSLEEAAYGGSFETTI 765
            +KHN  +CG S TSF  KY+ GAKLED + VGKRLKFV+N GR+    + AYGGSFE  +
Sbjct: 641  IKHNIADCGVSLTSFVKKYYVGAKLEDTVFVGKRLKFVLNAGRMEGAGQMAYGGSFEANL 700

Query: 764  RGKDYPVRNDKVSLAMTVMSFNNDTVMGGNIQSDFRLGRGTNFSINANINSRKMGQVCIK 585
            RG+DYPVRND VSL MTV+SFN + V+ G++QS+FRL R +  S++AN+NSRKMGQ+CIK
Sbjct: 701  RGEDYPVRNDNVSLTMTVLSFNKEMVLSGSLQSEFRLSRSSKASVSANLNSRKMGQICIK 760


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