BLASTX nr result

ID: Bupleurum21_contig00021898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00021898
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]               141   1e-31
emb|CAK22424.1| matrix attachment region binding protein [Beta v...   139   3e-31
ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-li...   132   7e-29
emb|CBI34244.3| unnamed protein product [Vitis vinifera]              132   7e-29
emb|CAN73717.1| hypothetical protein VITISV_038844 [Vitis vinifera]   132   7e-29

>dbj|BAB41076.1| MAR-binding protein [Nicotiana tabacum]
          Length = 555

 Score =  141 bits (355), Expect = 1e-31
 Identities = 73/114 (64%), Positives = 87/114 (76%)
 Frame = +2

Query: 74  TAVVLDTAEQETNSKPSKGLWKFLRAHCKGETLGIADSKLGNAIKERLQIVCAHNNSFME 253
           T+  L  A    +SKPSKGL KFL+AHC GETLG+ADSKLGNAIKE+LQI C HNN+ ME
Sbjct: 53  TSEALSAATLLIDSKPSKGLRKFLKAHCDGETLGVADSKLGNAIKEKLQIDCVHNNAVME 112

Query: 254 LMRGVRSQLTELITGLGSQDLAPMSLGLSRSAEMIWSKFNAVTIWKLLSRVVAV 415
           LMRGVRSQLTELITGLGSQDLAPMSLGLS S      KF+   +  ++ + +++
Sbjct: 113 LMRGVRSQLTELITGLGSQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIVQAISL 166


>emb|CAK22424.1| matrix attachment region binding protein [Beta vulgaris]
          Length = 572

 Score =  139 bits (351), Expect = 3e-31
 Identities = 72/114 (63%), Positives = 86/114 (75%)
 Frame = +2

Query: 74  TAVVLDTAEQETNSKPSKGLWKFLRAHCKGETLGIADSKLGNAIKERLQIVCAHNNSFME 253
           TA  L  A    +SKPSKGL KFL+AHCKGETL +ADSKLGNAIKE+LQI C HNNS ME
Sbjct: 53  TAEALSAATLLIDSKPSKGLRKFLKAHCKGETLAVADSKLGNAIKEKLQIECVHNNSVME 112

Query: 254 LMRGVRSQLTELITGLGSQDLAPMSLGLSRSAEMIWSKFNAVTIWKLLSRVVAV 415
           LMRGVRSQL+ELI+GLG+QDLAPMSLGLS S      KF+   +  ++ + + +
Sbjct: 113 LMRGVRSQLSELISGLGAQDLAPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGL 166


>ref|XP_002273273.2| PREDICTED: probable nucleolar protein 5-2-like [Vitis vinifera]
          Length = 573

 Score =  132 bits (331), Expect = 7e-29
 Identities = 69/100 (69%), Positives = 75/100 (75%)
 Frame = +2

Query: 74  TAVVLDTAEQETNSKPSKGLWKFLRAHCKGETLGIADSKLGNAIKERLQIVCAHNNSFME 253
           T   L  A    +SKPSKGL KFLR HC GETL +ADSKLGNAIKE+LQI C HNN+ ME
Sbjct: 53  TTEALSAATLLIDSKPSKGLRKFLRVHCDGETLAVADSKLGNAIKEKLQIECVHNNAVME 112

Query: 254 LMRGVRSQLTELITGLGSQDLAPMSLGLSRSAEMIWSKFN 373
           LMRGVRSQLTELI+GL  QDLAPMSLGLS S      KF+
Sbjct: 113 LMRGVRSQLTELISGLAVQDLAPMSLGLSHSLSRYKLKFS 152


>emb|CBI34244.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  132 bits (331), Expect = 7e-29
 Identities = 69/100 (69%), Positives = 75/100 (75%)
 Frame = +2

Query: 74  TAVVLDTAEQETNSKPSKGLWKFLRAHCKGETLGIADSKLGNAIKERLQIVCAHNNSFME 253
           T   L  A    +SKPSKGL KFLR HC GETL +ADSKLGNAIKE+LQI C HNN+ ME
Sbjct: 53  TTEALSAATLLIDSKPSKGLRKFLRVHCDGETLAVADSKLGNAIKEKLQIECVHNNAVME 112

Query: 254 LMRGVRSQLTELITGLGSQDLAPMSLGLSRSAEMIWSKFN 373
           LMRGVRSQLTELI+GL  QDLAPMSLGLS S      KF+
Sbjct: 113 LMRGVRSQLTELISGLAVQDLAPMSLGLSHSLSRYKLKFS 152


>emb|CAN73717.1| hypothetical protein VITISV_038844 [Vitis vinifera]
          Length = 472

 Score =  132 bits (331), Expect = 7e-29
 Identities = 69/100 (69%), Positives = 75/100 (75%)
 Frame = +2

Query: 74  TAVVLDTAEQETNSKPSKGLWKFLRAHCKGETLGIADSKLGNAIKERLQIVCAHNNSFME 253
           T   L  A    +SKPSKGL KFLR HC GETL +ADSKLGNAIKE+LQI C HNN+ ME
Sbjct: 53  TTEALSAATLLIDSKPSKGLRKFLRVHCDGETLAVADSKLGNAIKEKLQIECVHNNAVME 112

Query: 254 LMRGVRSQLTELITGLGSQDLAPMSLGLSRSAEMIWSKFN 373
           LMRGVRSQLTELI+GL  QDLAPMSLGLS S      KF+
Sbjct: 113 LMRGVRSQLTELISGLAVQDLAPMSLGLSHSLSRYKLKFS 152


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