BLASTX nr result

ID: Bupleurum21_contig00021908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021908
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...   263   8e-68
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...   261   3e-67
gb|ACY69610.1| TIR-NBS-LRR resistance-like protein RGC151 [Helia...   254   2e-65
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...   225   1e-56
ref|XP_002325283.1| predicted protein [Populus trichocarpa] gi|2...   199   1e-48

>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score =  263 bits (671), Expect = 8e-68
 Identities = 149/365 (40%), Positives = 218/365 (59%), Gaps = 29/365 (7%)
 Frame = +1

Query: 100  SSNDKDFETDAFARMQQLKLLKLNYVKLTGSYKDFPKRLRWLCWRGFSLASIPSELYLES 279
            +S    F T AF +M +LKLL LNYV+L+  YK FPK L WLCWRGFSL ++P++L L+ 
Sbjct: 588  TSPTNSFSTKAFEKMVRLKLLNLNYVELSEGYKKFPKGLVWLCWRGFSLNALPTDLCLDK 647

Query: 280  LVHLDMQNTSLRQVWKGSKYLPSLKVLNLSHSKWLARTPDFKGVPNLEKLILKSCVSLSS 459
            LV LDM+N++L+ +WKG ++L  LKVLNLSHS  L RTP+F G+P LEKL+LK C  L  
Sbjct: 648  LVALDMRNSNLKYLWKGIRFLVELKVLNLSHSHGLVRTPNFTGLPTLEKLVLKDCKDLVD 707

Query: 460  ICASVGSIKGLVLLDVESCKSLRELPENLSCLRFLQTLNILGCSSLCKFPKWISELESLK 639
            +  S+G +  L++ +++ CK+L++LP  ++ L  L+ L + GC +L + PK +  L+SL+
Sbjct: 708  VDKSIGGLDKLIIFNLKDCKNLKKLPVEITMLHSLEELILSGCLNLVELPKDLENLQSLR 767

Query: 640  DFYADGIGATALLSLTKE-----------------LNQW--------PLPRSLVELSLND 744
              + DGI    + S+T++                 L +W         LPR LV LSL D
Sbjct: 768  VLHLDGIPMNQVNSITEDFKELSLSLQHLTSRSWLLQRWAKSRFSLSSLPRFLVSLSLAD 827

Query: 745  CKLTDSSFPVNLGNLISLKELNLSLNLIQTVPQCVKTLSQLETIDLTYCPKLKSVVGLPS 924
            C L+D+  P +L  L SL+ LNLS N  + +P+ + +L  L ++ L  C  LKS+  LP+
Sbjct: 828  CCLSDNVIPGDLSCLPSLEYLNLSGNPFRFLPESINSLGMLHSLVLDRCISLKSIPELPT 887

Query: 925  TVRQLWVTHSNSLEKIGSIP----ILTLYSSNCESLAEVEGGFKSVTLQYADEQITRSLG 1092
             +  L      SLE+I ++P     L L    C+SL EV+G FK   +   + QI +S+G
Sbjct: 888  DLNSLKAEDCTSLERITNLPNLLKSLNLEIFGCDSLVEVQGLFKLEPVGNINTQILKSVG 947

Query: 1093 FSNLE 1107
              NLE
Sbjct: 948  LINLE 952


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score =  261 bits (666), Expect = 3e-67
 Identities = 155/377 (41%), Positives = 224/377 (59%), Gaps = 24/377 (6%)
 Frame = +1

Query: 46   KRRASSLFTWHPVNYNV----RSSNDKDFETDAFARMQQLKLLKLNYVKLTGSYKDFPKR 213
            KR     F+W P    +      SN+  FET AFA+M+QLKLL+LNYVKL G Y+ FP+ 
Sbjct: 568  KRSRLGFFSWQPAEVGLIPPFPMSNEVVFETKAFAKMRQLKLLQLNYVKLDGRYEHFPRN 627

Query: 214  LRWLCWRGFSLASIPSELYLESLVHLDMQNTSLRQVWKGSKYLPSLKVLNLSHSKWLART 393
            L WLCW GF + SIP +L LE+LV LDM+ ++L+  W G++ L  LK+L+ SHS  L  T
Sbjct: 628  LIWLCWHGFPVKSIPLKLCLENLVVLDMRYSNLKHAWIGARGLKQLKILDFSHSYGLVST 687

Query: 394  PDFKGVPNLEKLILKSCVSLSSICASVGSIKGLVLLDVESCKSLRELPENLSCLRFLQTL 573
            PD  G+PNLE+L LKSC++L  +  S+ +++ LVLL+++ CK LR+LP  +  LR L+ L
Sbjct: 688  PDLSGLPNLERLKLKSCINLVEVHKSIENLEKLVLLNLKDCKRLRKLPRKIVLLRSLEKL 747

Query: 574  NILGCSSLCKFPKWISELESLKDFYADGIGATALLSLTKELNQWP--------------- 708
             + GCS L K    + ++ESLK  + DG       + +++L  W                
Sbjct: 748  ILSGCSELDKLSSELRKMESLKVLHMDGF--KHYTAKSRQLTFWSWLSRRQGMDSSLALT 805

Query: 709  -LPRSLVELSLNDCKLTDSSFPVNLGNLISLKELNLSLNLIQTVPQCVKTLSQLETIDLT 885
             LP SL  LSL DC L+D +  V+L  L SLK LNLS N I  +P+ +  L++LE++ L 
Sbjct: 806  FLPCSLDHLSLADCDLSDDT--VDLSCLSSLKCLNLSGNSISCLPKTISGLTKLESLVLD 863

Query: 886  YCPKLKSVVGLPSTVRQLWVTHSNSLEKIGSIP----ILTLYSSNCESLAEVEGGFKSVT 1053
             C  L+S+  LP+++R+L   +  SLE+I ++P     L L  + CE L EV+G FK   
Sbjct: 864  NCRSLQSLSELPASLRELNAENCTSLERITNLPNLMTSLRLNLAGCEQLVEVQGFFKLEP 923

Query: 1054 LQYADEQITRSLGFSNL 1104
            +   D+++   LG  NL
Sbjct: 924  INNHDKEMANMLGLFNL 940


>gb|ACY69610.1| TIR-NBS-LRR resistance-like protein RGC151 [Helianthus annuus]
          Length = 1021

 Score =  254 bits (650), Expect = 2e-65
 Identities = 145/350 (41%), Positives = 216/350 (61%), Gaps = 11/350 (3%)
 Frame = +1

Query: 94   VRSSNDK---DFETDAFARMQQLKLLKLNYVKLTGSYKDFPKRLRWLCWRGFSLASIPSE 264
            +RSS+ K   DFET A + M+ LKLL+LNYV+L+GSYK+FP  +RWLC  GF L+ IPS+
Sbjct: 608  IRSSSRKTKGDFETLALSEMRNLKLLQLNYVQLSGSYKNFPHGIRWLCMHGFPLSYIPSD 667

Query: 265  LYLESLVHLDMQNTSLRQVWKGSKYLPSLKVLNLSHSKWLARTPDFKGVPNLEKLILKSC 444
            L +E+LV LD+ N+ L Q+WK  K L SLK LNLS+   L R   F G+P L++L L  C
Sbjct: 668  LQMENLVALDLSNSKLLQLWKKPKLLRSLKFLNLSNCHELVRVGHFSGLPLLKRLTLARC 727

Query: 445  VSLSSICASVGSIKGLVLLDVESCKSLRELPENLSCLRFLQTLNILGCSSLCKFPKWISE 624
             SL  +C S+G+ + L +LD+  C  L+ELP ++  L+ L  L + GCS+L ++P  + E
Sbjct: 728  TSLIEVCESIGTCQKLEILDLSECNKLKELPRSIGKLKSLTQLLVDGCSNLGEYPAEMKE 787

Query: 625  LESLK----DFYADGIGATALLSLTKELNQWPLPRSLVELSLNDCKLTDSSFPVNLGNLI 792
            +ESL+    +  + G  ++ ++  T E     LPRSLV LSL +C L + SFP++  NL 
Sbjct: 788  MESLEADNVNMKSHGSSSSTMVPRTPESFASSLPRSLVTLSLKNCNLYNESFPMDFSNLP 847

Query: 793  SLKELNLSLNLIQTVPQCVKTLSQLETIDLTYCPKLKSVVGLPSTVRQLWVTHSNSLEKI 972
             LK+L L  N + ++P CVK+LS+LET+   +C  LK+V+  P  ++QL +   +SLEK 
Sbjct: 848  MLKKLYLDGNPMDSMPDCVKSLSRLETLSFCWCRNLKTVLCAPIQLKQLDILFCDSLEKT 907

Query: 973  GSIP----ILTLYSSNCESLAEVEGGFKSVTLQYADEQITRSLGFSNLEF 1110
               P    I  +  +   +L E++   K   L   DE++  SLG+ N+ +
Sbjct: 908  TFHPEKSAIPRVLCNRSVTLTEIQHILKIQALSEIDEEVLCSLGWINIAY 957


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score =  225 bits (574), Expect = 1e-56
 Identities = 126/333 (37%), Positives = 193/333 (57%), Gaps = 4/333 (1%)
 Frame = +1

Query: 115  DFETDAFARMQQLKLLKLNYVKLTGSYKDFPKRLRWLCWRGFSLASIPSELYLESLVHLD 294
            D +T AF  M +LKLL+LN VKL+G  +DFPK L WL WRGF L  IP+  +L+ L  LD
Sbjct: 557  DLKTKAFGEMNKLKLLRLNCVKLSGDCEDFPKGLVWLFWRGFPLRCIPNNFHLDKLAVLD 616

Query: 295  MQNTSLRQVWKGSKYLPSLKVLNLSHSKWLARTPDFKGVPNLEKLILKSCVSLSSICASV 474
            M+ +SL  VWKG++ L +LK+LNLSHS  L +TP+F G+P+LE+L LK CV+L  +  S+
Sbjct: 617  MRKSSLINVWKGTRLLVALKILNLSHSHCLVKTPNFMGLPSLERLKLKDCVNLIDLDESI 676

Query: 475  GSIKGLVLLDVESCKSLRELPENLSCLRFLQTLNILGCSSLCKFPKWISELESLKDFYAD 654
            G ++ L++LD+  C++++ LP  +  L  L+ LN+ GCS L + P+ + +++SLK  YAD
Sbjct: 677  GYLRRLIVLDLRGCRNVKRLPVEIGMLESLEKLNLCGCSKLDQLPEEMRKMQSLKVLYAD 736

Query: 655  GIGATALLSLTKELNQWPLPRSLVELSLNDCKLTDSSFPVNLGNLISLKELNLSLNLIQT 834
                                         DC L+D + P +L  L SL+ L+L  N I +
Sbjct: 737  A----------------------------DCNLSDVAIPNDLRCLRSLESLDLKGNPIYS 768

Query: 835  VPQCVKTLSQLETIDLTYCPKLKSVVGLPSTVRQLWVTHSNSLEKIGSIP----ILTLYS 1002
            +P+ + +L+ L+ + L  C +L+S+  LP+++ +L      SLE+I ++P     L +  
Sbjct: 769  IPESINSLTTLQYLCLDKCTRLQSLPQLPTSLEELKAEGCTSLERITNLPNLLSTLQVEL 828

Query: 1003 SNCESLAEVEGGFKSVTLQYADEQITRSLGFSN 1101
              C  L EV+G FK       D ++   LG  N
Sbjct: 829  FGCGQLVEVQGLFKLEPTINMDIEMMNGLGLHN 861


>ref|XP_002325283.1| predicted protein [Populus trichocarpa] gi|222862158|gb|EEE99664.1|
            predicted protein [Populus trichocarpa]
          Length = 601

 Score =  199 bits (506), Expect = 1e-48
 Identities = 122/350 (34%), Positives = 191/350 (54%), Gaps = 52/350 (14%)
 Frame = +1

Query: 142  MQQLKLLKLNYVKLTGSYKDFPKRLRWLCWRGFSLASIPSELYLESLVHLDMQNTSLRQV 321
            M++LKLL++    L GSY   PK L WLCW G  L S+PS+ +L  LV LDMQ +++R++
Sbjct: 1    MRRLKLLQIKGANLVGSYSLLPKELIWLCWFGCPLKSLPSDFHLNDLVILDMQESNVRKL 60

Query: 322  WKGSKYLPSLKVLNLSHSKWLARTPDFKGVPNLEKLILKSCVSLSSICASVGSIKGLVLL 501
            WKG+K L  LK+LNLS+SK+L  TP+F+ +  LE+LIL  C SL  +  S+G++K LVLL
Sbjct: 61   WKGTKILNKLKILNLSYSKYLDETPNFRELSCLERLILTGCTSLVKVHQSIGNLKSLVLL 120

Query: 502  DVESCKSLRELPENLSCLRFLQTLNILGCSSLCKFPKWISELESLKDFYADG-------I 660
            ++  C SL+ LPE++  L+ LQTLN+  C  L K P+ + ++ESL + +  G        
Sbjct: 121  NLHYCDSLKTLPESMGNLKSLQTLNVTQCRQLEKLPESLGDIESLTELFTKGTAIKQLPT 180

Query: 661  GATALLSLTK----------------------ELNQWPLPR-----------------SL 723
             A  L  LTK                        + W  PR                 SL
Sbjct: 181  SARYLKKLTKLSFGGYNKVFYSPDLPSKSRFSRFSLWLSPRNCSSSNAMLPAFFNSFSSL 240

Query: 724  VELSLNDCKLTDSSFPVNLGNLISLKELNLSLNLIQTVPQCVKTLSQLETIDLTYCPKLK 903
             EL+L+   L++++  ++LG+L  L++L+LS N    +P  +  L +L+ + +  C  L 
Sbjct: 241  KELNLSYAGLSEATSSIDLGSLSFLEDLDLSGNKFFNLPSGISLLPKLQCLRVEKCSNLL 300

Query: 904  SVVGLPSTVRQLWVTHSNSLEKIGS------IPILTLYSSNCESLAEVEG 1035
            S+  LPS+V  L +    S+E++ +      +P+L +    C +L E++G
Sbjct: 301  SIPELPSSVLFLSINDCTSIERVSAPLQHERLPLLNV--KGCRNLIEIQG 348


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